Ficedula albicollis (collared flycatcher): 101808339
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Entry
101808339 CDS
T02815
Symbol
ARHGEF6
Name
(RefSeq) Rac/Cdc42 guanine nucleotide exchange factor 6
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04518
Integrin signaling
fab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
101808339 (ARHGEF6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101808339 (ARHGEF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101808339 (ARHGEF6)
Membrane trafficking [BR:
fab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101808339 (ARHGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_1
SH3_9
PH
SOS1_NGEF_PH
RhoGEF67_u1
CAMSAP_CH
Nmad5
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
101808339
NCBI-ProteinID:
XP_005045741
LinkDB
All DBs
Position
4A:complement(51479..91606)
Genome browser
AA seq
773 aa
AA seq
DB search
MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKMSLKDGTVLCKLINRLLPGSAEKYCLEP
KNEADCISNIQEFLKGCALLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKGPCS
HLSSPNSVAGAPPSDASGAASPAAQLLRRQSQPVEMTENGSHQLVVKARFNFKQTNEDEL
SVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTK
NYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTL
NQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQ
GAASPGILILTTSLSKPFLRLEKYVTLLQELERHMEEAHADHEDVLKAITSFKSLVSQCQ
DLRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLL
MLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGSMMERLTVSCSTSQDLHEW
LDHLQRLTKGTCSTISKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPS
AALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVI
EAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKD
EVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaagaacagattgtgacatggcttatttcactaggagtcttaaattcccct
aagaaaatagtagatgatccagaggggttcctgaaaatgtctctgaaagatggaactgtg
ctttgcaaactcattaatcggcttcttccgggatctgcagaaaagtattgcctggagcct
aaaaatgaagctgattgcatcagtaatattcaagagttcttgaaaggctgcgcacttctg
aaagtggaggtgtttgatccacatgatttgtacactggggatcagttctccaaggtcctg
agcacattaacagctgtaaataaagctactgaagatcagctgtcaaaagggccatgttca
catctgtcctctcctaactccgtggctggagccccgccgagcgacgccagcggcgcagct
tccccggcagcacagctgctccggaggcagtcccagcccgtggagatgaccgagaatggc
agtcatcagctggtggtaaaggccaggttcaattttaagcagaccaatgaggatgaactc
tctgttaacaaaggcgacattatttatgtcacccgagttgaagaagggggctggtgggaa
ggtaccttgaatggaaaaacaggctggttcccaagcaactacgtcagagaaatcaaatct
accgataaaccactctctcccaaagcattaaaagggctagaaaacactcagctgacaaag
aattattaccctgtggtgttgcaaaatattctggaaacagaacgagattatgcaaaggag
ctacagtcacttcttggaacttacttaagacccctccagtcttatgataagctcagcgcc
ggggacatcgcagcactgctgggaaacatggaagaaatctctgcttttcagcaaacactg
aaccaagccttagaagaagttgcaaagctccctgagaaccagcagcgtgtgggaggctgt
ttcatgaacctgatgccccagttccgctccctgtacctgacgtactgtgctaaccaccct
tcagcagtcaatgtcctcacgcagcacagtgatgagctggagaagttcatggagagccag
ggtgcggccagcccaggcattctcatcctgaccacgagcctcagcaaacccttcctgagg
ctggagaaatacgtgacactgctgcaggagctggagcggcacatggaggaggcgcatgca
gatcatgaagatgttttgaaagccatcacatccttcaagtcccttgtgtcacaatgccag
gacctgaggaagaggaaacaacttgagctgcaaatcctttctgaatccatccagcgctgg
gaaggagaggacataaaaatgatgggaaatgtcatctacatgtcccaggttatggtgcag
tctgggggaagtgaggagaaagaggagcggtatttcttgttattttccaatgttttgcta
atgctgtctgcaagcccacggatgagtgggttcatctatcagggaaagctgcctttgaca
ggaatgacactgacaaagctggaagatgctgaagggaatgagcacatgtttgaaatcaca
gggagcatgatggagcggctcactgtgtcctgcagcaccagccaggacttgcatgaatgg
cttgaccacttgcaaaggctgaccaaggggacatgcagcaccatctccaaaacacagtcc
tggagccctcattcgacatttagttcagctgggcagatccgtgggcctctggaacccccc
aaaatcctcaaaccctggagcttgagctgcctccgtcctgctcctccactcagaccatca
gcagcactgagttacaaagagaggatgtcttatatcttaaaggattccagcaaaagtcca
aaaacaatgaagaagtttcttccaaaaaggaaaactgagagaaaaccatccgatgaagag
tttgttattcggaaaagtactgctgctctggaggaggatgctcagatcctgaaagtgatt
gaagcatactgtacgggggcaggcttccagcaagctctcagctcaggctctcgtaaagac
tccatcccccaagtccttcttcctgaggaagagaaaatcatcatagaggaaacacgaagc
aatggccagacagtcacagaggaaaaaagccttgttgacacagtttatgcactgaaagat
gaagtcaaagagctgaagcaggaaaacaaaaggatgaagcagtgtttggaggaagagctt
aaatccaggaaggacttggagaagctggtgagaaggctgctgaagcagacagatgagtgt
ggcagggaggacacagggcgcaaatcatccctgatcgcctga
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