Ficedula albicollis (collared flycatcher): 101807692
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Entry
101807692 CDS
T02815
Symbol
IGHMBP2
Name
(RefSeq) immunoglobulin mu binding protein 2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101807692 (IGHMBP2)
03012 Translation factors [BR:
fab03012
]
101807692 (IGHMBP2)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101807692 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
101807692 (IGHMBP2)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Other ribosome biogenesis factors
101807692 (IGHMBP2)
Translation factors [BR:
fab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101807692 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
SMUBP-2_HCS1_1B
AAA_12
AAA_30
R3H
AAA_19
zf-AN1
Helicase_RecD
ResIII
Viral_helicase1
nSTAND3
DEAD
AAA_25
AAA_22
Flavi_DEAD
AAA_16
UvrD-helicase
T2SSE
SLFN-g3_helicase
IstB_IS21
ABC_tran
AAA
DAP3
PhoH
NTPase_1
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
101807692
NCBI-ProteinID:
XP_005046651
LinkDB
All DBs
Position
5:9035597..9060635
Genome browser
AA seq
977 aa
AA seq
DB search
MAAEAAERHLGLLRDEREAELAQSRAWQESVSLKELQRRGVCLLKLQVSSQRTGLYGRLL
VTFQPRKWDSDTELPSNSFGPGDIVGLYESAGQGDPLCTGVVTRVTPKAVTVALEEPRDG
ELALDHERSFRLLKLANDVTYNRLKRALTALKQYRGGPASDLIDVLFFASAPRAFPETKP
LEFLNASLDESQREAVSFSLAQRELAIIHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPS
NVAVDNLVERLAGCRARLLRLGHPARLLPPTQRHCLDAALARGDSARIVADIRRDIDRAW
AKTKKAQDKGERSHFLGEIKILRKELKEREEAAMAAALSQANVVLATNTGASSDGPLKLL
PETHFDLVVIDECAQALEASCWIPLLRAPKCILAGDHKQLPPTIISHRAAAAGLSLSLME
RLAERCGERAVRMLTLQYRMHRHIMAWASSELYGGRLRAHPSVAQHLLRDLPGVASTEET
STPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLVGMHVQALVDAGVKAKDIAVVAPYNLQ
VDMLRQHLCHSHPELEIKSVDGFQGREKEAVILSFVRSNRKGKPSLLEHCSLGNGEEAFA
PVTSCPVGPFLRRLLDHLGQHGLVRSAFEYLDDLVPQNYPGEGRAQRQQGPKPPKAQPAP
AGKPKATAAGAGSQKPGARSSPSAAAAGREGSGSKERGDRFRAMLVAFLESSEAQLDFPA
SLNSHERMLVHVLAEEYGLLHLSSGEGRDRYISVCKRPQGAPELGAALXAPSRAPAALRA
PSREPPLPSEPQHPSGNTPDPAEPGESSQGSGKVDLKSLHLERVQREKARREEAARKVQE
PSRGSRKKDKSEAKGKPAIESVAGEDFDALISAAIKADRTCGFPRCKASVTTLGQLCHHC
QRLFCLSHHIPEVHGCGEKAKAQARQRISREGLLYPGSGSKDNSLDPAKRAHLQRRLDKK
LSELTSQRKGKKKDKEK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaggcggcggagcggcacctggggctgctgagggacgagcgggaggccgag
ctggcacagagcagggcatggcaggagagcgtctccctgaaggagctgcagcggagaggc
gtctgcttgctcaagctccaggtcagcagccagagaaccggcctctacgggcgtctcctc
gtgactttccagcccaggaagtgggattcagacaccgagctgccctccaacagcttcggg
cctggggacatcgtggggctctatgagtcggctgggcagggggacccgctgtgcacgggc
gtggtgacacgtgtcacccccaaggcagtgacggtggccctggaggagccccgggatggg
gagctggccctggaccacgagcgctccttccgcctgctcaagctggccaacgacgtcacc
tacaacaggctcaaaagagctttaactgcactcaagcagtaccgtggtggcccagcctct
gacctgatcgacgtcctcttctttgcctctgctcccagggcgttccctgaaacaaagcct
ctggagttcctcaatgcctccctggatgagtctcagagggaagctgtgtccttctccctg
gctcagagggagctggccatcatccacggacctcctggcacagggaaaaccacgaccctg
gtggagatcatcctgcaggctgtgcagcagggcctgaaggtgctgtgctgtgccccgtcc
aacgtggcggtggataacctggtggagcggctggccggctgcagggcgcggctgctgcgg
ctgggacaccccgcccgcctgctcccgcccacccagcggcactgcctggacgccgcgctg
gcccgcggggacagcgcccgcatcgtggctgacatcaggagggacatcgaccgcgcctgg
gcaaaaaccaaaaaggcccaagacaagggagagcgaagccattttctgggtgagattaag
atcctgaggaaggagctgaaggagcgagaagaggctgccatggctgcagccctgagccag
gccaacgttgtccttgccaccaacacaggtgcttcctcggatggccccctgaagctgctg
cctgaaacccactttgacctggtggtgattgatgagtgtgcccaggctctggaagccagc
tgctggatccctctgctcagggctcccaagtgcatcctggctggggatcacaagcagctg
ccccccaccatcatctcccacagggcggcggcggcggggctgtcgctgagcctgatggag
cggctggcggagcgctgcggggagcgggcggtgcgcatgctgacgctgcagtaccgcatg
caccgccacatcatggcctgggcgtcctcggagctctacggcggccggctccgcgcgcac
ccctccgtggcacagcacctgctcagggacctgccgggcgtcgcctccacagaagagacc
agcacccccttgttgctcatagacactgctggctgtggcctgttcgagctggaagtggag
gatgaacagtccaagggcaatccaggagaggtccagctggtggggatgcacgtccaggcc
ttggtggatgctggtgtgaaggccaaggacattgctgtggtggccccctacaacctccag
gtggacatgctccgacagcacctttgccacagccaccccgagctagaaattaaatcagtg
gatggtttccaaggaagggagaaggaagcagtgatcctgtcctttgtcagatccaacagg
aaaggtaagccctcgctgctggagcattgctctctggggaatggggaggaagcatttgca
cccgttacttcttgtcctgtcggccccttcctgcggcgcctcctggaccacctgggccag
cacggcctcgtgcgctccgccttcgagtacctggatgacctggtgccccaaaactacccc
ggggagggcagggcccagcgccagcagggccccaaacctcccaaagcacagccggctccg
gcggggaagcccaaggcgacggcagctggagcagggagccagaaaccgggagcacggagc
tccccgagtgctgccgcagctgggagagagggctcaggctcaaaggagcgtggggacagg
ttcagggccatgctggtggccttcctggagagcagcgaggcgcagctggatttcccggcg
tccctgaattcccacgagcggatgctggttcacgtgctggcggaggagtacgggctgctg
cacctgagctccggggagggccgggacaggtacatcagtgtctgcaagagaccccaagga
gcccccgagcttggagctgccctctgagccccttcccgagcccccgctgccctccgagcc
ccttcccgagagcccccgctgccctccgagccccagcatcccagcgggaacacccctgac
cctgcagagccaggggaaagcagccagggctcggggaaagtggacctgaaatccctgcac
ctggagagagtccagagggagaaagccaggcgggaggaggcggcaaggaaggtgcaggag
cccagccgtggcagcaggaaaaaggacaagagcgaagccaaaggaaaacctgcgatcgag
agcgtggctggagaggattttgatgctctgatctctgctgccatcaaagctgacaggacc
tgtggcttcccccgctgcaaggcctctgtcaccaccctgggccagctctgccaccactgc
cagcggctcttctgcctcagccaccacatccctgaggtgcatggctgtggggagaaggcc
aaggcccaggcacggcagcggatcagccgggaagggctcctgtaccccgggagcggctcc
aaggacaactccctggaccccgccaagcgcgcccacctccagcggcgcctggacaagaaa
ctcagcgagctgaccagccagaggaagggcaaaaagaaagacaaggagaaatga
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