KEGG   Ficedula albicollis (collared flycatcher): 101807349
Entry
101807349         CDS       T02815                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101807349 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fab03400]
    101807349 (APTX)
Enzymes [BR:fab01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     101807349 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     101807349 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     101807349 (APTX)
DNA repair and recombination proteins [BR:fab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101807349 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     101807349 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N Cys_rich_KTR zf-C2H2_4
Other DBs
NCBI-GeneID: 101807349
NCBI-ProteinID: XP_005061136
LinkDB
Position
Z:43197464..43207769
AA seq 344 aa
MRVCWLVGKEQCTQRVKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVNIGKDEVVKMKPGQILHVVNNLYPYTVQFAEESGKTVPKVDKMLHEDTCG
NDDMEPVPRKTMKLEVVDTQGSSINPKLSSTSVSTHEGTSSKKEHLGHWSQGLKSSMQDP
KMQVYKDEKTVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLELLEHMHAVGQKMIEQC
PARESLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNSQDVIEMVR
SKGKVMVKDHTSELLKLPLRCHRCKQQLSTIPQLKEHLKKHWPK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgcgtgtgtgctggctcgtggggaaggagcaatgcactcagcgagtgaaactgccccac
ttggaagccgtggtgattgggcgcggcccagagactgggataacggataagaagtgttca
cggcagcaagttcagttaaaagcagactgtaacaaagggtatgtcacagttaaacagata
ggggtcaacccaactagtgttgatcttgtgaatattggcaaggatgaagtggtgaaaatg
aagccaggccaaattctgcatgttgtgaataacctttacccttacacggtgcaatttgct
gaagagtctgggaaaactgttccaaaagtagacaaaatgctacatgaggacacttgtggg
aatgatgatatggagcctgtgcccagaaaaacaatgaagttggaggtggtggatacacaa
ggcagttctataaatcccaagctaagcagtaccagtgtatctacacatgaaggaacttca
agcaaaaaggaacatttaggacactggagtcagggtctaaagagctccatgcaagatcca
aaaatgcaggtttacaaagatgaaaagactgtagtcatcaaggataaatatcccaaagct
cgttaccactggcttatcttaccatgggaccccatttcaagcctgaagtcagtcaccagg
gaccaccttgaactcctggaacatatgcatgctgttgggcaaaaaatgatcgaacagtgc
cctgccagagagagcctggagttcagactgggttaccatgccatccccagtatgagtcag
ctacatttgcatgtaatcagccaggattttgattctccggccctcaaaaccaaaaagcac
tggaattcttttactacagagtacttcttaaactctcaagatgtgatagagatggtacga
agcaaggggaaagtgatggtgaaagaccatacctctgaacttctcaaacttcccctcaga
tgccatcgctgtaaacaacagctgtccacaatcccacagttaaaggaacatcttaagaaa
cattggccaaaatga

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