Ficedula albicollis (collared flycatcher): 101808072
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Entry
101808072 CDS
T02815
Symbol
SNX13
Name
(RefSeq) sorting nexin 13
KO
K17925
sorting nexin-13
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fab04990
]
101808072 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
fab04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101808072 (SNX13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
101808072
NCBI-ProteinID:
XP_016161714
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All DBs
Position
2:complement(31208597..31252547)
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AA seq
995 aa
AA seq
DB search
MGEEYRNYKYYSGDLKLYEYNINYSFSICSCLQTSFSIWGWGSLVLFLATFGPFAIFYFA
FYILCFVGGGFVVTLLFGKSNSEKYLEQCEHSFLPCTSVGIPKCIEEMKRETRPIKIDRR
LTGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQALQYALVQFSARSKETDW
QPYFTTRLVDDFGTHLRVFRKAQQRIAEKGNQMKDQAEELVDTFFEVEVEMEKEVCRDLV
CTSPKDEEGFLRDLCEVLLYILLPPGDFQNKIMRYFVREILSRGILLPLINQLSDPDYIN
QYVIWMIRDSNCNYEAFMNIIKLSDNIGELEAVKDKASEELQYLRSLDTAGDDINTIKNQ
INSLLYVIKVCDSRIQRLQSGKEIDTVKLAANFGKLCTVPLDHILVDNVALQFFMDYMQQ
TGGQAHLFFWMTVEGYRVTAQQQLEVLQSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEK
ASPRVNIDDNLVAKLAETLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFKQNVLYVRML
AELDMLKDPSFRGSDDGEGESFNGSPTGSINLSLDDLSNVPSDETVQLHAYISDTVYADS
DPYAVAGVCNDHGKTYALYAITVHRRNANSEEMWKTYRRYSDFHDFHMRITEQFENLANI
LKLPGKKTFNNMDREFLEKRKKDLNAYLQLLLNPEMMKASPALAHYVYDFLENKAYSKGK
GDFARKMDTFVNPLRNSMRNVSNAVKSIPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFK
VPPLMQKTYSDPDHCRVAAPIDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQ
QLIRATYGDTINRKIVDHVDWMTSPEQVADAVKRFRDAFWPNGILAEAVPRRDKAIRMRT
RVAGKTKLLEVMPDELKHIIGAETTRKGILRVFEMFQHSQLNKRMVYVFLERFLETLFPQ
NKFPELFNKLHSRSKQMQRYKQRLHSTQAPSLQKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagagtatagaaactacaagtattactctggagacttaaagttgtatgaatat
aatattaattattccttttcaatatgttcttgtttacagaccagtttttccatatgggga
tggggaagtcttgtgctttttctagcaacttttggacccttcgctatattttactttgca
ttttatatcctctgctttgtgggtgggggttttgtggttactcttttatttggaaaaagc
aattcagaaaaatatcttgagcagtgtgaacattcatttctcccttgtacatcggttggg
atccctaagtgcatagaagaaatgaaacgtgaaaccagacctattaagattgatagaaga
ctgacaggtgcaaacataattgatgagcctttgcaacaggtaatccagttttccctgaga
gactatgtgcagtattggtattatacactaagtgatgatgaatcctttcttctggaaatt
aggcaggctcttcagtatgcacttgttcagttttctgccaggtcaaaggaaacagactgg
cagccttatttcactacacgacttgttgatgactttggcactcatcttcgagttttcaga
aaagctcagcaaaggatagcagagaaaggcaatcagatgaaagatcaagctgaggaactt
gtagatacattctttgaggttgaagttgaaatggaaaaagaagtctgtcgtgatctagtc
tgcacttctcccaaagatgaagaaggattcctaagggatctgtgtgaggttttactgtat
atattgctacctcctggagacttccagaacaagatcatgcgatactttgtcagggaaatc
ctctccagaggaattcttcttccattaataaaccagctcagtgatcctgattatattaat
cagtatgtcatatggatgattcgtgattccaactgtaactatgaggcctttatgaatatt
attaaattaagtgataatataggagagttggaagcagtgaaagataaagcaagtgaagaa
ttgcaatatcttcgatctctagatacagcaggagatgatatcaacactataaaaaatcaa
ataaacagtttattatatgttattaaagtatgtgattcaagaattcagaggttgcagtca
ggaaaagaaatagatactgtgaaactggcagcaaactttggaaaactttgcacagtccct
ctggaccatattctggtagacaatgttgcactacagttttttatggattacatgcagcaa
actggtggccaagcacatctgtttttctggatgacagtggaaggatacagggttacagca
cagcaacagctggaggtacttcaaagccggcagaaagatggaaaacatcagactaatcag
accaagggtctattacgagcagctgcgtttggagtttatgagcaatatttatcagaaaag
gcatctccaagagttaatattgatgacaacttagtagcaaaacttgcagaaacactgaac
catgaggatccaacacctgaaatctttgatgacattcagagaaaggtgtatgagttgatg
ctgcgagatgagaggttctacccttcattcaagcagaatgtgttgtatgtgcgtatgtta
gctgagctggacatgctgaaggatcccagtttcagaggatcagatgatggtgaaggagaa
tcttttaatgggtctcctactggcagcataaatctgtccttagatgacctttcaaatgtc
ccttctgatgagacagttcagctccatgcatacatctcagatactgtctatgctgactct
gacccatatgctgtggcaggagtgtgtaatgaccacggcaagacgtatgccctgtacgcc
atcaccgtccaccggcggaacgcaaacagcgaggagatgtggaagacgtatcggcgctac
agtgacttccatgacttccacatgaggatcactgagcagtttgaaaaccttgcaaatata
ctaaaacttcctggcaaaaaaacatttaacaatatggacagagagtttttggaaaagagg
aaaaaagatttaaatgcttatttgcagctcttgttaaatcctgaaatgatgaaagcttct
ccagctttagcccattatgtgtatgatttcctggagaataaagcctacagcaaagggaag
ggagattttgcacggaagatggacacatttgtaaatccactgcgtaactctatgagaaac
gtatcaaatgcagtcaagtctatccctgacagcctggcagagggaatgactaaaatgtca
gacaacatgggtaaaatgtcagagagactgggacaagacataaagcagtcatttttcaag
gtgccacctctgatgcagaaaacctattcagatcctgaccattgccgtgttgcagcacca
attgatgacaacgtggatgacaatattccgctgagagtaatgctcctacttatggatgaa
gtctttgatttaaaggagagaaatcagtggttaagaagaaacataaaaaatctgcttcag
caacttattagagcaacatatggtgacacaattaatagaaaaatagttgatcatgttgat
tggatgacatctcctgagcaagtagcagatgcagtgaaacgcttcagagacgctttttgg
cccaatggcattttagcagaagcagttccacgaagggacaaagctattagaatgagaaca
agagtggcagggaaaaccaaattgctggaggtaatgccagatgaactgaagcacatcata
ggcgctgagactacgcggaaaggcattcttcgggtcttcgaaatgttccagcatagtcag
ctgaataagagaatggtgtatgtgtttctggaaagattcctagaaaccttatttccacaa
aataagttccctgagctgttcaacaaactgcattcaaggtcaaagcaaatgcagagatat
aagcagagactacactctactcaagcgccttccttacagaaaaggtga
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