Ficedula albicollis (collared flycatcher): 101808439
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Entry
101808439 CDS
T02815
Symbol
PRDM10
Name
(RefSeq) PR/SET domain 10
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101808439 (PRDM10)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101808439 (PRDM10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_2
zf-C2H2_6
zf-met
Zn_ribbon_PRDM4
SET
Zf-C2H2_ZNF451
zf-Di19
DUF629
zf-C2H2_STOP2_C
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
101808439
NCBI-ProteinID:
XP_005058706
UniProt:
A0A803VEX8
LinkDB
All DBs
Position
24:7907934..7955010
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AA seq
1163 aa
AA seq
DB search
MEHPGREEMDLKEENPQVWTESAAQEQNTAQVRFVPEGGAVAQIMYSDEQERGPAQQVVY
TADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQASLPVHNQVLPPM
EAVDGSDPLAPLQNQMERIETKEEDDEDEDEDEDGEDTDMDEWDPDPPRPFDPNDLWCEE
CNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVE
GPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQN
LVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDITEEERKVLREQEKNWPC
YECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVS
SENGEKCDEGTQDLLHFSSKGQFDEAGQAPLNGLEQREQTPVPPEPQAALEQQENHVLNI
QPQHEGSTVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQ
HLRFHGREGNCPLTCDICNKGFINSSALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHV
AIHVNDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHS
DRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMF
KCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKR
KAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKT
KMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEIS
QTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQ
LHDSQTYTQHAIQVQHIQVTEPSPATQSSSQAGGQPLSPSSQPPQQELRPSQMQTAPSTP
SQALQQQQGSSVQHTYLPSNWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTPVNTGQV
KAVTQTHYVISEGQPDLDGKQNSSLSSEVQVGVSQPTAHTDPLESQTSNQQQTTQYIITT
TTNGSGGSEVHISKPRTFSAEHE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaacacccaggcagggaggagatggacttgaaagaggaaaatcctcaggtctggact
gagtctgcagcacaggaacagaacactgctcaggtgcgctttgtccccgaggggggggca
gtggcccagatcatgtacagtgacgagcaggagcgtggccccgcacagcaggtggtttac
acagctgatggcacctcctacacctctgtggacacctcggagcacaccctcgtttacatc
caccccgtggaagctacgcagactctgtttacagatccatcccaagtggcttacgtccaa
caggatgctaccacccagcaggcatcgttaccggtgcataaccaggtattacctcccatg
gaggctgtggatggttctgatcctttagcacctctgcagaatcaaatggaaaggatagaa
acaaaagaagaagatgatgaagatgaagatgaggatgaagatggggaagacactgacatg
gatgaatgggatccagacccacctcgtccctttgatcccaatgatttatggtgtgaagag
tgtaataacgcacatccctcagtgtgtccgaaacatggacctttgcatcccatcccaaac
cggcctgtgctgaccagggcgagggccagccttcccctggtgctctatatagacaggttt
ttgggaggtgtgttctccaaaaggcgtatcccaaagcgtacacagtttgggcctgtggaa
ggacccctggtcagacagactgagctcaaagactgctatatccatttgaaggtttctctt
gataagggtgacagaaaagacagagacttgcaagaggacctgtggtttgaactctccagt
gaggctctgtgtaactggatgatgtttgtgcgtccagctcaaaaccacctggagcagaac
ctggtggcctatcagtacggccaccacatttattacaccaccattaaaaacgtggagccc
aagcaggaactcaaggtgtggtatgctgcctcctacgccgagtttgtgaaccagaagatc
catgacataactgaggaggaaaggaaggtgctcagggagcaggaaaagaactggccgtgt
tatgagtgcaatcgacgtttcatgagctcggagcagctccagcagcacctcaactcccat
gatgagaagctggacttcttcagcagagccagaggccgaggtcgtgggcgaggaaagagg
agatttggacccggcagacgccccgggcgccctcccaaattcatgcgcatggaagtatcc
agtgaaaatggtgaaaagtgtgacgaggggacacaggacttgctgcatttttccagcaag
gggcagtttgatgaggctggacaagccccattgaatgggctggagcagcgggagcagact
ccggtgccaccagagcctcaggcagcactggagcagcaggaaaaccacgtgctcaacata
cagccacagcacgaggggagcacagtgcccacacagagcaccatgacagcagatgacatg
aggcgagcaaagcgcatcaggaatgcagctctgcagcacctgttcatccggaaatccttc
cgcccgttcaaatgcctgcagtgtgggaaggccttccgggagaaggacaagctggaccag
cacctgcggttccatgggcgggaagggaactgccctttgacctgtgacatctgcaacaag
ggcttcatcaacagcagtgcccttgagagccacatgaaattccacatggaccagaaaaca
tactcctgcattttctgccccgagtcctttgaccgcttggatctgcttaaggatcatgtg
gccatccatgtcaatgatggctatttcacctgccccacctgcaagaaacgcttcccagat
tttatccaggtcaagaaacatgtgcgcagtttccattctgagaagatttaccagtgtaca
gagtgtgacaaggctttctgccgccccgacaagctgcgactccacatgctgcggcactcg
gaccgcaaagacttcctgtgctccacttgtggcaagcagttcaagaggaaggacaagctg
cgagagcacatgcagaggatgcacaacccagagagggaggccaagaaggctgatcggatc
agccgctccaaaaccttcaagccccggatcgcatccactgactatgagagcttcatgttc
aagtgccgcctctgcatgatgggcttccgccgcaggggcatgttggtgaatcatttatca
aagagacatccagacatgaaaatagaagaggtgccagagctcacgttgcccatcataaaa
cccaacagagattacttctgtcaatactgcgataaggtgtacaagagtgccagcaaacgc
aaagcacacatcctgaaaaaccatcctggtgccgagctacctccaagcatccggaaactg
cgtcctgcaggcccaggagagccagatcccatgctgagtacccacacccagctgacaggc
accattgccacccctccagtgtgctgccctcactgctccaagcaatacagcagtaagacg
aagatggtgcagcacatccgcaagaagcacccagagtttgctcagctcccgaacacaatc
catgcaccactggcgacggccgtcatcagttccacgccagctgttctcaccaccgacagc
acaactggagaaactgttgtgacaacagatttactgacccaagcaatgacagagatatcc
cagaccctcactacagactaccggactccccagggagattaccagcgcatccagtacatc
cctgtgtctcaatccacaactggcttgcagcagcctcagcacatacagctgcaggttgtt
caagtggcccaggctacctcacctcaccagtcccaacactccacagtggatgttgggcag
ctccatgactcccagacttacacccaacacgccatccaggtgcagcacatccaggtcaca
gagccatcaccagcaactcagtcatcatcacaggctgggggtcagcctttgagtccctcc
tcgcaaccacctcagcaggaactcaggccctcacagatgcagacagctccatcgacacca
agccaagccctccagcagcagcaaggctcctcagtccagcacacatatctccccagcaac
tggaactcatttcggagctactcatcagagattcagatgatgaccatcccccaagggcag
tatgtaatcacagagacagctgtgggtaccccagtcacccctgtcaacacagggcaagtg
aaagcagttactcagactcactacgtgatatctgaaggtcagcctgatctggatggtaaa
caaaactcctcactgtccagcgaggttcaggtgggtgtttcccagcccacagcccacacg
gatcccttggaatcccagacgagcaaccagcagcaaaccacccagtacatcatcacaacc
actaccaacggcagtggcgggagcgaagtgcacatctccaaacccaggactttctcagca
gagcatgagtga
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integrated database retrieval system
