Ficedula albicollis (collared flycatcher): 101807817
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Entry
101807817 CDS
T02815
Symbol
RAD54B
Name
(RefSeq) RAD54 homolog B (S. cerevisiae)
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101807817 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fab03400
]
101807817 (RAD54B)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101807817 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
101807817
NCBI-ProteinID:
XP_005042359
UniProt:
U3JSE5
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All DBs
Position
2:complement(133337362..133401681)
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AA seq
919 aa
AA seq
DB search
MRRSAAPSQILGNAGKKPRFIPPGKCLSVCLKNETKEMDQEIKLKEVDEKEGGASLLSKI
NVQNQNENITHSVESTGKVKTKACFSIDKRIKAEMKTLNVPKADALYLPTSGTAKEEAAQ
EAPDCLVKYFSVVWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKAKELD
SLDEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGPHDTDATALSQTNTKPFCKPLKN
VCQASTKENMLKDSQSCKPRHDPNTSNSLVMPRPNASHQWMFNKAGLPVVDVVVDPYIAN
NLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPL
LKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFIGSPLYSVMIISYEMLL
RSLDQIQSVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDLQEFYALI
EFVNPGILGSLSTYRKIYEEPIVRSREPSAAEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTALQLELYRKLLSSRVITSCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKEKSCDPVSEEYDESSLYEGVIDVFPQDYTSDTFSETDSGKLQVLVKLLAAI
HELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGQTPVSQRQHIVDTFNGKFSPAF
IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHAVHIYRLLTTGSI
EEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSSCVTHDLLECDCMGK
IDHQNTSSEKPPISRSCQIEQNHGKPNSKKPLSMSQLMQWKHFSVQHQTLADPFLERIKE
NVSFIFQNVTTPTSPPNKT
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatctgcagctccaagtcaaatcctaggaaatgcaggcaaaaagccaaggttt
ataccaccaggaaaatgtctttctgtttgtctcaagaatgaaactaaggagatggaccaa
gaaattaagttaaaggaggtagatgagaaagagggaggtgcttcactgctgtctaaaata
aatgtccagaatcaaaatgaaaatattacacattctgtggagtcaactggaaaagtaaag
acaaaagcatgtttcagcattgacaagcgtatcaaggcagaaatgaaaacgctaaatgtg
cctaaagctgatgcactgtatttgccaacatcagggactgcaaaggaagaagcagctcag
gaagcacctgactgccttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattcttattacaaaaggaaagtcagtaatattg
aaagatatggaaggcaaagacattggcagaggtactggatataaagctaaagagctagac
agtcttgatgaaggtcaaacactgatggttggtggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcagcagtggcaggtgttttcaggctggaatagggcctcatgac
acagatgcaactgcattatctcaaactaatacaaaaccattctgtaaaccattaaaaaat
gtctgtcaagccagtactaaagagaatatgctcaaagattctcaaagctgcaaacctcgc
catgatccaaacacttcaaattctctagttatgccacgaccaaatgcaagtcatcagtgg
atgttcaataaggctggtttgcctgtggtggatgtagttgtagatccctacattgcaaat
aatctccgcccacatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatg
agagttagtggcagatttggagctattcttgctgatgagatgggcttaggaaaaaccctg
caatgcattgcacttgtctggactcttctgcgtcaagggccctatggatgcaaacctcta
ctaaagagagcactggtagtcacccccgggagtctggtgaaaaactggaaaaaagaattt
cagaaatggttgggaagtgaaaggatcaaagtctttacagttgatcaggaccacaaagta
gaagaattcattggttctccactttattcagttatgataatcagttacgagatgctgttg
cgatctttggatcaaattcagtctgtagaatttaatctcctaatctgtgatgaaggacat
cgtctgaaaaatagcactattaagacaactacagcccttactagtctgtcttgtgagaga
agaattatccttactggtacgcccatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatactcggttctttatccacgtatagaaagatatatgaggaa
ccaattgtcagatctagagaaccttcagcagcagaggaggaaaaggaattaggagaaaaa
agagcagcagagctcacacgcctcactggcctctttattctaagaagaacacaggaggtt
ataaacaaatttctgccccccaaaaaggagagcatcatcttctgccgaccaacagcactg
caacttgaattgtatcgaaagctgcttagttctcgtgttattacatcctgtctacaaggc
aggctggaaaatagtccacacctaatatgtataggagctttgaaaaaactttgcaatcat
ccatgtcttctgtttaaagctataaaggaaaaaagctgtgatcctgtgtctgaggaatat
gatgagtccagcctctatgaaggtgtaatagatgtcttcccacaagattatacttcagac
actttttctgaaaccgattcaggaaaattgcaggtgctggtgaagttgttagcagcaatc
catgagcttaactcttctgaaagagtcgtgttggtgtccaattacactcagacattaaac
gtgttacaagatgtatgcaaacattatggatactcctataccagacttgatggacagact
cctgtctcccagagacaacatattgttgatactttcaatggtaaattcagcccagctttt
atctttttgctgagttcaaaggctggtggagtgggactgaacctggttggagcatctcat
ttgatcctgtatgatattgactggaatccagctacagatattcaggcaatggctagagtg
tggagagatggtcagaaacatgctgtccatatctacaggctgctaaccacaggctcaata
gaagaaaagatttatcaaagacagatcagcaaacaagacctttctggggcagttgtagac
ctttccaaaacatctgaacacacacatttttctattgaggagcttaaaaatctctttact
ctacatgaagattccagctgtgttactcatgacttgctagagtgtgactgtatgggaaag
attgaccatcaaaatacttcctcagaaaagcctcccatatctagaagctgccagattgaa
caaaaccatgggaagcctaattcaaagaagccactttccatgtcacagttgatgcaatgg
aagcatttctctgtgcaacatcagactcttgctgatcctttccttgaaaggataaaagag
aatgtttctttcattttccagaatgtaaccactcctacttccccacctaataaaacctga
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