Ficedula albicollis (collared flycatcher): 101807884
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Entry
101807884 CDS
T02815
Symbol
ZC3H12B
Name
(RefSeq) zinc finger CCCH-type containing 12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101807884 (ZC3H12B)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101807884 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
101807884
NCBI-ProteinID:
XP_005045829
UniProt:
A0A803VGB8
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All DBs
Position
4A:complement(6901554..6911889)
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AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYLRSSTQWREKEV
STKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASSTTGTLVPRGPCPKEIASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGE
ISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGD
HGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLH
AQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
REPHIIPEHQYQTYKNLCNIFPPSVVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctaaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagacgcaggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgagcctgagcaaccatacttgagaagcagtactcagtggagagagaaggaggtt
tccaccaaaccgcatcggccgctctgccgctccccgtgtctggatcgcccaagtttttca
cagagcagtatcacacaagacttgaagctagatgaatgcaaaacaaatttggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcagatccaggct
gtactgaacaagttgggagcagatgcgctcatcaatgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacaaagcactgccagcagtaccactggtactctg
gtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactggaagatgaa
gtggtggataacagtgataacttgaggccaattgtcattgatggaagcaatgtcgctatg
agccatgggaacaaagaaggattttcctgccggggaattcaactagctgttgattggttt
ctggaaaaaggacataaagatatcactgtgttcgtacctgcatggagaaaagaacagtct
cgacctgatgcaccaattacagatcaagaaatcttacggaaattggagaaagaaaaaatt
cttgttttcaccccgtctcgaagagttcagggaagaagagtagtttgctacgatgatcga
ttcattgtcaaactcgctttcgactcggatggcatcattgtgtcaaatgataactatcgt
gatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctgctaatgtat
tcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgccatggtccaagc
cttgaaaatttcttaagaaaaaggcctgttattcctgaacataagaaacaaccgtgtcct
tatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgaacttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccagctccaaaggagaa
atcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctcagtc
ccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacagttcgtacat
cagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatacgagtcgctgggggac
catggctattactccttactcagtgatttctccaacttaagcataagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aatcgtcttcagcctttccctcatggttaccatgaagccttaaatagaggtcagagttac
ggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccacttaggcctacat
gcccagcatccagttgttggagcacggtccagttgtccaggagaataccctgtgcctcaa
aatgttcatccatcaactgcacaaccaagccgtgccttggtgatgacgagaatggacagc
atttctgactcacggctttatgaaagtaaccctacgaggcagagacgaccacctctctgt
cgagagcagcacgccagctgggatccattaccctgtgcatcagactcgtacacttaccac
tcctacccactgagtaacaacctcatgcagccttgttatgagcctgtcatggtgagaagc
atgcctgagaagatggagcaactctggagaaacccctggattgggatatgtggtgagcca
cgggagcctcatatcatcccagaacatcagtatcaaacatacaagaacctctgcaatatt
ttccctccaagcgttgtcctttctgtgatggaaaagaatccccacatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacagggcgttag
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