Ficedula albicollis (collared flycatcher): 101809044
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Entry
101809044 CDS
T02815
Symbol
TRIP13
Name
(RefSeq) thyroid hormone receptor interactor 13
KO
K22399
pachytene checkpoint protein 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101809044 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101809044 (TRIP13)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
101809044 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
AAA_18
Viral_helicase1
AAA_14
RuvB_N
AAA_5
IstB_IS21
NPHP3_N
AAA_28
AAA_25
Cytidylate_kin
TsaE
AAA_24
bpMoxR
RNA_helicase
ATPase_2
NACHT
DUF815
AAA_33
AAA_30
ABC_tran
AAA_7
AAA_11
AAA_17
TIP49
PduV-EutP
KAP_NTPase
Rad17
Mg_chelatase
AAA_19
AAA_3
ATPase
PhoH
SLFN-g3_helicase
NB-ARC
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
101809044
NCBI-ProteinID:
XP_005041484
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Position
2:59246129..59259651
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AA seq
432 aa
AA seq
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MDDAAGELKQALPNVCDSVQIHVEVHQKSSSVAKKEDIRISVLKLLNRHNIVFGDYKWTE
FDDAFLNNNVQSVSIVDTELKLKDRQPIDLSISSLSLHIFHLNEEGPTSENLEEENEDIT
AAHHWVLPAAEFHGLWESLIYDTEVKSNLLDYVTTTLLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLV
DDRDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FVENNVSRLSLVLKEISRKSEGLGGRVLRKLPFLAHALYIQSPSVTMTTFLQALSLAVDK
QFEEKKNLADCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgctgctggagaattgaagcaagcgctcccaaacgtgtgtgacagcgttcag
atccatgtggaagttcaccagaagtcgagcagcgttgccaagaaagaagatattaggata
agtgtcttaaagctgttgaacagacacaacatcgtgtttggtgactacaagtggacggag
ttcgacgacgctttccttaacaacaacgtgcagtctgtgtcaattgtggatacggagctg
aagctgaaggacagacagcctattgacctgagcataagcagtctttctcttcatattttt
catctgaatgaagaaggaccaacctctgaaaacctggaagaagagaatgaggatatcact
gcagctcaccactgggtgctaccagcagctgaattccacggcctttgggaaagtcttatc
tatgacactgaagtaaaatcaaatttactcgattatgtgacaacaacattattattttct
gacaaaaatgttgacagcaacctgatatcatggaacagagttgttctgctgcatggccct
cctggaactgggaaaacttctctctgtaaagcattggctcagaagctgacaattcgacta
tcatacaggtatcggtatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagatccaagatttagtt
gatgacagagatgctcttgtgtttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcaaggcaggcacagagccttcagatgctattcgtgtggtcaatgctgtg
ctgacacaaatagaccagattaaaaggtatccaaatgtagttatcctgactacttcaaat
attacggagaaaattgacatggcctttgtagacagggctgacataaaacaatacattgga
cctccatctactgcagcaatatttagaatatatctttcttgcctggaagaactgatgaag
tgtcaaataatatatcctcgacagcagcttctgacgctcagagagcttgagatgatcggc
tttgtagaaaataatgtgtcaaggttaagtcttgtactaaaagaaatctcaagaaaaagt
gaaggtcttggtggccgggtcctgagaaagcttcctttcctagcacatgcactttatatt
caatcccccagtgttacaatgacaacttttcttcaggccctttcacttgcagtagacaaa
caatttgaagaaaaaaagaaccttgcagactgcgtgtga
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