Ficedula albicollis (collared flycatcher): 101807800
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Entry
101807800 CDS
T02815
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04145
Phagosome
fab04510
Focal adhesion
fab04512
ECM-receptor interaction
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101807800 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101807800 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
101807800 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101807800 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101807800 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fab04147
]
101807800 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
101807800 (COMP)
Membrane trafficking [BR:
fab04131
]
Endocytosis
Phagocytosis
Opsonins
101807800 (COMP)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101807800 (COMP)
Exosomal proteins of colorectal cancer cells
101807800 (COMP)
Exosomal proteins of bladder cancer cells
101807800 (COMP)
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101807800 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
101807800
NCBI-ProteinID:
XP_016160039
LinkDB
All DBs
Position
28:4391393..4412743
Genome browser
AA seq
788 aa
AA seq
DB search
MAPALLLLLLCCPLCWSQQRRIDPSRPLQSAAPRKEPAWSRNPGNSLAAGGEVGPEMLQE
MRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVITMTQFNRCVPNPCF
PGVPCTESGGGFRCGACPAGYSGNGTHCSDINECNANPCFPKVQCINTNPGFRCDPCPPG
FTGQLLEGVGLAFARANKQVCTDINECETGAARNCVPNSICINTRGSYKCGPCKPGFVGD
QSSGCRSQAAPGARRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDID
GVPDEKQRCSDKKCRKDNCVTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRN
ADQRNADRDNFGDACDNCRQVKNNDQKDIDGDGRGDECDDDMDGDGIKNSVDNCRRVPNP
DQRDGDGDGVGDACDSCPSLSNPDQVQTPPWVLVQACPVPVPSDGDGHQDSRDNCPSVPN
SSQVDTDGDGLGDECDEDDDDDGIPDFRPPGPDNCRLVPNPGQEDSDGDGVGNLCEDDFD
RDMVIDRIDVCPENAQVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPG
LAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRA
VAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHR
PQVGYIRARFYEGPEVVADTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDY
ETFRVQQD
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccccggcgctgctcctgctgctgctgtgctgtcccctgtgctggagccagcagaga
cgcatcgatcccagccggcccctccaaagcgctgccccccgcaaagagcccgcctggagc
aggaatcccgggaattccttggcagcaggaggagaagtcgggcctgaaatgctgcaggaa
atgagggaaaccaaccgggtgctgctggaagttcgggatttgttgaagcagcagatcaag
gagatcacgttcctgaagaacacggtgatggagtgcgatgcctgcgggatgcggccggag
gtgacgggtcccgtcatcaccatgacccagttcaaccgctgcgtgcccaacccctgcttc
ccgggcgtgccctgcaccgagagcggcggcggcttccgctgcggggcgtgtcctgcgggc
tacagcgggaacgggacccactgcagcgacatcaacgagtgcaatgccaacccctgcttc
ccaaaagtgcagtgcatcaacaccaaccccggcttccgctgcgacccctgcccgcccggc
ttcacggggcagctgctggagggggtggggctggcctttgccagggccaacaaacaggtg
tgcaccgacatcaacgagtgtgagactggagctgccaggaattgtgtcccaaactccatc
tgcatcaacacccggggatcctacaagtgcgggccctgcaagccgggctttgtgggggat
cagagcagcggctgccgcagccaggcggcgccgggggcgcggcgctgccccaacggcgag
atcagcccgtgccacgagaaggcggagtgcatcgtggagagggacggctccctgtcctgc
cagtgcctcgtgggctgggctgggaacggctacgtgtgcgggaaggacacggacatcgac
ggggtccccgacgagaagcagcgctgctccgacaagaaatgccgcaaggataactgcgtg
actgtccccaactccggccaggaggacgccgacagggacgggattggggacgcctgcgac
gatgatgccgacggggacgggatcccaaacgctgaggacaactgtgtgtacaccaggaac
gcggaccagcgcaacgccgacagggacaacttcggggacgcgtgtgacaactgccggcag
gtgaagaacaacgaccagaaggacatcgatggcgacggccggggcgacgagtgcgacgat
gacatggacggggacgggatcaaaaactccgtggacaactgcaggagagttcccaaccct
gaccagagggacggggacggggacggcgtgggggacgcctgtgacagctgccccagcctc
agcaaccctgaccaggtacagacccccccgtgggtcctggtccaggcctgtcccgtccct
gtccccagtgacggtgacggccaccaggactctcgggacaattgtccctcagtgcccaac
agctcccaggtggacacggacggggacgggctgggggacgagtgtgacgaggacgacgac
gacgacgggatccccgacttccgcccgcccgggcccgacaactgccgcctggtgcccaac
cccggccaggaggactcggatggggacggcgtggggaacctgtgtgaggatgacttcgac
agggacatggtgatcgacaggatcgacgtgtgccccgagaacgcccaggtgaccctgacc
gacttcagggccttccagaccgtggtgctggaccccgagggggacgcccagatcgacccc
aactggatcgtgctcaaccagggcatggagattgtccagaccatgaacagcgaccctggc
ctggctgtagggtacacagccttcaatggtgtggatttcgagggcaccttccacgtcaac
acggccacggacgacgactacgccggtttcatcttcggctaccaggacagctccagcttc
tacgtggtgatgtggaagcagatggagcaaacctactggcaggccaaccccttccgggcc
gtggcagagccaggcatccagctgaaggcagtgaaatccaaaacggggcctggggagtac
ctgaggaactcgctgtggcacacgggggacaccacggaccaggtgaagctgctctggaag
gaccccaggaactcgggctggaaggacaaaacctcctaccgctggttcctgcagcaccgg
ccgcaggtcggctacatccgggctcgtttctacgaaggccctgaggtggtggcagacacg
ggagttgtcctggacaccaccatgaggggggggcgcctcggcgttttctgcttctcccag
gagaacatcatctggtccaacctgcgctaccgctgcaacgacaccatccccgaggactac
gagacgttccgggtgcagcaggactga
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