Ficedula albicollis (collared flycatcher): 101808336
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Entry
101808336 CDS
T02815
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101808336 (AFF1)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
101808336 (AFF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
DUF484
Motif
Other DBs
NCBI-GeneID:
101808336
NCBI-ProteinID:
XP_005044823
UniProt:
U3JSP0
LinkDB
All DBs
Position
4:complement(14434068..14514508)
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AA seq
1232 aa
AA seq
DB search
MAAQSSLCNEDRNLLRIREKERRSQEALEDKKQFSEKTPLFAEPYKTNKEDELSSRIQNM
LGNYEEVKEFMSNKSCQNLIGIPKSVAPVFPPGQPDRPYFPEKAIRTLPPSFQHLPRRPP
VGPMLVPPRAPSHSSHHPKAQPGAEAASGLQSRSRSLPSSRGHAQEHGRAARDAQAGFPH
GHNDKPGSGEGRAHGLQASPLALSPFLPCLLSSPVAPLSPLHSSQNINSRSQNSGKSHGS
AYSQPKSLQDLVTGSQEKESRDSPAVTLTSTTQPSSQTFPPSLTSKASAMQQKPTAYVRP
MDGQDQAPFESLELKPLLEEYHEGPNEDVSDLKAKVKAELSKLETPSEPKEETDEDLSDL
KAKAKAELSKFETPSEPIEQTNPIDVQSIEEILREMTRSWPPPLTALNTPTKAEPPKFPF
PTKELQPEGSVTKDQKQYGTPSEILPGSQPRTSMLQDDLQLSDSEESGDDQVVEKSPSSL
APPSSLQSRPKSVGSAHSSSSESGSTSDSDSSSDSETESHSSSDSEANDPPRAPAPEPEP
PTPNKWQLDNWLTKVNPPAVPTESLSDIARGDGCEEGKRQERGISSHSCQQHTELREPPH
KSQVARAPQEAPLPTKRSCQKPAARAGEPSPRHTVGIKGPSKPLLHQGPKRGLQVESEPG
PSEVADQSFRDKPKVKKAVKTKSSDRKDLKPGLQGPSEKKKDKGSHQANAKPFLNPRLMG
DSQARDALSPLPQGQGTTPIRTSSHRPQDLPKEKLPLPLREKLLSPVRDPPACEHLVVKI
DLCHLEKVPQPPRKNGHQRKAETKDLPGVRKQDLKRRATDTSEESLGKKKRGEKEETDRK
KMKSEKETKSLQSSSSKDSSKLKSSKASCETQKKDVLPPLPAVSAAQPAPKTAKMTQKRP
RNETDELPAMDNPARNKSNHKDPLFAKHRKLEGNHTELSKGIKGGAGDVTKPFSVPSLPN
GTSKPRRPLLKFEKQHSKEYYIEQAQRLKHKADAMTDKTGKAFEYLEAALLFIEYGIALE
SDVLEPKSAYSIFSDTIVLIKFIMTLKPFADSSVSSHGKIFAVLRMRCQSILHMAMFGYK
KDTAMRYSRLLNDHFKSNFRVIQAPSPDVARSTGLPSPLSPIPSPAGSVSSQPGSNDSNG
VGHSSIGSSTGSTVTVSCHISNVTSSYVNITSYILHAYEIWEKADALARKNKEFFAELSR
ATSALALTSSLTDLVHYIRQGLQWLRLEANMP
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagtcgagcttgtgcaatgaggacagaaacttgctgcggattcgagagaaa
gagagacggagtcaggaggctctggaagacaaaaagcagttctctgagaagactcccctc
tttgcagaaccctacaagactaataaagaagatgagttgtcaagccgaattcagaacatg
ctgggcaattatgaggaggtcaaggagttcatgagcaacaaatcttgtcaaaacctcata
gggattccaaagagtgttgcccccgtgtttccccccggacagcctgatcgcccgtacttc
cctgagaaggccatccggacactgccgccttcattccagcacctgccccgccgcccaccc
gtgggacccatgcttgtaccccctcgtgctcccagccactccagccaccacccaaaggca
cagccaggagcagaggcagcctcaggtttgcagagcaggagccgtagcttgcccagctct
cggggccacgctcaggagcacggccgggctgcccgggacgctcaggcaggttttccccac
ggccacaatgacaagcctggcagcggggaaggccgtgctcatggcctgcaggcctcccct
ctggcactctcccctttcctgccatgtttgttgtcttctcctgtggcacccctgtcacct
ctacattccagccagaatatcaattccaggtcacagaacagcggcaaaagtcatgggtca
gcctacagtcaacccaaatcattgcaggacttagtgacaggatcacaggagaaggaaagt
cgggacagcccagccgttaccttgaccagcaccactcagccttcctctcagacttttccc
ccttctttgacatcaaaagccagtgcaatgcagcagaaaccaactgcctatgtcagaccc
atggatggccaagatcaggcaccatttgaatccctggagctcaaacctctcctggaggaa
taccatgaaggacccaatgaagatgtctcagatttgaaggcaaaagttaaagctgaactg
tccaagttggaaaccccttctgagcccaaggaagaaactgatgaggatctttcagatttg
aaggcaaaagccaaagcagaactatccaaatttgaaacaccttctgagcccatagagcaa
accaaccccattgatgtgcagtccattgaagaaattttgagggaaatgacccgctcttgg
ccacctcccctgacagctcttaatacacctactaaagcagagcctcccaaatttcctttc
ccaacaaaggaattgcaacctgaaggatctgtaacaaaggatcagaagcagtatggaaca
ccttcagaaatattgccaggttctcagccaagaacatcaatgctccaggacgacctgcag
ctcagtgatagtgaagagagtggtgacgatcaagttgttgaaaagtcaccttcttcactt
gctcctccaagttccttacagtcccggcccaagagtgtgggatcagcacattccagcagc
tcggagtcagggagcaccagtgactcagacagctcctcagactcggagacagagagccac
tcctcgagtgacagtgaagcaaacgaccctccaagagcaccagcacctgagcccgagcca
ccaactcctaataagtggcagcttgacaactggctgaccaaggtgaaccccccggcagtg
ccaacagagagcctcagcgacattgcccgtggggatgggtgtgaggagggcaagaggcag
gagaggggcatcagcagccattcctgccagcagcacactgagctcagggagcctccccac
aagagccaagtggccagggctcctcaggaggctcctctcccgaccaaacgcagctgccag
aagcctgccgcgcgcgccggggagccctcgccccggcacactgtggggatcaaagggccc
agcaagcccctgctgcaccaggggcccaagagaggcctccaggtggagagcgagcctggt
ccttcagaggtcgctgaccagtctttcagggacaagccaaaagtcaaaaaagcagtgaag
acaaaatccagtgacagaaaggacctgaaaccaggacttcaagggccctctgagaaaaaa
aaggacaagggctcccaccaggccaatgccaaacccttcttgaaccccaggctcatggga
gatagccaggcacgtgatgctctcagtccccttcctcagggccagggcacaactcccatc
aggaccagcagccacaggcctcaggatttgcccaaggagaagctgcccttgcctctcagg
gagaagttgctctcaccagtgagggatcccccagcctgtgagcaccttgtggtgaaaata
gatctctgtcacctggaaaaagtccctcagccccccaggaaaaatgggcaccagaggaaa
gcagagaccaaggaccttcctggtgtgaggaagcaggacttgaagaggagagccacggat
acttctgaggagtcccttggaaaaaagaagaggggagagaaggaggagactgataggaag
aaaatgaaatcagaaaaagaaacaaaatcattgcagtcttcatccagcaaagactccagt
aaattgaaatcatcaaaagcttcatgtgaaacccagaagaaagatgtgctcccaccactg
ccagctgtgtctgctgcacaacctgcaccaaagacagccaagatgacccaaaagagaccc
agaaatgagactgatgagctgcctgccatggataaccctgccaggaacaagagcaaccac
aaggatcctttgtttgccaagcacaggaaactggagggaaatcatacagaactgtcaaag
ggcatcaaaggaggtgcaggtgatgtcacaaagcctttctcagtgccttctttgccaaat
ggtacctctaagccaaggagacctctgctcaagtttgaaaagcagcattcaaaagaatac
tacattgaacaggcccagaggctgaagcacaaagctgatgcaatgactgacaagactgga
aaggcctttgagtacctggaggctgctcttttattcattgaatacgggattgccttggaa
tcagatgtgctggaaccaaaatcagcttacagcatattcagtgacaccatagttctcatc
aaatttatcatgactttgaaaccatttgcagactcttcagtctcttcgcatggaaaaatc
tttgctgtgttacgcatgcgctgccagtccattctgcacatggcaatgtttggttacaaa
aaggacactgctatgaggtattccagactcctgaatgaccacttcaagagtaatttcaga
gtaatacaagcaccttctccggatgttgcaagaagcacaggcttgccttctcctctttct
ccaataccctctcctgctggatctgtgagttctcagccgggatcaaatgatagcaacggc
gttggccacagcagcattggcagcagcactggctcgactgtcactgtctcctgtcatatc
tccaatgtcacctcttcctatgtcaacatcacctcctatatcctccatgcatatgaaatc
tgggaaaaggctgatgcactggccagaaagaataaagagttttttgctgaactcagcaga
gcgacgagcgctctggcactgaccagtagcctgacagacctggtacactacatcagacag
ggattacagtggctgagactggaagcaaatatgccttaa
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integrated database retrieval system
