Ficedula albicollis (collared flycatcher): 101808717
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Entry
101808717 CDS
T02815
Symbol
NVL
Name
(RefSeq) nuclear VCP-like
KO
K14571
ribosome biogenesis ATPase
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101808717 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101808717 (NVL)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101808717 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_2
TIP49
AAA_28
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_33
nSTAND3
Vps4_C
ABC_tran
AAA_17
AAA_18
Viral_helicase1
NACHT
nSTAND_NTPase5
TsaE
Rad17
Zeta_toxin
AAA_3
IstB_IS21
NB-ARC
ATPase
Parvo_NS1
Sigma54_activat
Sigma54_activ_2
DUF815
Motif
Other DBs
NCBI-GeneID:
101808717
NCBI-ProteinID:
XP_005043089
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All DBs
Position
3:17093486..17133058
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AA seq
881 aa
AA seq
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MDIGTGCPGRWWGHRPWRCLRKDGMWRSVDTVVLGHELESMLSEYLASSKCGEYVDIGIL
ASDLQKTYSVDYGRRKRNAFRIQVAKVFEIISNEKEREDLAVLESEHVAKRARQQEKNGT
TGSGTDDSDYDDYPEDLSANQMNSSLLSLYKKGNPDSVPPTPQNDPVETSPCVRTAPQTS
TLTPGSRGERWISDGGWFIDKTPDGKDFFIDLSEDGEGEEKRPISEKSTEFSVLESERKK
TKGRRAKRKKGEFADVDGEIESMLLKKVRNKGSELYHPSVKFEDVGGNDETLKEICKMLL
HIRHPEVYTHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELQLPMLKVAATEIVSGVSGES
EQKLRELFEQAVSSAPCVLFIDEIDAITPKREVASKDMERRIVAQFLTCMDDLNNVAATT
QVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGAREKILQTLCRKLKLPEGFEFRHL
ARLTPGFVGADLMALCREAAMGTVNRVLITSEQHRREHTHSGGSTAEGSPGTGTDILVEE
GTNQPELPPKDELQRLLGLLKEQAPLPEEQLQKLCIEMNDFIVALSSVQPSAKREGFVTI
PDVTWADIGALQDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAV
ANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDHES
GASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRL
AILKTITKDGTRPPLESDVSLEEIAYSQHCDCFTGADLSALVREASVCALRQEMALKNTQ
SKKGEIRISRKHFEEAFRKVKSSVSKQDRIMYEELHQSLCS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggacattggaacgggctgcccagggaggtggtggggtcaccgtccctggaggtgttta
aggaaagatgggatgtggcgctcagtggacacggtggtgctcggtcatgagctggagtcg
atgctctcagagtatcttgcaagtagtaaatgcggggagtatgttgacattggaattcta
gcatctgatttgcagaaaacctacagtgtagattatggacgaagaaaaagaaatgccttt
agaatacaagttgcaaaagtgtttgaaataatcagtaatgaaaaagaacgtgaagatttg
gcagttttagaatctgaacatgtggcaaaaagagcaagacaacaagagaaaaatgggact
actggaagtggcacagatgactctgactatgatgattatccagaagatttatctgcaaac
cagatgaacagttccttgttaagcttatacaagaaaggaaatcctgattctgttccaccc
actccacaaaatgacccagtggagacctctccttgcgtgagaacagcacctcaaacaagc
accctcacaccaggatccagaggtgaaagatggatctctgatggtggctggttcattgat
aaaactcctgatgggaaagacttcttcattgacctttctgaggatggggaaggagaggaa
aagagacccatttctgagaaatcaacagaattttctgtcttggagagtgaaagaaagaag
acaaagggcaggagagcaaaaagaaaaaaaggagaatttgcagatgtagatggggaaatt
gaatccatgttacttaagaaagtgagaaataagggttcagagctttaccacccttcagtg
aagtttgaggatgtaggaggcaatgatgaaacattaaaggaaatatgcaagatgctcctc
cacatccgtcatcctgaggtttacacccacttaggagtggttccacctcggggctttctt
ttacatgggccaccaggatgtgggaagacactgctggcgcaggcaattgctggggagctt
cagctcccaatgttgaaggtggcagcaacagagattgtgtctggagtgtcgggggaatct
gagcagaaactgagggaactgtttgagcaggctgtgtccagcgctccgtgtgtccttttc
attgacgagatcgatgcgatcaccccaaagagagaagtcgcatcgaaggacatggagcgg
aggattgtagctcagttcctgacttgcatggatgacttgaataatgtggctgcaactacc
caggtccttgttattggagcaacaaacagacctgactctctggaccctgcactgaggaga
gctgggagatttgacagagaaatttgtttagggatcccagatgaaggggcaagagagaag
attcttcagactttgtgtcgaaaactgaagctgcctgaggggtttgaattccgtcatttg
gcacggctgactccgggctttgtgggggctgatctgatggccctgtgccgtgaggcagcc
atgggcacagtcaacagggtcctgataacttctgagcagcacaggagggaacacacacac
tctggggggagcacagctgaaggaagcccagggacaggaacagacatcctggtggaagag
ggcaccaaccaaccagaacttccacctaaggatgaattgcagagacttttgggtttgctg
aaggagcaggcccccttgcctgaggaacagctgcagaagctgtgcattgagatgaatgat
tttattgttgcactgtcatcagtgcagccctctgccaagagagaaggctttgtcaccatc
cctgatgtgacatgggcagacatcggagccctgcaggatgttcgggaggagctgactatg
gcaatattggctcctgtgcgaaacccagagcagtttaaagctctgggcctgactactcca
gctggtgtcctgcttgcagggcctccagggtgtggcaaaacactattagctaaggctgtg
gcaaacgagtctgggctgaacttcatatctgtgaaaggtcctgagctgctaaatatgtat
gttggtgaaagtgaacgtgctgtacgtcaggtattccagcgtgccaggaattcagccccc
tgtgtaatattctttgatgaagttgatgctttgtgccctcggaggtctgaccatgaatca
ggagccagtgtgcgggtagtgaaccagctcctcacagagatggatgggctggagaatcgc
cagcaggttttcattatggcagccacaaacaggccagatataattgacccagctatcctg
cgtcctggtaggctggataaaacactctatgtgggtttgccaccacctgaagatcgactt
gctattttgaagaccatcaccaaagatggcacccggcctcccctagagagtgatgtgagc
ctggaggagattgcttacagtcagcactgtgattgtttcacaggggcagacctttcagct
ctcgtgcgtgaggcttctgtttgtgccttgagacaggaaatggccctgaagaatactcaa
agcaagaagggagaaatcaggatttctcgtaaacattttgaagaagcttttaggaaagtg
aagtcttcagtgtccaagcaggatcgaataatgtatgaagaactgcatcagtcgctgtgc
agctga
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integrated database retrieval system
