Ficedula albicollis (collared flycatcher): 101809033
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Entry
101809033 CDS
T02815
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta 1
KO
K05636
laminin, beta 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04510
Focal adhesion
fab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101809033 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101809033 (LAMB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
101809033
NCBI-ProteinID:
XP_005039194
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All DBs
Position
1A:complement(14801885..14846857)
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AA seq
1723 aa
AA seq
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MLIIVLFQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVTI
QLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGETWQVYRYFAYDCESSFPGISTGPMK
KVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHTL
GDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLDEEVEGMVHGHCMCRHN
TKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNSSGGVCD
ECQHNTMGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLIA
GQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCKR
LVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCNQV
EPGYYFISLDHYIYEAEEADLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFHIDN
IPYSMEYDVLIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSRY
VVLPRPVCFEKGLNYTIRLELSQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSGE
DVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLSS
VCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHARGSYNAFCDVETGQCHCF
PGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTTGHNCERCQAGYY
GDPILGSGDHCRPCPCPDGPDSGRQFANGCYQDPITLQVVCVCSVGYIGSRCDECASGFF
GSPDEVGGACQPCQCNNNIDTMDPEACDKRSGACLKCLYHTEGENCHLCREGYYGSALQQ
DCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGTGCE
QCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPSVECLACDCNPRGIQTP
QCDRATGQCICNEGVEGLHCDKCSRGYSGFFPDCVPCHQCFALWDVIISELANRTQQFLD
RANTLKITGVTGPYQQTLNTLEEKLTEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVTV
KIADIEENLSALAAKSNSTDTDLSALETDAKSLNHVVKELAEQLEFIKISDVRGALDSIT
KYFQMSLEAEERVNASTVDPDSALELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDELA
GKLQSLDLSEVAEKTCGAAPGASCESECGGLTCRTDDGKKKCGGPGCDGLVTVAHNAWQK
AMDFDRDILSALAEVEELSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLRNL
IKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVILQQ
SAGDIARAEMLLEEAKRASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKGT
QDLLTSIESENAASAETLNNATLRLFELEKSVEDLRQKAATNSGNVGNIEDKITSAKQNA
EEVKKVLNNELSGKYRTVEELIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLKDL
ENMYENNQKVLEDKAKQLVELEATVRSLLQTISQKVAVYSTCL
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgctgattatcgtgttgtttcaggaggacaaaaaatgcttcatatgtgactcggaggat
cccttccacgataccctcaatcccgacagtcaccgcattgaaaatgttgtcaccacgttc
gctccaaatcgcctgaagctctggtggcagtcggaaaatggtttggaaaatgtgactatc
cagctggacctggaggctgagtttcatttcactcatctcattatgaccttcaagacattc
cgtcctgctgcaatgttgattgaaagatcatctgactttggagagacttggcaagtttac
agatattttgcatatgactgtgagagctcatttcctgggatttcaactggacccatgaag
aaagtggatgatataatttgtgattcccgatactctgacattgaaccttcaacagaggga
gaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagtccaagg
attcagaacctactaaagatcacaaatctgagagtcaaattcgtcaagctgcacactctg
ggagataacctgttggactccaggatggagatccgagagaagtactactatgccatctac
gacatggtggttcgcgggaactgcttctgctacggacacgccagcgagtgtgcgcccgtg
gagggcctggatgaggaggtggaaggaatggttcatggtcactgcatgtgcagacataat
accaagggattaaactgtgagcagtgtttggatttctaccatgacttaccgtggcgcccc
gctgaaggtcgcaatagtaacgcatgcaaaaagtgtaactgcaatggccactccagccag
tgccactttgacatggccgtgtacatgacgacggggaacagcagcgggggagtgtgcgat
gagtgccagcacaacaccatgggccgcaactgcgagcagtgcaagcccttctacttccag
cacccggagagagacctgcgggaccccgacgtctgcgagccttgcaactgtgacccagct
ggctcccaaaacggtgggatctgtgaccgctacacagatttctccactggcctcattgcc
ggacagtgccgttgtaaattgtttgtcgagggggagcgttgtgacctctgcaaagaaggt
ttctatggcctgagtgctgatgacccagcaggttgtcagtcttgtgcatgtaatcctctg
ggtacccaccccggggggaatccgtgtgattcggagacaggaaactgctattgtaagcgt
ctggtgacaggaaagcagtgcaatcaatgtctgcctgagcactggggcctgagcaatgac
atggatggatgtcggccgtgcgattgcgaccagggaggagctctgaacaacaactgctcc
agtgaatctggccaatgtgaatgccggccccacatgtttggacgtcagtgcaaccaggtg
gagcctggctattacttcatttcacttgatcattacatctacgaggcagaggaagctgac
ttgggtcctggagtgaacataatagagcgccagtacacaccagaccgcacaccgtcatgg
acaggcataggatttgtgagagtccctgagggggcatacctggaattccacattgacaac
atcccctactccatggagtatgatgttctgatccgctatgagccacagttacctgatcag
tgggaaaaagctgtgatcagtgtctcgcgcccaggcaagattcccacaggtagccgatgt
ggcaacacagttcctgatgatgataatcaggtggtctcattgtcacctggatccagatat
gttgttctcccacggcccgtgtgcttcgagaaggggctgaattacaccatccgcctggag
ctgtcccagtactcctcggtggatacagagacagagaacccatacacgctcattgactct
cttgttctcatgccatactgcaaatcgctggacatattcacagtgggaggctcgggcgaa
gatgtggtcacgaacagtgcttgggaaactttccagagataccggtgtttggaaaacagc
aggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatttct
gcactgctgcatgagactgcattatcatgccagtgtgacccgcagggctccctgagttcg
gtgtgcgaccccaatggaggacagtgccagtgtcgtcccaacgttgttggaagacagtgc
gacagatgcgcccctggcacctttgggtttgggccgagtggatgccgaccatgcgagtgc
cacgcccgaggctcttacaatgccttctgcgacgtggagacgggccagtgccactgcttc
cctggcgtgtatgggcggcagtgcgaccgctgcctgcccagcttctggggcttccccagc
tgccagccctgccactgcaatggccacgccgacgactgcaacccctacaccggggagtgc
ctgagctgccgggaccacacaaccgggcacaactgtgagaggtgccaggctggctactat
ggagaccccatcctgggatcaggtgaccactgccgcccctgcccttgccctgacggcccc
gacagtggacgccagtttgccaatggctgttaccaggatccaatcacactgcaagtcgtg
tgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttcttt
gggagccccgatgaggttggaggtgcctgccagccttgccagtgcaacaacaacatcgac
accatggacccagaggcctgcgacaagaggagcggagcgtgcctgaagtgcctgtatcac
accgagggtgaaaactgccacctctgcagagagggctactacgggagtgccctgcagcag
gactgcagaaagtgcgtctgcaactacctgggcacagtgcgggaggactgcgagggctcg
gagagctgccgctgcgaggcggccacagggcagtgccgctgcctgcccaacgtggtgggc
cagacgtgtgaccgctgtgccccccacacgtggcgcctggccagcggcacgggctgcgag
cagtgcgactgcgaccccgcgcgctccctgggcccggcctgcaacgagttcacaggacag
tgccactgcatgccaggttttggaggccggacctgccgggagtgccaggagctcttctgg
ggtgacccaagtgtggagtgcttagcatgtgattgcaaccctcgtggcatccagaccccg
cagtgtgaccgtgccactgggcagtgcatctgcaatgaaggggtggaagggctgcactgt
gacaagtgctcccggggctactccggcttcttccctgactgcgtgccatgccaccagtgc
tttgccctctgggatgtgatcatcagcgagctggctaataggacccagcagttcttggac
agggctaataccctcaaaatcactggagtcactggcccataccagcagacactcaacaca
ctggaggagaagctcactgaaattaaaaccatcatcgctcaaaatccagcagctgagccc
ctgaagaacattgggaatctctttgaggaagcagaaaagctgacagcagatgttacagtt
aagatagctgacatagaagaaaacctatcagccttagcagcaaagagcaatagcacagac
acagacctgagcgcactggaaacagatgccaaaagtctcaaccacgttgtgaaagaactt
gcagagcagctagagttcatcaagatctctgatgttcggggagccttggatagtatcacc
aagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgttgatccc
gacagcgccctggagctgtcagcgcaaacgcggcaggaagtggaagacttaatcaatgag
aaggaggcccagttcaaggctaaacaagaggagcagtcgcgcctgctggatgaacttgct
ggcaagctgcagagcctggatctgtctgaggtggctgagaagacatgtggcgctgctccg
ggagcctcctgtgagtccgagtgcgggggtttgacctgtcggacggatgacgggaagaag
aagtgtggaggccccggctgcgatgggctggtgactgtagctcataacgcctggcagaag
gctatggattttgacagagacatcctcagtgcattagcagaagttgaggaactctccaga
atggtttctgaggcaaaacagagagcagatgaagctaaacaaaatgcacaagctgttttg
ctcaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctgagaaatctt
attaaacagattagagacttcctaatgcaagacagtgctgacctggatagcattgaggca
gtggctaatgaagtgctgaacatggagatgccaagcacgccccagcagctgcaggccctg
acagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcattctgcagcag
agtgctggagacattgccagagcagaaatgctattggaggaagctaaaagagcaagcaaa
ggtgcaacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaagctgaa
aaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaaggaact
caagacctgctgacttcaattgaatctgaaaatgcagcatctgcagaaacactgaacaat
gctaccttacgtctgtttgagcttgagaagagtgttgaagaccttaggcaaaaggctgct
acaaattcagggaatgtgggaaatatagaagacaaaattactagtgcaaaacaaaatgct
gaagaagttaaaaaggtcctcaacaacgagctgagcggcaagtacagaaccgtggaggag
ctcattgccaagaagacagaggagtcggctgaggccaggaggaaagcaggcgtgctgcaa
gatgaagccaaagccttgttggctcaagcaaacagcaaactccagctgctcaaagatttg
gaaaatatgtatgaaaacaatcaaaaagttctggaagacaaagccaagcagttggtggag
ctggaagcgacagttcgctccctcttacagacaatcagccagaaagttgctgtttatagc
acttgcttataa
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integrated database retrieval system
