Ficedula albicollis (collared flycatcher): 101808524
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Entry
101808524 CDS
T02815
Symbol
HBS1L
Name
(RefSeq) HBS1 like translational GTPase
KO
K14416
elongation factor 1 alpha-like protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101808524 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101808524 (HBS1L)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101808524 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
101808524
NCBI-ProteinID:
XP_016152476
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All DBs
Position
3:58305991..58363605
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AA seq
689 aa
AA seq
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MTMRLHAGCEHKIENKDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEE
YGYEGTDSAADCFTPTHQLTEVDRARLNSCLDQMREVLAESIPEQAMVQAVLDTEFDVQK
ALDLVLSQGSKQNVKTKNKDAVILAKTTKGKTRDSQSARMESEIVPKITKMTVSGKKQSM
GFEVPCAIAEENGHTNTPQKGLLPEDATVASGVLEAVSKSTLSPQVVQVSEEQNMVPTPA
KKSSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKY
EQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNM
ITGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQ
ERFQEITSKLGQFLKQAGFKDSDVAYIPTSGLGGENLVTRGQSSDLTQWYKGNCLLEQID
SFKPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGIT
LHDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPIT
KGFPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALEL
YKDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgactatgagattacatgctggatgtgagcataaaatagagaacaaagactttgaagac
gatgatgtgtatggccaatcggtagaagatgattattgcatttctccttcaacagcagcc
caatttatttactcccgacgagacaagccagccacgtttgctgagccattagaagaagaa
tatggctatgaaggtaccgattctgctgctgattgttttacacccactcatcagttgact
gaagttgatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagag
tccataccagaacaagcaatggtgcaagcagtactggatactgaatttgatgtacaaaag
gctttggatcttgtgctttcacaaggcagtaagcaaaacgtgaagaccaagaataaggat
gcagtgattttagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatg
gaatctgaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatctatg
ggatttgaagttccatgtgcgattgctgaggaaaatggccacactaatacacctcagaaa
ggactgttacctgaagatgccactgtagcttctggggtacttgaggctgtctcaaaatct
actctttcaccccaagtggtgcaggtttcagaagagcagaatatggtgcctactccagca
aaaaagtcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaa
ggaggaaagcaactgctgaatttggtggtaataggacatgttgatgcaggcaaaagtact
ttaatgggacatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatat
gaacaggagtctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaa
actggtgaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaattcgagacg
ccaactaaagtaattacactgatggatgctccgggccacaaagactttattccaaatatg
atcacaggagctgcacaggctgatgtggcaattttggttgtggatgccagcagaggagag
tttgaggcaggatttgagacgggtggacaaactcgagagcatggattattagtgcgctct
cttggagtgacacagttggctgttgcagtcaataaaatggatcaggtcaattggcaacag
gaacgatttcaggaaattacgagtaagcttggccaatttcttaagcaagctggctttaag
gactcagatgtggcttatatcccaacaagtggccttggtggtgaaaatctagtcacaagg
ggtcagtcaagtgacctcacacaatggtataaaggaaactgtttgttagagcaaattgat
tctttcaagccaccgcagagatcagtggataaaccatttagactgtgtgttgctgacgtt
tttaaagaccaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcag
gttggagaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcaca
ctgcacgatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgacc
ggcatggatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggaacccatt
aaagtttgcactcggttcagagctcgggttctcatcttcaatattgaggttccaatcact
aaaggatttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaaga
ctgttgagtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttg
gctaaaggccagaatgctctaatagaactacaaactcaaagacctgttgccctagagttg
tacaaagattttaaagagctgggaaggtttatgttacgctacagtggctccactattgct
gcaggagttgttacagagattaaagaatga
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