Ficedula albicollis (collared flycatcher): 101808346
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Entry
101808346 CDS
T02815
Symbol
TAF5
Name
(RefSeq) TATA-box binding protein associated factor 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101808346 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101808346 (TAF5)
03036 Chromosome and associated proteins [BR:
fab03036
]
101808346 (TAF5)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101808346 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
101808346 (TAF5)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101808346 (TAF5)
STAGA complex
101808346 (TAF5)
TFTC complex
101808346 (TAF5)
SAGA complex
101808346 (TAF5)
SLIK complex
101808346 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_SCAP
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
101808346
NCBI-ProteinID:
XP_005048731
LinkDB
All DBs
Position
6:24268537..24280784
Genome browser
AA seq
767 aa
AA seq
DB search
MRITVSPQRPHSTFPSHRPGPAATKRFRSVAKRSRACLWGQRQQCPSFALTVGALDRQTL
VAVLQFLRRSNLRESEEILRREARLLGDDLGAAALSPASAGLLGGSGSDADSGEALLGRG
TGAAAVAVAGNVATVATSSPGVAAVAAVPPGKVGGAVVVEDQPDVSAVLSAYNQQGDPTL
YEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQEC
YYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIV
QEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEG
ENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRL
GPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADL
SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQ
TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT
RFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRV
LLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFT
TATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccgtgagcccgcagcgcccacacagcaccttcccctcacaccgccccggc
cccgctgccacaaagcgcttccgcagcgtcgcaaagcgaagccgcgcgtgcctgtggggg
cagcggcagcagtgcccttcctttgccctcactgtcggggcgttggaccggcagacgctt
gtggctgtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctacgt
cgcgaagcccgcctgctcggagatgacctgggtgccgccgccctcagccccgccagcgcc
gggctcctggggggctccggcagcgacgcggactccggcgaggcgttgctcggccggggc
accggcgctgccgccgtcgccgtagcaggcaacgtcgccactgtcgcgacttccagcccc
ggggtggctgcagttgccgccgtgccgccggggaaagtcggaggcgcggtggttgtggag
gatcagccggacgtgagcgcggtgctgtcggcctacaaccagcaaggggaccccacgctg
tacgaggagtactacagcggcttgaaacacttcatcgagtgctccctggactgtcatcgg
gcagaactgtctcagctcttttatcctctcttcgtgcacatgtacttggaattggtctac
aatcaacatgagagtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgc
tattaccaggatgacctgcgtgtattgtcgagtttaaccaaaaaagaacatatgaaaggt
aacgagaccatgctggatttccgaacaagcaagtttgtgctgcgcatttcccgtgactct
taccagctcctgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgtt
caggagcatctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagat
gctatggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttc
ttcggcttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaagga
gaaaatgaggaaggaaaaccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaa
agtaaaaaacaggaccctaatgctcctccccaaaacagaattcctctgccagaactgaaa
gactctgacaagctggataaagtaatgaatatgaaggaagctgcgaggcgagtgcgtctt
ggaccagagtgcttgccctccatctgtttctacacattccttaatgcttaccagggtctg
actgcagtggatattacagatgactccagcatgattgtaggaggctttgctgactctact
gtcagagtgtggtctgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctc
agtctcattgataaggaatctgatgatgtcttggagaggatcatggatgagaaaacagca
agtgagttgaagattttgtatggtcacagtggacctgtctatggcaccagcttcagtcct
gataggaactatctgttgtcctgttctgaggatggcaccgtgagattgtggagtctccaa
acattcacgtgtttggtgggatataaaggacacaattatccagtttgggatacacagttc
tctccttatggttattactttgtatctgggggacacgacagagtggctcgtctgtgggca
acagatcactaccagccattacggatctttgctggccatcttgcagatgtgacgtgtacc
cgatttcatccaaactccaactatattgctacaggctcagcagacagaactataaggctc
tgggatgttttgaatgggaattgtgtaagaatattcactggacataagggaccaattcat
tcattggcattttctcctaatggacgattcctggctactggagcaacagatggaagagtt
ctgctgtgggatattggacacggcttgatggttggcgaattgaaagggcacactgacact
gtctatgcgctcagattcagtagggatggggagattttagcatcaggttcaatggataac
acagttcgtctgtgggacgctgtgaaggcatttgaagatttagaaactgatgactttact
acagccactggacacataaacttgcctgaaaactcacaggacttgctactgggcacatac
atgaccaaatcaacccctgttgttcatctccatttcacacgcaggaacctgctgctggct
gcaggtgcctacagctcacagtag
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integrated database retrieval system
