KEGG   Ficedula albicollis (collared flycatcher): 101807691
Entry
101807691         CDS       T02815                                 
Symbol
COL4A5
Name
(RefSeq) collagen type IV alpha 5 chain
  KO
K06237  collagen type IV alpha
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab04382  Cornified envelope formation
fab04510  Focal adhesion
fab04512  ECM-receptor interaction
fab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:fab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101807691 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101807691 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101807691 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    101807691 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fab04147]
    101807691 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:fab00536]
    101807691 (COL4A5)
Exosome [BR:fab04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101807691 (COL4A5)
Glycosaminoglycan binding proteins [BR:fab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101807691 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101807691
NCBI-ProteinID: XP_016153731
LinkDB
Position
4A:12321541..12406997
AA seq 1697 aa
MEPRRPSFNLAAGCLVLLLGCWGPQEAAAAACHGCTSLSKCDCSGVKGEKGERGFPGLEG
QPGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPG
PQGIPGCNGTKGERGLPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPG
LPGIPGPPGAMGIPGPIGPPGPPGLTGPPGPPGLSGPKGNMGLNFQGPKGEKGEQGLQGP
PGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPPGPPGLPGGVKGEKGEQGEPGKR
GKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDMGPPGPPGIVVPRPGIDATVGP
KGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVS
IPGQPGVEGPQGPPGPPGPPGPPAPSVAPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDR
GDSCFNCIGTGVTGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGTPGA
PGRPGPKGDPGDVLTSPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVA
FKGEMGIPGDPGIPGLPGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQ
TITEPGVPGPPGPPGRDGDPGLPGDPGQPGQRGLPGMPGAKGEPGIPGIGLPGPPGPKGF
PGTPGLPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGIKGAQGPKGDP
GFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLEGPPGVPGIGGQGPPGSPGPPGPVGPPG
PPGLQGIPGEKGDPGPPGFDIPGPPGDQGAPGYPGPPGLPGPQGSSGPPGRDGIPGLPGA
KGEMGIMGAPGPPGPPGTPGRNGLPGLKGNSGLPGPPGPPGPVGQKGIKGEAGLPGPPGT
VDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDMGLP
GQPGPTGPPGLKGAMGEMGLPGPPGLKGNQGIAGRPGQPGPAGFPGLKGQKGDPGLSSTG
IPGPPGPKGDLGLPGYPGSPGSKGVAGNPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKG
IEGPPGNPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGP
PGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGIPGPPLEGPKGSP
GPPGVPGRPGPSGPPGPPGPEGPRGPPGSGGLKGEKGNPGPPGPPGLTGPKGDQGPPGRQ
GDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPTGPTGLTGSQGLPGPPGPPGLPGTIGRS
IVVKGDPGSPGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERGL
PGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFS
LLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPESMPMS
MEPLTGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAE
GSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKA
GDLRTRISRCQVCMKTT
NT seq 5094 nt   +upstreamnt  +downstreamnt
atggagccgcggcggccgagctttaatctggccgctggctgcctggtgctgctgctgggg
tgctgggggccgcaggaggcggcggcggcggcttgccatggatgtacatctttatccaaa
tgtgattgcagtggagtaaaaggtgaaaagggtgaaaggggattcccgggcttggaagga
cagccaggtttgcctggatttccaggaccagaaggaccacctggtccaagaggctcaaag
ggtgacgatggtcttccaggacctattggacccaaaggaatcagaggaccaccagggctt
cccgggtttccaggaacaccaggacttcctggattgcctggacaagatgggccaccagga
cctcagggtatcccaggatgcaatggaacaaagggagagcgtggactcccaggcagtcca
ggttttcctggtttacaagggcctcctggacctcctggtctgccaggtatgaagggtgaa
gcaggtgaaataattacatccttgctgccaggacagaaaggtgacccaggatttccaggt
cttccggggatacctggcccacctggcgccatgggaataccaggtccaattggccctcca
gggcccccaggtttgacaggacctcctggtccaccagggctgtcaggacccaagggtaat
atgggtttgaatttccaaggacccaaaggtgaaaaaggtgagcaaggtcttcagggacct
ccagggccaccaggacaaattggagaacagaaaagaccaaatgacattgagtttcagaaa
ggagatcagggtattccaggtgatccaggcccaccaggacttcctgggccaccaggccct
cctggtcttcccggtggtgtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaaga
ggaaagcctggcaaagatggagaacctggtcaacctggtagggatggtttacctggtggg
cctggaataaacggtgctccaggaagagatggtgaaaagggtgaaaaaggtgacatgggt
ccccctggtcctcctggaattgttgttccaagaccaggcattgacgcaacagtgggacca
aaaggtagtaaaggattgccaggacttccaggagccaaaggggagcgtgggttctctggt
aggccaggcccacctggcttgccaggatctccagggatcactactgttggacctcctggc
ccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggagtttct
attcctgggcaaccaggagttgagggacctcaaggaccaccaggaccaccaggtccccca
gggccacctgctccatctgttgctcctggtgaagggttatgtgagcaagggccaccaggt
cctccaggaattccaggacaacaaggttttacaggggagcgaggccaaaaaggtgatcga
ggagattcatgcttcaactgcataggaactggagttactggtcctcctggggagagagga
ccaccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaaaag
gggcttcctggattaactggccttgtagggccaccaggctttccaggcaccccaggtgct
cctggcagacctggtcctaaaggagacccaggggatgtcctgacttctccgagaatgaaa
ggtgacaaaggagaccccggcttcccaggacctccgggtctccctggtatagatggcact
cctggacgagatggactgccaggtttgcctggccctaagggcgaacctggaagtgttgca
ttcaaaggagaaatgggtattccaggtgacccagggataccaggtcttcctggagaaaaa
gggcttcctggacctcctggttttggtccacaaggctcacctggtgaaaagggcatccaa
ggtgtatccggccgtccagggcctcctggtgttccaggtccaaaaggtgagcctggccag
actattacagaaccaggagttccaggtccccctggtcctccaggaagagatggtgatcca
ggtcttccaggagatcctggtcagccaggtcagcgtggtttacctggcatgccaggtgca
aagggagagccaggtattcctggcattggacttccaggtccaccaggcccaaagggtttc
ccagggactccaggcctgcctggagctccaggaactccaggtcgccctggtctggatgga
cctcctggaccaccaggtttcccaggacagaagggagaccgtggatttggagttccagga
ccacctgggcccccaggacccccaggcataaaaggagctcaaggacctaaaggtgatcct
ggcttcccaggaaatcctggtctcccaggccgggcaggctttgatggaaccccagggccc
aaaggtgaccctggaccaagtggaccaccaggacttgaaggcccaccaggtgttcctggc
attggtggtcaaggtcctcctggatctccaggacctccaggtcctgttggccccccaggt
cctccagggttgcaaggcattccaggggagaaaggggatccaggtcctccaggcttcgat
attcctggtcctccaggtgaccaaggagctccaggatatccaggaccccctggactacca
gggcctcagggctcatctgggccacctggcagggatggaatacctggacttccaggtgcc
aaaggtgagatgggcatcatgggagcccctggtcctccagggcctccaggaactcctgga
agaaatggtctgcctggcttgaaaggtaatagtggattacctggtccaccagggcctcct
ggaccagtggggcaaaaaggcatcaaaggtgaagcaggtctgccaggtccacccggaaca
gttgatcccaaacagctgggagcaaaaggagaaaaaggcgagccgggtgttccaggtatt
cctggtttatcaggccagaaaggttatcaaggtctcccgggtgacccaggcccaccagga
cttagtggcccaccaggtgtgccaggattgccaggcatcaagggagacatggggcttcct
gggcagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggcctt
ccaggtccccccgggcttaaaggtaaccaaggaatagcaggacgtccagggcagcctggg
cctgcgggatttcctggactgaaagggcagaaaggtgaccctggtctttcaagcactggt
attcctggtccccctggaccaaagggagatcttggcttgcctggatacccaggtagtcca
ggctctaaaggtgtagctggaaatcctggtttgcctggatttccaggcagtccaggtgca
aaaggagaaccaggccttcctggattcccaggaacgccaggaattccaggaccaaaagga
attgagggccctccaggtaatcctggcctgcctggaccacctgggccagtaggtgatatt
ggtcgtcctggccctcctggtccttcaggggaaaagggacaacctggtcgagatggtatc
cctggaccagcgggtcaaaagggtgaaccaggtctgccaggttttgggcgtccaggacct
ccaggactcccaggattgtcagggcaaaaaggagaattggggttacctggcccaccagga
ccccctggacttccaggtctgaagggagaaccaggtttccagggattccctggactgcag
ggtccaccaggtccaccaggaataccaggaccacctctggaaggtcctaaaggtagccct
ggcccaccaggtgttccaggaaggccaggtccctcagggcctccaggtccaccaggccca
gaaggtccacgagggccaccaggcagtggaggacttaaaggggaaaaagggaacccaggt
ccacctggtccacctggcctgactggtccaaagggagatcaaggaccacctggacgccag
ggggatcctggtcgtccgggcctgaatggaatgaagggtgaccctggggttccaggtgtt
ccaggattcccaggtatgaagggtcccactggacccacaggacccactggcctcacaggc
agccagggactgccaggcccaccaggtccaccaggtttaccaggtaccattggacgcagc
attgttgtcaaaggtgatcctggttccccgggtcctccaggacagcctgggtccaaaggg
ccacctggattgccagggccacagggattgccaggtccaattggtcttcctggtgaccca
gggagagatggacttcctggttttgatggtccagcaggacgaaaaggagagaggggtctt
ccaggccaaccaggttcacggggaatacaaggacctcctggtcctgatggcttacaaggc
ccacctggtcctcctggaacagcttctgttgctcatggattccttataactcggcacagc
cagacaagggatacaccactatgtccacaaggaacatcaagaatatatgatggattctct
cttctatacgtgcaaggaaatgagagagcacatggccaggatttgggtactgctgggagc
tgtcttagacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtttgtaac
tttgcatcaaggaatgactattcctactggctgtcaaccccagagtcgatgccgatgagc
atggagccactgactgggcaaagcatccagccattcattagccgatgtgttgtgtgtgaa
gctcctgctatggtgatagctgtccacagtcaaaccattcagatcccttcatgtcctcca
ggctgggactccctctggattggttactctttcatgatgcatacgagtgctggagcagag
ggctctggacaggccttggcatcacctggatcctgtttggaagaattccgctcagcaccg
ttcattgaatgccatggtcggggcacctgtaattattatgccaattcatacagtttctgg
ctggcaactgtagaggtgtcagaaatgttcagcaaacctcagtctgagacactgaaagct
ggagacttgaggacgcgtattagtcgttgtcaagtttgcatgaagacaacgtaa

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