Ficedula albicollis (collared flycatcher): 101808447
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Entry
101808447 CDS
T02815
Symbol
DMXL1
Name
(RefSeq) Dmx like 1
KO
K24155
rabconnectin-3a
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101808447 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101808447 (DMXL1)
Membrane trafficking [BR:
fab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101808447 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101808447 (DMXL1)
RAVE complex
101808447 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_Vps41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
101808447
NCBI-ProteinID:
XP_016160592
LinkDB
All DBs
Position
Z
Genome browser
AA seq
2979 aa
AA seq
DB search
MQQGKIAASYGKVICIFEPVSILKQNSSHHNVLHYQWQKNAQISLEAIAHNLTWDPTGTR
LLTGSNCLQLWSNVPLENPADNDSTERTGVGLGEWRCIWQCKTASQVCLMKFSPDGEFFA
TAGKDDCLVKVWYNTESWRSAVTPPGASPEDQAKELDFSFVYLAHPRSVNAFSWRKTSKF
MPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYSNWSEAANFTNNFKRSISSKEK
VQSALELNLKHFRRGRRRSGAVVAHTGYALHQQDPHEAHRNVPPHANALCHFHIAASINP
ATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKRSFEHHSSETN
TEDSNQMDGRSEEEVDENGDEQKGNQEKKELGDEKAAPYSSLVPLSSAIFDHEIEVLLSE
WSKNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCRS
IVMYACTKNVDLAIQQGKQKPPSLTRSSSMLISSGHSKSTNSLKLSIFTPNVMMISKHAD
GSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNALISPD
VEKAIQANDSFKSEESPVRPQSRGNANVTSQDPNAVYSELILWRVDPVGPLSFSGGVSEL
ARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDAKKLLCE
LSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLLHVFQEDFILNNQEKE
MPSKKNSLSDSGNQQNGFSEKFYLIVIEYTQSHSLLHMWHLHLKAIPVSIDEKIGLNPPE
EATQTEELYSSPDPEKIQSPFTQKYRACRANLQSTSWLTLSSKMVYSQQLSMPEGVEIIS
VKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVVTEASASSMPQYGTDSDVKYV
WEEWPLLIEDGLPSSSTISVPGRPTDVSCAHTNRLAVAYKQAASRDSHLSQDFVMHVSIF
ECESTGGSSWILEQTLNLDEVGTMLDSGVSVDSVDLVPDNQQDTSLSHGGSIIPNTKHLV
HLDWMSREDGSHILTVGVGSKLYMFGQLSGKRQEQNGNEIVAISHSGSPKAETLSGFVLL
RCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSSSKQELVSTDSYSGSMP
CITSLMKQSQSAASGLHPPKRILTRSMTSLAQKLSGKRSASDLSMEMEDSGLFEAAHTLS
PTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEIVAINESEPNHDKRLRSLTISAS
GSTARDPKMFSKTETTDYIEIDSVPPLPLYALLAADDDSSYSCSEKSNNQNSQNKKDVPN
DSYENLFQNTVISTDDLVPFEADEDSSKPAVIDLSQYSPTYFGPEHAQVLSRHLLHSSLP
GLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLSTALPP
VHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGVGWWVRNIHSL
RKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFTEDRWR
KAALKNAFSLLGKQRFEHSAAFFLLAGHLRDAVEVCLEKLHDIQLALVISRLYESEFEVS
STYKSVLQKRVLGSVSTGKESSGNIHCDPFLRSMAYWILEDYSKALDTLIKHSVEDEDED
GSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDASSTHICLTVENGLADKINLGERRLFFTT
AYAHLKAGCPMLALEVLSKMPKVVKRSKSFCKSPSLVDTGKDFSPYSPVNEFETKDQASS
VDWSQPVFNGLGSSSDCSSGKHSSSTLSFDWSQPTALFQDEQVQLQSDSDENDESEDSSL
VMKELKPLKKTEKLHGTSSSYTESFSVVDDKDILSPSEDIISAQLKFRACLKILTVELRT
LSTGCEVDGGKLRYQLYQWLEREVVALQKTCDYGVEVEEIQSGIRGMSEEATLHENTEDL
ADQEKTMLQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQESQQ
EQSVQLPSSPPPEQSSIPLLFACTASAKTVVADPLLHLGNLTHDILHAIINLDSPPHPDT
QNSKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTQRHSLRTASLEE
TVTPNTSPAQWPGMTALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHSSNEL
YRIMAHPLNNKMWSAIFGGGAHTHSRGQQQLKTKTDDGEKQHKHYRLSSKTSPKESSQLP
ALPLVDQQSSSDKERFIPPELSIWDYFIAKPFLPSQSRVEYDSEESQESDEDDEDNDGDM
FASNSHNQEHSNSNSYSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICHAVLKT
LQRWEQVLLRRLELYGGPPQHYISVHASEDALAAGPALLRHKTLLEPANTPFRSSSHVAL
SVKRLWQYLVKQEEVQETFIRNIFTKKRCINESLEEHNETMKNSVVEEPVISKVETDLGY
PGGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSAILATQIYTWVDDDMEIE
NKGSDDFLVIHARDDLVNVQGSTPYTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVR
RMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGNKFGIVDAD
GYISLYQTNWKCCPLTGTSPKPYLTWQCHSKTANDFVFISSSSLIATAGFSSDNRNICLW
DTLVSPTNSLVHAFICHDSGATVLAYAPKHQLLISGGRKGFTCVIDLRLKQQQQLLQSHD
SPVKAIAVDPTEEYFVTGSAEGNIKVWSLSTFNLLHTFINEHARQSLFRNIGTGVMQIET
GPANHIFSCGADGTVKMRILPDRFSPLKDVLKNDVKFMI
NT seq
8940 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggggaagattgcagcttcttacggaaaggtgatttgtatctttgagccagtt
agcatcttgaagcagaacagcagtcatcataatgtgttacattaccagtggcagaagaat
gctcaaatctcactggaagccatagcacataatctaacatgggatcccacaggtactcgc
cttctgactggctccaactgtcttcaactttggtccaatgttcctttggaaaaccctgct
gacaatgacagtactgagagaacaggtgttggacttggagagtggagatgtatctggcaa
tgcaaaactgcttctcaagtttgtttaatgaaattctcaccagatggggagttctttgct
actgctggaaaggatgactgtctagtgaaagtatggtacaacacagagagctggcggtca
gctgtaacaccacctggtgccagtccagaagaccaagcaaaagaacttgatttttcattt
gtttatttggctcatcctcgatcagtaaatgcattttcatggagaaagaccagtaaattc
atgccacgtggtgctgtctgcaatgtactcctgacttgctgtaaggataatgtttgtcgt
ctctgggcagagactttgttacccaatgacagtctgttgtatgggggaggatacagcaac
tggagtgaagcagcgaacttcacaaataacttcaagagaagtatttccagtaaagaaaaa
gtgcagagtgcattagagttaaaccttaagcacttccgacgaggaaggaggaggtcgggt
gctgttgtagcacatactggatatgctctgcatcagcaagatcctcatgaagctcacaga
aatgttcctcctcatgcaaatgccctttgccatttccatattgctgccagtatcaatcca
gccacagatattcctctactgccttctatcacatctctaagtcttggtgaaaatgaagaa
aaaagtggaccttttgttgtacactggctgaacaacaaagaacttcattttacattatct
atggaagtgtttttgcaacaacttaaaaggagttttgaacatcattcttctgagactaat
actgaggactctaatcaaatggatggcagatcagaagaagaagttgatgaaaatggagat
gaacaaaaaggaaatcaagagaagaaggaactgggtgatgagaaagctgctccatattca
agccttgttcctttatcttctgctatttttgatcatgaaattgaagttttgctttctgaa
tggagtaaaaatgctgacatgctcttcagtatacaccctgtggatggctccctgctggta
tggcacgtggactggctagatgaataccagcctggcatgtttcgccaggtgcaggtgtct
tttgtctcaagaattcctgttgcgtttccaacgggtgatgcaaactctctttgcagaagt
atagtgatgtatgcttgtaccaagaatgttgacttagctatccaacaaggcaaacaaaag
cctcccagccttactcgatcttcatctatgcttatctcttctggacacagtaaatcaacc
aacagcttaaaactaagtatcttcacacctaatgttatgatgatttccaaacatgcagat
gggtcactgaaccagtggctagtgagttttgctgaagaatctgctttttcaactgtactc
agtatttcacacaaatcccgatactgtggtcaccgttttcatcttaatgacttggcttgc
cactcagtgttaccactgctgcttacaacctcacatcacaatgctctaatttcaccagat
gttgagaaagcaatacaggcaaatgattcttttaagtctgaggagtcaccagtaagacct
cagagtagaggcaatgcaaatgtgacatcccaggatcccaacgctgtttacagtgaactt
attctttggagagtagatcctgttgggcctttgtccttttctggtggagtttctgagctt
gctcggatcaattctcttcatgtttcagctttttctaatgttgcatggctgcccacactt
atacccagctattgccttggtgcatactgtaattctccaagtgcctgctttgtggctagt
gatggacagcatttaagattgtatcaagctgtaatagatgctaagaaacttctgtgtgag
ctctccaatccagaaatttctaaatatgttggtgaagtttttaacatcataagtcagcaa
tctacagctcgcccaggatgtatcattgaactggatgccatcacagaacttcatggccgg
aaaacacagttattgcatgtttttcaagaagactttattttaaataaccaggagaaggaa
atgccttcaaagaagaacagtttatcagactctggaaaccagcagaatggattctctgaa
aaattctacttaatagtgatagagtatacacaaagccattcattactacatatgtggcat
ttacatttgaaggcaattcctgtctccatagatgaaaagataggtttaaatccacctgaa
gaagcaacacaaacagaagaattgtattcttcaccagatccagagaagatccaatcacct
ttcactcaaaagtatcgggcctgtagagcaaaccttcagagcaccagctggcttactctg
tcttccaaaatggtgtatagtcaacagttgagtatgccagaaggagtagaaataataagt
gtcaagccatcagcaggacacctcagttcttcctccatatatcctgtttgtcgtgcacct
tatctgctggctacttcctgctctgatggaaaagttcgattctggagatgcagggttgtc
actgaagcatcagcttcttccatgccacagtatggcacagacagtgatgttaaatacgta
tgggaagaatggccattactgattgaggatggacttcctagcagtagtactattagtgtt
ccagggaggccaactgatgtcagctgtgcacacacaaacagattagcagtagcgtacaag
caggcagcatctagagacagccatctttctcaagattttgtaatgcacgttagtattttt
gaatgtgaatctacagggggttcttcttggattttagaacagacgcttaatttagatgag
gtaggcactatgttggactcgggtgttagtgttgatagtgttgatttagtgccagataac
caacaagatacttctctgtctcatggtgggagtattatacccaacactaaacacttggta
cacttagattggatgtcgagggaagatggttcacatattctgacggtgggggttggatca
aaactttatatgtttggtcagctgtctgggaagaggcaagaacaaaatggtaatgagatt
gtagcaatttcccacagtggcagtcctaaggctgaaactctttctgggtttgttttgctg
cgttgtgttgacttggtttcatctgttgaggggtcacctccttttcctgtatccttgtct
tgggtgcgtgatggcattctggtagttggaatggattgtgaaatgcatgtttattcccag
tggcaatcttcttctaagcaggagctagttagtacagattcctacagtggaagtatgcca
tgcataactagcttaatgaaacaaagccagtcagctgcctcaggtctgcatccaccaaag
agaatcttgaccagatctatgaccagtcttgcacagaaacttagtgggaaaaggtctgcc
tctgatctatctatggaaatggaagattctggtctttttgaagcagctcatacgttatct
ccaactttacctcagtaccacccatatcagctattggaactcatggatcttggtaaagta
cgcagagcaaaagccattctgtcccatttggtgaagtgcattgctggagaaattgttgct
attaatgagtctgagcctaatcatgacaagaggctcagatctctgacaatcagcgctagt
ggaagtactgcaagagatcccaaaatgttcagcaaaacagagactacagactatatagaa
atagactctgttccaccattgcctctgtatgctctgcttgctgcagatgatgattcgtct
tattcctgttcagagaagtccaataatcagaatagtcaaaataaaaaggatgtgcctaat
gacagttacgaaaacctcttccaaaatactgttataagtacagatgaccttgtcccattt
gaggcagatgaagacagttcaaaaccagcagtcattgatctttctcaatacagcccaact
tactttggaccagagcatgctcaagttctttctcgtcacttgcttcattcaagcttgcca
ggtctgactaggatggagcaaatgtcattgatggctttggcagatacgattgctactacc
agtacggacattggagaaagcagagacagaagtcagggtggagagactcttgatgagtgt
ggtttaaaatttttgttggctgttcggcttcatacctttctgtcaactgcgcttcctcct
gtgcatcgagcccagctgcttcaccaaggcttatctactagtcactttgcctgggcattc
cattccgtagcagaggaagaactcctgagtatgctccctgcagtgcagaagggagatcca
acatggtcagagctcagagctatgggtgtgggatggtgggttcgaaacatccacagcctg
cggaaatgcatagaaaaggtggctaaagcagctttccaacgaaacaacgatccacttgat
gctgccattttttaccttgcaatgaagaagaaggctgttatctggggattatacaggtcc
cagaaagatactaaaatgacacagttttttggaaacaactttactgaggacagatggcgg
aaagcagcattaaagaatgctttttctttgcttggcaaacagcgctttgaacactctgcg
gcatttttcttgttggcgggacacttaagagatgcagtggaggtctgccttgaaaagctg
catgacattcagctggctcttgtaatatcaagactttatgaatcggagtttgaagtgtct
agtacttacaaatctgtactacagaagagagttttgggaagtgtgtctactggaaaagag
agctcaggaaacatacactgcgaccctttcttgcgaagtatggcatactggattttggaa
gattatagcaaggctcttgacactttgattaaacattctgttgaagatgaagatgaagat
ggttcatcaagttgcaaccctgcagtgtttaacttctataactacctaagaacacatcct
ctcttgctgagacgtcattttggctcttccgatgcatcttccacacacatttgcctaaca
gtagaaaatggcttagctgacaaaatcaacctaggtgaaagacggctatttttcaccact
gcatatgctcatctaaaagctggttgtcctatgttggccttagaagtgttatcaaagatg
cccaaagttgtcaagaggtcaaagtcattctgtaaatcccctagtttagtggatactggt
aaagatttctcaccatattctccagttaacgagtttgaaacaaaagatcaagcttccagt
gttgattggtcacagccagtattcaatggcctaggttcatcatcagattgttcatcagga
aaacattcaagttccactctttcctttgattggagccagccaactgctctattccaagat
gaacaagtgcaactgcaatcagacagtgacgaaaatgatgagagtgaagattcttccctg
gtaatgaaagagctaaaaccgctgaagaaaactgaaaaattacatggaacaagttctagc
tacacggaatcttttagtgtagttgatgacaaagatattcttagtccatcagaagatatc
atttcagcacagctgaagtttagagcatgcctgaaaatccttactgtggagcttcgtaca
ctgtccactggctgtgaagtagatggtggaaagctgcggtatcagctttaccagtggctt
gagagggaagtggtagctcttcagaagacctgtgattatggtgttgaagtagaagagata
cagtcaggaattagagggatgtcagaggaagctacattacatgaaaacactgaagactta
gctgaccaggaaaaaactatgctacagaaagaagactttcagaaaagacgtcagtggctt
ctgaaataccagtctctcctcagaatgttccttagttactgtatacttcatggctcacat
ggtggaggcttggcatctgtcagaatggaattaattctgctgttgcaggagtctcaacag
gagcagtcagtacagttaccttccagccctccaccagagcaaagctccatacctctccta
tttgcttgcaccgctagtgccaaaacagtggtggctgatccattgctacatcttggcaac
ttaactcatgacatattacatgctataataaacctagattcgccacctcatccagatact
cagaacagtaagatatacgtaatgcataccttagcagcgtcgctctctgcttgcatctac
caatgtctctgtgatggccacagctacagctcatttcaagcaaatcagttcactgggaca
gtgtaccagacagtcctgttaactcagcgtcattctttaagaacagcaagcttggaggaa
accgtgacgcccaacacatcacctgctcagtggccaggaatgacggctctaatacgtctc
ttgaattctgctggtgaggaagcccagccaggtctcacagttctactttgtgaaattcta
actgcagtctatctcagcctgttcatccatggccttgcaacccattctagcaatgagctg
tatagaattatggctcacccacttaacaataaaatgtggtctgctatctttggaggagga
gctcatacgcacagcagaggacagcagcaattaaagacaaaaactgatgatggagagaaa
cagcataaacattataggctgtcatcaaaaacctctccaaaagaaagttctcagttacct
gcattgccattagtagaccaacaatcatcatctgacaaagaaagatttatccctcctgag
cttagcatctgggattatttcattgcaaagccatttcttccatcgcaaagtagagtggaa
tatgattcagaagagagtcaggaaagtgatgaagatgatgaagataatgatggagatatg
tttgcatcaaattcacataaccaagagcattctaattcaaattcatacagttggtcactg
atgagattggcaatggttcagctggtacttcacaatttgaagattttctaccctttggct
ggacatgatctttcagagcttccagttagctccccgatatgccatgcagttctgaaaact
ctgcagcgctgggaacaagttcttctccgacgtcttgagctgtatgggggtccacctcag
cattatatttcagttcacgcttctgaagatgcccttgctgctggtcctgcattgcttcgc
cacaaaactttactcgagcctgcaaacactcctttcagatctagcagtcatgttgcattg
tctgtgaagaggctctggcaatacttggtcaaacaggaagaagtccaggaaacttttatc
agaaatatttttacaaagaagcgatgcataaatgagtcattagaggagcacaatgaaacc
atgaaaaattctgtggtggaggagcctgtcatcagtaaggtagaaacagatttgggatac
cctggtggcaaggcaagaataatccataaagaatcagacatcattactgcttttgcagtc
aataaggcaaatcggaactgcattgcaatagcatcaagtcatgatattcaagaattggat
gtttctgcaattttagctacgcaaatctatacctgggttgatgatgatatggaaatagaa
aataaagggtctgatgatttcctagttatacatgctcgtgatgatctggtaaatgttcag
ggaagcactccttatactcatagtaatcctggcacacctatcaatatgccttggcttggt
agtacacagactggcaggggtgcatctgtgatgctcaagaaagctattaataatgtcaga
agaatggcttctcatccaacactgccatattacctgacgggtgctcaagatggaagtgta
agaatgtttgaatggggtcatgcgcagcaaatcacgtgttttcgatctggtggcaactcg
agggtgactcgaatgcggttcaattaccaaggaaataaatttggaattgttgatgctgat
gggtatatcagtttatatcagacaaactggaaatgttgtccacttactggaacttcgcct
aagccatatttgacgtggcaatgtcatagcaaaacagccaatgactttgttttcatcagt
tcatcatctttgatagctacagcaggattttcttctgacaacagaaatatttgtctttgg
gatactctggtttctcctacaaacagcctggtgcatgcttttatctgtcatgatagtgga
gcaactgtgttagcatatgctccaaaacaccagctgttgatatctggaggcagaaaaggc
tttacctgtgtaattgatcttcgcctaaagcagcagcaacagttactccagagtcatgat
tctccagtcaaagcaattgctgttgatcctacagaagagtattttgtcacaggatctgct
gaaggcaacataaaggtatggagtctgtctacatttaatcttcttcacactttcatcaat
gagcatgctcgacagtctctcttcagaaacattgggacaggagtcatgcaaattgaaaca
ggaccagcaaatcacatattctcttgtggtgctgatggaacagtaaaaatgagaatcttg
cctgatagattcagccctttaaaagatgtgttaaaaaatgatgtgaagtttatgatctaa
DBGET
integrated database retrieval system
