Ficedula albicollis (collared flycatcher): 101808553
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Entry
101808553 CDS
T02815
Symbol
PLXNA1
Name
(RefSeq) plexin A1
KO
K06820
plexin A
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101808553 (PLXNA1)
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Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
TIG_plexin
PSI
Sema
PSI_PlexinA-B
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
101808553
NCBI-ProteinID:
XP_005053025
UniProt:
U3JZI4
LinkDB
All DBs
Position
12:10502078..10604109
Genome browser
AA seq
1894 aa
AA seq
DB search
MALAAAMWLLWLKHHLSIHIWTLLLLGSTWLPLAEGSPKSPFRTFPVTDWSLTHLVVHNK
TGEVYVGAVNRIYKLSNNLTLLRTHVTGPVEDNEKCYPPPSVQSCPHGLVTTNNVNKLLL
VDYSGNRLIACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSSVNESGTMSGVIIEVLNG
QNKLFIGTPIDGKSEYFPTLSSRKLMANEENAEMFGFVYQDEFVSSQLKIPSDTLSKFPT
FDIYYIYSFSSEQFVYYLTLQLDTQLTSPDSTGEQFFTSKIVRLCVDDPKFYSYVEFPIG
CVQDGIEYRLIQDAYLTKPGKALAKYLGISEQEDILFTIFSQGQKNRVKPPKESVLCLFT
LKKIKDKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDNFCGQDFNQPLGGTVTI
EGTPLFVDKEDGMTSVAAYDYRGQTVVFAGTRSGKIKKILVDLPAERKHQALQYENVVAH
EGSSILRDLVLSPDRQHIYAMTEKQVTRVPVESCEQYESCELCLGSRDPHCGWCVLHNIC
SRKDRCERADEPQRFASELQQCVQLTVQPSNISVTMSEVPLVLQAWNVPDLSAGVNCSFE
DFTESESRIEDGKIYCSSPSAKDVIPITRGRGDKRVVKLYLKSKETGKKFASVDFVFYNC
SVHQSCLSCVNGSFPCHWCKYRHICTHNAADCSFLEGRVKLSEDCPQILPSTQIYIPVGV
VKPITLTAKTLPQPQSGQRNYECIFHIPGSSTRVTALRFNSTSIQCQNTSYFYEGNDISD
LPVNLSVVWNGNFVIDNPQNIQAHLYKCSALRESCGLCLKADPRFECGWCVSERRCSLRQ
HCLAYDSSWMHASSGSSRCTDPKITKLFPETGPRQGGTRLTITGENLGLKFEDVRWGVRV
GKVVCIPIESEYISAEQIVCEIGDASLSKVHEARVEVCIRDCTPSYRAISPKTFTFVTPT
FSRVVPSRGPLSGGTWIAIEGTHLNAGSNVSVTIGGRPCAFSWRSAREIRCRTPPGHTPG
GAPILININRAELSNPEVKYNYTEDPTIQKIDPEWSINSGGTLLTVTGTNLATIKEPRIR
AKYCSSERENNCTVYNDTTMVCYAPSIDNPVRSPPELGDRPDEIGFVMDNVQALLIINTT
NFVYYPDPVFEPLSPTGMLELKPSSPLILKGRNLLPPAAGNSRLNYTVLIGDTPCTLTVS
ETQLLCESPNLTGQHKVTIKAGGFEFSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLIIII
VLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDINELTNDLDGAGIPFL
DYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLNKKHFLLTFIRTLEAQRSFS
MRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLT
NWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKM
LTLNCVNPENENAPEIPVKVLNCDTITQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGR
MARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQNSAYNISNSSTFTKSLSR
YESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHMDQREGDRGSKMVSEIYLTR
LLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQINDYDVRHTWKS
NCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLY
AKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYITKY
KDEILAALEKDEQARRQRLRSKLEQAIDTMALSS
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggccttggctgcggcgatgtggctcctttggctcaagcaccacttgtccatccacatt
tggaccttgctgctcttggggagcacctggctaccgctggcggaaggcagccccaaatct
ccctttaggactttcccggttacagactggagcttgacacacttggtggtccataacaag
accggggaggtctacgtgggggctgtcaatcggatctacaagctctccaataacctcacg
ctgctgcggacccacgtgacggggcccgtggaggacaatgagaagtgttaccccccaccc
agtgtccagtcctgcccacacgggctggtcaccaccaacaacgtgaacaagctgctgctg
gtggactactcggggaaccggctgattgcctgcggcagtgcctcccaggggatttgccag
ttcctgcggctggacgacctcttcaagttgggtgagccccaccaccgcaaggagcactac
ctctccagcgtcaacgagtcgggcaccatgtctggtgtcatcatcgaggtgctgaacggg
cagaacaagctcttcattgggacgcccatcgatgggaagtctgagtacttccccaccctg
tccagccgcaagctgatggccaacgaggagaacgccgagatgtttggctttgtctaccag
gatgagtttgtctcctcgcagctcaaaatcccctcggataccctctccaagttccccacc
tttgacatctactacatctacagcttcagcagcgagcagtttgtttactacctgaccctg
cagctggacacccagctgacctctcctgactccactggggagcagtttttcacctccaag
attgtccgcctctgtgtggatgaccccaagttctactcctatgtggaattccccattggc
tgcgtgcaggacggcatcgagtaccgcctgatccaggacgcctacctgaccaagcctggc
aaggctttggccaagtacctgggcatctcagagcaggaggatatcctcttcaccatcttc
tcccagggccagaaaaacagggttaagcctcccaaggagtctgtgctctgcctcttcacg
ttgaagaagatcaaggataagatcaaggagcgtatccagtcatgctacagaggagaaggg
aaactctcactgccctggctcttgaacaaggagctgggctgcatcaactcgccgctgcag
atcgacgacaatttctgcggccaggattttaaccagccgctgggcggaactgtcaccatc
gaggggaccccgctctttgtggataaggaggacgggatgacctcggtggctgcctatgac
tacagaggacaaactgtcgtctttgcaggcacacggagcgggaagatcaaaaagatcctc
gtggatttgccagctgagaggaagcaccaagctctgcagtatgagaatgttgtggcccac
gaaggcagctccatcctgcgagacctggtgctgagccctgaccgtcagcacatctatgcc
atgactgagaaacaggtgacgcgtgtgccggtggagagctgtgagcagtacgagagctgc
gagctgtgcctgggctcccgggacccccactgcggctggtgtgtcctccacaacatctgc
tcccgcaaggaccggtgcgagcgggcggacgagccgcagcgcttcgcctccgagctgcag
cagtgcgtgcagctcaccgtgcagcccagcaacatctccgtcaccatgtccgaggtcccg
ctggtcctgcaggcctggaatgtcccagacctctcagcaggagtcaactgctcctttgaa
gacttcactgagtcagagagccgcattgaggatgggaagatctactgcagctctccctct
gccaaggatgtcatccccatcaccaggggccgcggggacaagcgagtggtgaagctctac
ctgaaatccaaggagacagggaagaaatttgcctccgtggattttgttttctacaactgc
agtgtccatcagtcctgcctgtcctgtgtgaacggctccttcccctgccactggtgcaag
taccgccacatctgcacccacaacgctgctgactgctctttcctggagggacgtgtcaag
ctctctgaggactgcccccagatcctgccttccacgcagatctacatcccggtgggcgtg
gtgaagcccatcacgctgacggccaagaccctgccgcagccgcagtcggggcagcgcaac
tacgagtgcatcttccacatccccggcagcagcacgcgcgtcacggcgctgcgcttcaac
agcaccagcatccagtgccagaacacctcgtatttctacgaaggaaatgacatcagtgac
ctgcccgtcaacttgtctgtggtctggaacgggaactttgtcattgacaacccccagaac
atccaggcccacctgtacaagtgctcggcgctgcgggagagctgcgggctgtgcctcaag
gccgacccgcgcttcgagtgcggctggtgcgtgtcggagcggcgctgctccctgcgccag
cactgcctggcctacgacagcagctggatgcacgccagcagcggcagcagccgctgcacc
gaccccaagatcaccaagttgttccctgagactggccccaggcaaggagggacccgtctg
accatcactggtgagaacctgggcctgaagtttgaagatgttcgctggggtgtccgagtg
ggcaaagtggtgtgcatccccatcgagagcgagtacatcagtgctgagcagattgtgtgt
gaaatcggagatgccagcctgagcaaggtgcatgaggcacgggtagaagtgtgcatccgt
gactgcacgcccagctaccgggccatatcccccaagaccttcacctttgtgacgcccact
ttctcccgtgttgtcccatcccggggtcctctctctggtggcacctggatcgccatcgaa
ggcacccacctcaacgctggcagcaacgtgtccgtgaccattgggggacggccctgcgct
ttttcatggagaagcgcccgtgagattcggtgcaggacccccccagggcacacccccggc
ggtgcccccattctcatcaacatcaaccgggcagagctgagcaacccagaggtgaagtac
aactacacagaggaccccaccatccagaagattgatcctgaatggagcatcaacagcggt
gggacactgctgactgtgactggcaccaacctggccaccatcaaagagcccaggatccgg
gccaagtactgcagctctgaaagggagaataactgcactgtctacaatgacaccaccatg
gtgtgctacgctccctccattgacaaccctgtgcggagccctccggagcttggcgaccgc
ccagacgagattggctttgtcatggataacgtgcaggccctgctgatcatcaacaccacc
aattttgtctactacccagaccctgtctttgagccactcagccccacagggatgctggag
ctgaagcccagctctcccctcatcctcaagggcaggaacctgctcccaccagctgctggc
aactcccgcctcaactacacggtgctgatcggagacactccctgcaccctcacggtctct
gagacacagctgctctgtgagtcccccaacctcactggccaacacaaagtcacaatcaag
gctggagggttcgagttctctccggggacgctgcagatctactcagacagcctgctcacc
ctgcccgccatcatcggcatcggcggcggcggcggcctgctcctcctcatcatcatcatc
gtcctcatcgcctacaagcgcaagtcccgcgacgctgaccgcaccctgaaacgcctgcag
ctgcagatggacaacctggagtcccgggtggccctggagtgcaaagaggcctttgctgag
ctgcagacagacatcaacgagctgaccaacgacctggatggggctggcatcccctttctg
gattaccgcacctacgccatgcgggttctcttcccggggatagaagaccaccctgtgctg
aaagagatggaggtccaggctaatgtggagaagtccttgaccctctttggccagctcctg
aacaagaagcacttcttgctgaccttcatccgtacgctggaggcccagcggagcttctcc
atgcgggaccgcggcaacgtggcctcgctcatcatgacagcgctgcagggagagatggag
tatgccacaggggtgctgaaacagctcctctccgaccttattgagaagaacttggagagc
aagaaccaccccaagctgcttctgcggagaacggagtcggtggcagagaagatgctgaca
aattggttcacgtttctgctgtacaagtttctgaaggagtgtgctggggaaccactcttc
atgctctactgtgccatcaagcagcagatggagaagggacccattgatgccatcacagga
gaggctcgctactccctcagtgaggacaagctcatccggcagcagatcgactacaaaatg
ctgaccctcaactgtgtgaaccccgagaatgagaatgccccagagatccctgtcaaggtg
ctgaactgcgacaccatcacgcaggtgaaggagaagctgctggatgctgtctacaagggt
gtgccctattcccagcgacccaaagctggagacatggacctggagtggcggcagggcagg
atggcccgcatcatactgcaggatgaggatgtcaccacaaagattgacaatgactggaag
aggctgaacaccctggcccactaccaggtgacagatggctcttcagtagccctggtgccc
aagcagaactcagcatacaacatctccaactcctccaccttcaccaagtccctcagcaga
tatgagagcatgctgaggacagccagcagccccgacagcctgcgctcacggacccccatg
atcacccctgacctggagagcggcacgaagctctggcacctggtgaagaaccacgaccac
atggaccagcgggagggcgaccggggcagcaagatggtctctgagatctacctgacccgc
ctgctggccaccaagggcaccctgcagaaatttgtggatgacctgtttgagaccatcttt
agcacagctcaccgtgggagtgcactgcccctcgccatcaaatacatgtttgatttcctg
gatgaacaagctgataagcatcagatcaatgattatgatgtcaggcacacctggaagagt
aactgtctacctctgcgtttttgggtgaatgtgattaagaacccccagtttgtgttcgac
attcacaagaacagtattactgatgcctgcctatctgtggtggctcagacattcatggac
tcctgctcaacttctgagcacaagctaggaaaggactctccctccaacaaactactgtac
gccaaggacatccccaactacaagagctgggtagaaagatattatgcagatatagctaaa
atgccagcgatcagtgaccaggacatgagcgcgtacctggcagagcagtcgcggttacac
ctcagccagttcaacagcatgagcgccctgcacgagatctactcctacatcaccaagtac
aaggatgagattttggccgcgctggagaaggacgagcaggcacggcggcagcggctgcgg
agtaagctggagcaggcgatcgacacaatggccttaagcagctga
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