Ficedula albicollis (collared flycatcher): 101808418
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Entry
101808418 CDS
T02815
Symbol
KCNMA1
Name
(RefSeq) potassium calcium-activated channel subfamily M alpha 1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
101808418 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101808418 (KCNMA1)
Ion channels [BR:
fab04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
101808418 (KCNMA1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
101808418
NCBI-ProteinID:
XP_005048236
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Position
6:12974871..13438384
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AA seq
1208 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCKACHD
DITDPKRIKKCGCKRLEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQID
NMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNL
VMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLC
DMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRTSPD
NSPVHGLLRQPSITTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAV
SVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRV
AQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNP
PYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRPNRTK
TRDSRDKQNATRMNRMGQEKKWFTDEPDNAYPRNIQIKPMSTHMANQINQYKSTSSLIPP
IREVEDEC
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatacacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctacttcggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagatttcttcacggtccctccagtgtttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacaattc
tcagaaatcttacaatttctgaatatacttaaaacaagtaattccatcaagctagtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccatgggaaaatttccaaaataatcaaccgctaacatattgggaatgt
gtttatttgctgatggttacaatgtccaccgttggctatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagtgtgtcg
aatttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcactcag
gtggaattttatcagggctcagtccttaatccccatgacctggcgagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttccataaagaattatcatccgaagataagaattatc
actcagatgttgcagtaccacaataaggctcatctactaaacatcccaagctggaactgg
aaggaaggggacgatgcgatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccaggcctttcaacaatgttagccaacctcttctctatgaggtcattcata
aagattgaggaggatacgtggcagaaatactacctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgaactggtg
tttgcgaagctgaagctcttaatgatagccatagaatacaagtcggaaaagcgcgaaagc
agtatattaatcaatcctggaaaccacgtcaagattcaagaaggtaccttaggattcttc
attgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaaggcctgtcatgat
gacatcacagatcccaaaaggataaaaaaatgtggctgcaaacggctcgaagatgagcag
ccgtcgacactatcacccaaaaaaaagcagcgaaatggaggcatgcgaaattcacccaac
tcctcacccaaactgatgaggcatgaccccttgttaattcctggcaacgagcagattgac
aatatggatgccaacgtgaaaaaatacgactctacagggatgtttcattggtgtccagcc
aaagacatcgaaaaggtcattttgactcgaagtgaagcagcgatgacagttttaagtggg
catgtagtcgtttgcatatttggggatgttaaatctgctttgattggattaagaaattta
gtgatgccattacgagccagcaactttcactaccatgaactcaagcacatcgtgtttgtg
ggttcacttgaatacctgagaagggaatgggagacactgcataacttccccaaggtttca
atcttgcctggtacgccattaagtcgggctgatttaagggctgtcaacatcaacctctgc
gacatgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcaggac
aaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcattggg
gtcttgcaggctaattcccaaggctttacaccccctgggatggataggacatctccagac
aacagtccagtccatggccttttacgccaaccctccattacaacaggagccaacatccct
attataacagagctagtaaatgattcaaatgttcagttcttggaccaagatgatgatgat
gatcccgacacagagctgtacctcacgcagccctttgcatgtggaaccgcgtttgctgtc
agcgtgctggactctctcatgagcgcaacatacttcaatgacaatatcctcacactgata
cggacattggtaacaggaggagccacaccagagctggaagcactgattgctgaggaaaat
gcattgagaggaggttacagcacgccccagacacttgcaaacagggacaggtgtcgagtt
gctcagttggctttgtatgatgggccatttgcagacctaggggatggaggttgttatgga
gatctattttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcgatta
agggatgcacatctaagtactcccagccaatgcactaaacgttacgttatcacaaaccca
ccgtatgaatttgagcttgtgccgacggacttgatcttctgtttgatgcaatttgaccac
aacgctggccagtcccgagccagcctttctcattcctcccactcctcctattcttccagc
aagaagagctcatcagttcactctatcccatcaacagcaaaccgaccgaaccgcaccaag
accagggattcccgggacaaacagaatgcaacaaggatgaatagaatgggccaagaaaag
aaatggtttacagatgagccggataatgcctatcccagaaacattcaaatcaagcccatg
agcactcacatggccaatcagatcaatcaatataaatcgacaagcagcttgataccacca
atacgagaagttgaagatgaatgttga
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