Ficedula albicollis (collared flycatcher): 101808858
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Entry
101808858 CDS
T02815
Symbol
RRP12
Name
(RefSeq) ribosomal RNA processing 12 homolog
KO
K14794
ribosomal RNA-processing protein 12
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101808858 (RRP12)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
90S particles
Other 90S particles
101808858 (RRP12)
Pre-60S particles
Other pre-60S particles
101808858 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
101808858
NCBI-ProteinID:
XP_016154899
LinkDB
All DBs
Position
6:22595742..22608003
Genome browser
AA seq
1317 aa
AA seq
DB search
MAAGAGSGNGAVGAAARGAGSSMARSGRLRSGTAAKLKRWRKGHSSDSNPETRQHRLAAR
SRFCSRPAEKSNLTVDAVKLHNELQSGSLRLERASDSAQFRMEQDSAEEAATEKSSGTFL
SGLSDCTNITFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKESETEYFAALMTTLE
AVESPESLSAVAYLLNLVLKRVPSPVLIKKFSDASKAFMNIVSSQACSSSTSALRWVLSC
LATLLRKQDLAAWSYPITLQVYHGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAAP
EHHPAAPSTAKFCVQEIEKAGGAKEATTTLHVLALLRDVLPCFPAAVVKTCCETLLRVMT
LSHVLVTACAMQAFHSLFSAQTSVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTME
RAHINLGRLQKDLCWAHLPRLFSAAMNCFLSPHSQVVSAAAQTLETLLSECIAPHMEDIS
TVSASAPAPAAYLCKMFRSVEEGLTYRFHAAWDQVLRVLEVFFETCGKQCHPIMRKCLQS
LCDLRLSPHFPYTAEVDQAVGAAVSTMGPEVVLETVPLEINGKEETLDFPRSWLLPVLRD
NVQGARLGFFTSYFLPLAAALKSRALEFTQAGKSVEAKIYDTLQWQVWTLLPGFCTHPTD
VQGAFKGLARTLGMAISERPDLRPTVCQALRTLIHKGCQTDAERVEVGRFAKNFLPILFN
VYSQPEEDGGTSAQRRSVLDTVRAYLTITDPQMVCGFLEKASAKLTSPESSEFTRLSILD
LIVAMAPYADEQSLDSLYRTIQPSLQSKEHSMQKKAYRVLEEVCAAPHAPCQAFVRSHLQ
DLQAALLDTLKSAASPAKRPRLKCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGARK
NAFMLLVEMGHAFIRFGPTPEEAVQRFLLLIYVGLTGSVTMISCTVLALTRLFFEFKDHL
EFSVVEQLLQNICLLLASRTRDVVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSDD
MRRHFRMKLRNLFIKFIRKFGFELVKGLLPAEYHKVLVNIRKAESRSRKQRALKKAAADM
DEEEAPPPQPRGDSMEEILADSEEEEEEEEERHRSKEWRKQARQKGQAWLKEGEDDEPLN
FLDPNVSQRVLATKPGPKRSRGVSHDFQMSEDGRLIIHEEEEELDDDEDKGADEEMADVL
QDVGLRSKKSQKRRFREDPDDEEAEAGTYSQYKAGGSGIHRPLKKEPAFGAEYRSKKGKG
DVKKKGQLDPYAYIPLNRAKLNRRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKAQRS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggcgccggaagcggaaatggggctgtgggcgcggccgcacgtggagccggg
tccagcatggcgcggagcgggaggctccgctcggggaccgcggccaagctgaagcgctgg
cggaagggccacagcagcgactctaatcccgagacccgtcagcatcgtctggctgcccgc
agccgcttctgcagccgccccgcagagaaaagtaacttgacggtggatgcggtgaagctg
cacaatgagctgcagtcggggtccctgcgcctggagcgggcgagtgacagtgctcagttc
cgtatggagcaggacagtgctgaagaggctgccacggagaagtcctctggcaccttcctg
agcgggctgagcgactgcaccaacatcaccttcagcaaggtgcagcgcttctgggaatcc
aactctgctgctcacaaagagatctgtgccgtgctggcggctgtgacagaggtgatccgc
tcccaggggggcaaggagagcgagacggaatactttgctgcactgatgaccacgctggag
gcagtggagtcccccgagtcactgtctgctgtcgcctacctgcttaaccttgtcctaaag
cgggtcccgagtcctgttcttattaaaaagttctcagatgcttcaaaagccttcatgaat
atcgtgtcctcacaggcctgcagcagttccacctccgccctgcgatgggtcctctcttgc
ctggccacactactacggaagcaagatttggcagcctggagctatcccatcaccctgcag
gtctatcatggcttgctgagcttttgtgttcataccaaacccaaggtgcggaaagcagcg
cagtatggcgtgtgctctgtcctgaggggcagtgagttcatgtttggcgatgcagcccct
gagcatcaccctgcagcaccctccaccgccaagttctgtgtgcaggagattgaaaaagct
ggaggtgccaaggaggccaccaccaccctgcatgtccttgccctgctgcgggatgtgctg
ccctgcttccctgcagctgtggtaaagacctgctgtgagaccttgctccgagtcatgacc
ctcagccatgtgctggtgacagcatgtgccatgcaagctttccacagcctcttcagtgcc
cagaccagtgtggcctgcctgccagctgagctcaatgcccagatcattactgctctctac
gactatgtgcccagcacgagtgacctgcagccactgctgacctggttgtccaccatggag
cgggcacacatcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgg
ctcttctctgctgccatgaactgcttcctctccccacactcccaggtggtgtcagcagca
gcacagaccctggagactctcctgagtgagtgcattgctccccacatggaggacatcagc
actgtgtctgcatctgccccagcccctgctgcctacctgtgcaagatgttcagatcagtg
gaggaagggctgacataccgtttccatgcagcgtgggatcaagttctgcgagtgttggaa
gtcttcttcgagacatgtgggaagcagtgccatcccatcatgaggaagtgtctccagtcc
ttgtgtgacctgcgtctctccccacactttccctacacggctgaagtggaccaggcagtg
ggggctgctgtgagcaccatgggtcccgaggtagtactggaaactgtgcccctggagatc
aatggcaaggaggagacgctggatttcccccgcagctggctcctgccggtgctgcgggac
aacgtgcagggtgcgcggctcggcttcttcaccagttacttcttgcctttggcggccgct
ctgaaaagcagagccctggagtttacccaggctgggaagagtgtggaggccaagatctac
gacacgctgcagtggcaggtctggactctgctgcctggcttctgcacccatcccacagac
gtgcagggggccttcaaggggctggcccgcaccctgggcatggccatcagtgagcgcccg
gatctgcgccccactgtgtgccaggctttgcgcaccctcatccacaaaggctgccagaca
gatgcagagcgggtagaagtgggtcgctttgccaaaaatttcctgcccatcctgttcaac
gtgtacagccagcctgaggaggatgggggcacaagtgctcagcgccgctctgtgctggac
actgtccgtgcttacctgaccatcacggatcctcagatggtgtgcggattcctggagaaa
gccagtgcaaagctgacgagtcctgagagttccgagttcaccagactctccatcctggac
ctgatagtggcaatggcaccctatgctgatgagcagtccctggactccctgtaccgtacc
atccagccttccctccagagcaaagagcacagcatgcagaagaaggcataccgtgtgctg
gaggaggtgtgtgctgctccccacgctccctgtcaagcctttgtccgctcccacctccag
gacctgcaggcagcactgctggacacgctcaagagcgcagcatccccggccaagaggccc
cgactgaaatgcctgttccacattgtgaagcagctttctgcagagcatgagccttttgtc
actgctcttgtcccagaggtcatcctatgcaccaaggaggtgtcagtgggggcccgcaag
aatgccttcatgctgctggtggagatggggcatgctttcatccgctttggacccacccct
gaagaggctgtgcagcggttcctgctcctgatctacgtggggctcactggctcagtcacc
atgatcagctgcactgtgctggcactgacccgcctgttcttcgagttcaaagatcacctg
gagttcagcgtggtggagcagctcctgcagaacatctgcctgttgctggcctcccgcacg
cgggatgtggtcaaggcagccctgggattcctgaaggtcacactgctcctggtggacacc
aagctgctggccaagcatgtccagaccatgctggaggctgtggggaacctttcagatgac
atgagacgccacttccgtatgaagctgcgaaacctcttcatcaagttcatccgcaagttt
ggctttgagctggtgaaggggctgctgccagctgagtaccataaggtgctggtgaacatc
cgcaaggcggaatcccggagccgcaagcagcgtgccctgaagaaggcggctgcggatatg
gatgaggaggaggcaccgccaccacagcccagaggagacagtatggaggagatcctggct
gactcagaggaagaggaggaggaagaggaggaacggcatcggagcaaggagtggaggaag
caagcacggcagaagggccaggcatggctcaaggaaggggaagatgatgagcccctcaac
ttcctggaccccaatgtgtcccagcgggtgctggccacaaaaccaggccccaagcggtcc
agaggagtgagccatgatttccagatgtctgaggatggacgcctgatcatccatgaagag
gaagaggagttggatgatgatgaagacaaaggagcagacgaggagatggcagatgtgctg
caagatgtggggctccgcagtaagaagagtcagaagcgtcggttcagagaggatccagat
gatgaggaagctgaggctggaacctattctcagtataaagctggaggctctgggatccat
cggccgctgaagaaggagccagcctttggtgcagagtatagatccaagaaaggtaaaggt
gatgtgaagaagaaaggccagctcgacccctatgcctatatccccctgaacagagctaaa
ctcaacagaaggaagcgggcgaagatgcagggccagttcaaggggctgatgaagggagcg
cagcgcggggccaaggccggccgcaggaaccgtctgaaggctcagcgctcctga
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