Ficedula albicollis (collared flycatcher): 101807267
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Entry
101807267 CDS
T02815
Symbol
TDRD12
Name
(RefSeq) tudor domain containing 12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101807267 (TDRD12)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
101807267 (TDRD12)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101807267 (TDRD12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
101807267
NCBI-ProteinID:
XP_005052751
LinkDB
All DBs
Position
11:16604767..16627825
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AA seq
1248 aa
AA seq
DB search
MEVVVLKVEDPSCFWIAVKGCMQGLVSETVYENLNAEMKQFYSSYKGADEVKAEEVEKGQ
VYVVFSEELKCWCRALVESVQCHANGCQLRCFLVDYAKYCYVASENIRVLAGAFAKIPYR
AKKCRLHCTKPLTLRIDYCEDTAKIGPAKRWDTAAIQHFRKLLEEATEVKATIQAVEDEV
LEVFLYVTIKDEKICVNDDLVAKHFAHYKEAEGTAGSSPDDSDDEVSLNAEYVPVEFVGP
TFLARPKLPFGKEVSPHLEPDLAGCNSALEKGSQRSQTVLKDSTVPVVSMVPGVPSKEDK
AVETERLPQSLSSNSLQTHTVEDDQQSFKSAGKEKNFVFLSKKIEPSLVLETAPLSDGLK
KELVWNKFSGPTFTESYCWPPIAWGCDVVAISHQGNDPLLYIPPVLTLLQLDSDYQALPN
MSGPLALILCPGWKKAQLVFDLLKTYRKGCRRRLHPMLIILGQNKEAASQVEIQGCEVVV
TTPYNLLRLLEHNTGFLRRLCHLVLDETEVLLSDTTEQVFSVLDCYKKATAQAQGNLPHQ
IIAVGTRWNKHITPLIKEFMNDPHIVITVIEEAALFGNVQQVVQPCMNSNRTAELLKILD
FTQRNLQKVLVFTDSVTEVEMIHKALKNNSVVSLKKHKESKCNARCVLERWRKMHSSGTP
AVLVLTDDCLQSLGIRDATCVIHFSFPSLGVFGQRLQSMSDNFCTGDSAVDQEHTKAKSV
ILLTENSSCHAPEILHYLKHAEAEIPEELYSLNARVLESEEKEKSSRPLCASLKTFGICR
NRTECPYRHQINLSIDMAQNIADEMIETPERVTILPLVVMNATNYFGRIIKKQKDQYTVL
AEQMNDYFKVPEHRISVNTMEESMFYGLREGTNCHRVQVVETPAKDEENICKVTIKYIDE
GRTSQVNSDQLLHLPVEFQSLPPQAVEIVVCRVKPIDNEVEWNPKVTDHINHKIKGKLHH
AKVVHTLGRTVWVDPMVGVTNLPMIKIWINEYNIRTEILSTGLGTDNPEHVEEIQKLCRQ
IAVLDHAQSSERLPAEAEPAVEKFGTSVPAVLIRSTEEDTAGPEEASSPQDTSIQESSAG
SCDSSVTLPSNDVVQAKEAEDSTVHQQKSYHPQIKWLQDKMTVTLKVQILRAADSKCEFS
RGKVAFSAYSEGKLYVADLELYQSVIAEKSTCVIKDTEAVILLVKEKKGAWCKLLKNKNV
HVSLDFEHWEESEDERPFTVDSAKLSYPPAGSEDWFESSEDSDTESDE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgtggtattaaaggttgaagatccaagttgcttttggattgctgtgaaagga
tgcatgcagggcctagtcagtgaaactgtgtatgaaaacctgaatgctgaaatgaaacag
ttttatagcagttacaaaggtgcagatgaagtaaaagcagaggaggtagaaaaaggccag
gtttatgtggttttcagtgaggagctcaagtgctggtgtagggcactggtcgagtcagtc
cagtgccacgcaaatggttgccagctcagatgtttccttgtggattatgccaagtactgt
tatgttgcatcagagaacattcgggttttagcaggagcatttgcaaagatcccatacaga
gcaaagaagtgtcggctgcactgcacaaagccactgacactgcgtattgactactgtgag
gacactgccaaaataggaccagccaaaagatgggatactgctgctatccagcattttcga
aaacttcttgaagaggctaccgaggttaaagccacaatacaagcagtagaagatgaagtg
ttagaagtatttctttatgtaaccataaaagatgagaagatctgtgttaatgatgatctg
gttgcaaagcacttcgctcattacaaggaagctgaagggactgcagggagttctccagat
gattctgatgatgaagtgtccttaaatgctgagtatgttccagtggagtttgttggtcct
acatttcttgccaggccaaaactgccctttgggaaggaggtgtcaccacatcttgagcca
gatcttgctggttgtaattctgctcttgaaaagggatcccaaaggtcacaaacagttcta
aaggacagtactgtgcctgtggtcagcatggtgccaggtgtgccttccaaggaagataaa
gctgttgaaacagagaggcttccacagtccttaagttcaaattccctccagacacacaca
gttgaagatgaccaacagagttttaaaagtgctgggaaagaaaaaaactttgtgttcctg
agcaagaaaatcgagccatcattagttttggaaacagcaccactttctgatggtctgaaa
aaggaacttgtttggaacaagttttcaggccctaccttcaccgagtcctactgttggcca
ccaatagcttggggatgtgatgtcgttgccatctcccatcagggaaatgatcccttatta
tatattccaccagttcttacacttctgcagttggacagtgactaccaagccttgccaaac
atgagtggaccactagcactgattttatgtcctggatggaagaaggcacaacttgttttt
gacctgctgaaaacatacaggaaaggctgcaggcggcgccttcatccaatgctgataatc
cttgggcagaacaaggaagcagccagccaagtggaaatccaaggctgtgaagtagtagtg
actacaccttacaacctcctgagactgctggaacacaacactgggtttttgcgtaggctt
tgccatcttgttcttgatgagactgaggtgctgctctctgacactactgaacaggtgttt
tctgtactggattgttacaagaaagccactgctcaggcacaggggaatctgccacatcag
atcattgctgtgggaactcggtggaataaacatatcacacccttgataaaggagttcatg
aatgatcctcacattgtgataacagttattgaagaagctgccctctttggaaatgtgcaa
caggtggtgcagccctgcatgaacagcaacagaactgctgagttactcaaaatactggat
tttacccagagaaatcttcagaaagtgctggtattcactgactcagtaactgaagtagag
atgatacataaggcactgaagaacaactcagtggtttccttgaaaaagcataaggagagc
aagtgtaatgctagatgtgtcttggagaggtggagaaaaatgcacagttctggcactcct
gctgtgttagttttaacagatgactgcctgcagtccttgggaatcagagatgcaacttgt
gtgatccatttcagtttcccatctctgggagtctttgggcagcgcctgcaaagcatgagt
gacaacttctgcactggggattctgctgtagatcaggaacatactaaggccaagtcagtc
attctgctgacagagaacagttcctgtcatgcacctgaaattctgcactatttaaagcat
gcagaagctgaaattccagaagaactctattctttgaatgccagggtgctggaatctgag
gaaaaggagaaatcttcaaggcctctgtgtgcttctcttaaaacatttggtatttgcagg
aacagaactgagtgtccatatcgtcatcaaattaatttatcaatagacatggcccaaaat
atcgcagatgaaatgatagaaacacctgaacgtgtgacaatcctgcctctcgtcgttatg
aatgcaacaaactattttggtcgaataatcaagaaacaaaaggaccaatatacagttctt
gctgaacaaatgaatgattatttcaaggtaccagagcataggatttcagttaataccatg
gaggagtcaatgttctatgggttacgggaaggtactaattgccacagggttcaggtggta
gagactccagcaaaagatgaagaaaacatctgtaaggtcacaattaaatatatagatgaa
ggcaggacaagtcaagttaatagtgatcagctgcttcacttacctgtagagtttcagagt
ctgccacctcaggctgtggaaattgtagtttgtagagtaaaacccattgataatgaagtt
gaatggaatccaaaggtgactgatcacattaatcacaaaattaaaggaaaacttcatcat
gcaaaagtggtgcataccttgggaaggacagtctgggttgacccaatggttggggttacc
aatcttcccatgatcaagatatggatcaatgagtacaacattcgaactgagattttgtcg
acgggtttgggaactgacaatcctgaacatgtagaagaaattcagaagctgtgcagacag
atagcagttttggatcatgcacagagctcggagcgtttacccgctgaggccgagcctgct
gttgaaaaatttggaacttcagtaccggctgtgttaataagaagcacagaagaggacaca
gctggtccagaggaggcgtccagtccacaggatacatcgatacaggaaagttctgctgga
agctgtgacagttcagtgactcttccaagcaatgatgtagtacaagcaaaagaagcagaa
gactctactgtgcatcagcagaagagctatcatccacaaatcaagtggcttcaagataaa
atgacggtgacactgaaggtacaaatactgagggcagctgacagtaaatgtgagttctct
agagggaaggtggctttcagtgcttattcagaaggcaagctttatgtggctgacctggag
ctttatcagtcagtaattgcagagaagtccacatgtgtgattaaggatacagaagctgtg
atcttactggtaaaagagaaaaaaggagcatggtgcaaattactgaagaacaagaatgtt
cacgtgtccttagattttgaacactgggaagagtcggaagatgaaagaccttttacagtt
gattctgcaaaactgagttaccctcctgcaggatctgaggactggtttgagtcctcagaa
gacagcgatacagaaagtgatgaataa
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