Ficedula albicollis (collared flycatcher): 101808125
Help
Entry
101808125 CDS
T02815
Symbol
DDX17
Name
(RefSeq) DEAD-box helicase 17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101808125 (DDX17)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101808125 (DDX17)
Spliceosome [BR:
fab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101808125 (DDX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101808125
NCBI-ProteinID:
XP_016159098
LinkDB
All DBs
Position
1A:51589439..>51608529
Genome browser
AA seq
651 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGESFANGANKTYGS
AYGSPNSTFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcga
ggaggtcctcttcctccaaagaaatttggtaatccaggggaacgtttacgtaagaaaaaa
tgggatttaaatgagctgcccaagtttgagaagaatttttatgtggaacatccggaagtg
gccaggcttacgccatatgaagtagaagaattgcgaaggaagaaggagataacaattcgg
ggaatggagggctgccccaagccggtgtttgccttccaccagtgtagctttccacagtac
gtgatggatgccttgatggaccagaacttcacagagcccactccgattcagtgccaaggc
tttccactggccctcagcggtcgtgacatggtgggcattgcacagaccggctctgggaag
acactagcatacttgttgcctgcgattgttcacatcaaccaccagccatatttggagaga
ggggatggcccaatttgtctggttctggcacctactagagagttggcccagcaagtgcag
caggtggctgatgattatggcaaatgttcaagactgaagagtacctgcatatatggagga
gcacccaaaggtccccagatcagagatttagaaagaggtgtggagatctgcattgctaca
ccaggtcgcttgattgacttccttgaggctggaaagaccaaccttcgtcggtgtacgtac
ctggtgctggatgaagctgacagaatgttggacatgggatttgaaccacaaattcgtaaa
attgttgaccagataaggcctgaccgccagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgctgaggacttcctgcaggactatgttcagatcaatgtgggaaac
ttggagctaagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgag
aaagaccacaaattgatacaactgatggaagaaatcatggcagagaaggaaaacaagact
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagccatgtgtatccatggagacaagagtcagccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgttaaatttgtgataaactacgactatccgaacagctccgaagat
tacgtgcaccgtatcggccgtaccgcgcgcagtaccaacaaaggtactgcctacaccttc
ttcacgccgggaaatctgaaacaagccagggagcttatcaaagtcttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggaggaggtggcggt
ggaggaggtcgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgaaagttttgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctacttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccacggctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttccacagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtacccaccccctcccccgcccccaccc
DBGET
integrated database retrieval system
