Ficedula albicollis (collared flycatcher): 101808366
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Entry
101808366 CDS
T02815
Symbol
TRAF7
Name
(RefSeq) TNF receptor associated factor 7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101808366 (TRAF7)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101808366 (TRAF7)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
101808366 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
NBCH_WD40
Beta-prop_IP5PC_F
WD40_like
Beta-prop_SPT8
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4
zf-TRAF
zf-C3HC4_2
Beta-prop_EIPR1
zf-C3HC4_4
Beta-prop_IFT140_2nd
Sina_ZnF
Beta-prop_Nup120_160
zf-C3HC4_3
WD40_MABP1-WDR62_1st
zf-RING_5
PKcGMP_CC
Filament
DUF641
MIOS_WD40
DUF1664
EzrA
Leu_zip
DUF16
DUF4164
Bacillus_HBL
KxDL
Motif
Other DBs
NCBI-GeneID:
101808366
NCBI-ProteinID:
XP_005054067
UniProt:
U3JLS6
LinkDB
All DBs
Position
14:complement(8450909..8481881)
Genome browser
AA seq
670 aa
AA seq
DB search
MSSSKNARYNRFSSGTTNITASENTNGTRMETTFGPAFSAVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPTAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDMLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaagcaagaacgctcgctacaatcgtttctccagtggcacaacaaacatcact
gcttctgaaaacaccaacgggacaagaatggaaacgacgtttggaccagccttctctgct
gtgaccaccatcacaaaggctgacgggaccaatactttcaagcagcaccgtcggaccccg
tcctcctccagcaccctcacctactccccacgggatgaggatgatggcatgcctcccatc
agcaccccgcgccgctccgactccgctatctccgtccgctccttgcactccgagtccaac
atgtccctgcgctccacgttctcactccatgaggaagaggaggagccagagcccctggtg
tttgcagagcagccgtccgtgaagctgtgctgccagctgtgctgcagtgtgtttaaggat
cccgtcatcacaacctgtgggcacacgttttgcaggagatgtgccttaacatctgagaag
tgccccgtggacaacgccaagctgacggtggtggtgaacaacatcgcggtggccgagcag
atcggggagctgttcatccactgcaagtacggctgccggcccgccgccagcagcaagccc
accgccttcgaggtggacccccggggctgccccttcaccatcaagctgagtgccaggaag
gatcatgagagcagctgtgattacaggcctgtgcgctgtcccaacaaccccagctgccct
cccctcctcaaaatgaacctggaggctcacctgaaggagtgtgagcacatcaagtgtccc
cactccaaatacgggtgcacattcataggaaaccaggacacctacgagacccacctggag
acgtgcaagttcgagggtctgaaggagttcctgcagcagacggacgatcgcttccacgag
atgcaggtggccatggcccagaaggaccaggagatcgccttcctgcgctccatgctgggc
aaactctccgagaaaatcgaccagctggagaagaacctggagctgaagtttgatatgctg
gatgagaaccagagcaagctgagcgaggacctgatggagttccgcagggacgcctccatg
ctgaacgatgagctgtcccacatcaatgctcggctcaacatgggcatccttggatcctat
gatcctcagcagatcttcaagtgcaaggggacctttgtgggccaccagggccccgtgtgg
tgtttgtgtgtgtactccataggagacctgctcttcagtggctcctcagacaaaaccatt
aaggtgtgggatacctgtaccacatacaagtgccaaaagaccctggagggtcatgacgga
attgtgctggctctctgcatccaggggaacaagctgtacagtggctctgctgactgcacc
atcattgtctgggatattcaaaacctgcagaaggtgaacacgatccgagcacacgacaat
cctgtttgcactttggtctcctcacacaacatgctcttcagtggctccctcaaagccatc
aaggtgtgggatattgtgggtactgagctcaagctgaagaaggagctgacaggtctcaac
cactgggttcgagcgctggtggcttcccagaactatctctacagtggatcttaccagacc
atcaagatctgggacatcaggaacctggagtgtgtgcacgtgctgcagacgtcgggaggc
agcgtgtactccatcgccgtcaccaaccaccacatcgtgtgcggcacctacgagaacctc
atccacgtctgggacatcgagaccaaggagcaggtccgcacactgaccgggcacgtgggg
acagtctatgccctcgccgtcatctccacgcccgatcaaaccaaagtgttcagcgcgtcc
tacgaccgctcgctcagggtgtggagcatggacaacatgatctgcacccagaccctgctg
cgccaccagggcagcgtcaccgccctcgccgtgtcccgcggccgcctcttctccggcgct
gtggacagcactgtaaaggtctggacgtgctaa
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integrated database retrieval system
