Ficedula albicollis (collared flycatcher): 101808522
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Entry
101808522 CDS
T02815
Symbol
EIF4A3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03015
mRNA surveillance pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101808522 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
101808522 (EIF4A3)
03015 mRNA surveillance pathway
101808522 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101808522 (EIF4A3)
03041 Spliceosome [BR:
fab03041
]
101808522 (EIF4A3)
03009 Ribosome biogenesis [BR:
fab03009
]
101808522 (EIF4A3)
03012 Translation factors [BR:
fab03012
]
101808522 (EIF4A3)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101808522 (EIF4A3)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101808522 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
101808522 (EIF4A3)
Spliceosome [BR:
fab03041
]
Complex C
Other components
EJC/TREX
101808522 (EIF4A3)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
90S particles
Helicases
101808522 (EIF4A3)
Translation factors [BR:
fab03012
]
Eukaryotic type
Initiation factors
eIF-4
101808522 (EIF4A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
101808522
NCBI-ProteinID:
XP_016152425
LinkDB
All DBs
Position
3:complement(8152919..>8159195)
Genome browser
AA seq
359 aa
AA seq
DB search
LAPAGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALIL
APTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIR
RRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKF
MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDW
LTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINY
DLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttggcccccgcagggttcgagaagccgtcggccatccagcagcgagccatcaagcagatc
atcaagggcagggacgtgatcgcccagtcacagtcgggaacagggaaaacagcaacattc
tccatatctgttctacaatgcctggatatccaggttcgcgagacccaagccttgatcctg
gcaccaactcgggagctggctgtgcagattcagaaggggcttctggccctgggagactac
atgaacgtgcagtgccacgcctgcatcgggggcaccaacgtgggtgaggatatccgcaag
ctggattatgggcagcacgtggtggctggcactccaggccgggtgtttgatatgattcgt
cgcagaagtctaagaactcgtgccatcaaaatgctggttttggatgaagcagatgaaatg
ctcaataaaggcttcaaggagcagatttatgatgtgtacaggtacctgcctccagccaca
caggtggttctgatcagcgccactttgccacatgaaatcttggaaatgaccaacaaattc
atgacagaccccatccgcatcctggtgaaacgtgatgagttaaccctcgaaggaatcaag
cagttttttgtggctgtggagagggaagagtggaagtttgacaccttgtgtgatctctac
gacacgctgaccatcacccaggctgtcatcttttgtaacaccaagagaaaggtcgactgg
ctcacggagaagatgagggaagccaacttcaccgtttcatccatgcatggggacatgccc
caaaaggagagagagtccatcatgaaagagttcagatctggcgccagccgagttcttatt
tccacagacgtgtgggctcgaggcctggatgtgcctcaggtgtcgcttatcattaactat
gacctgcccaacaacagagaactgtacatccacaggatcggccgctcgggcaggtacggc
cggaaaggcgtcgccatcaactttgtgaagaacgacgacatccgcatcctgcgggacatc
gagcagtactactccacccagatcgacgagatgcccatgaacgttgctgatcttatctga
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