Ficedula albicollis (collared flycatcher): 101809119
Help
Entry
101809119 CDS
T02815
Symbol
DDX43
Name
(RefSeq) DEAD-box helicase 43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101809119 (DDX43)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101809119 (DDX43)
Spliceosome [BR:
fab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101809119 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
baeRF_family12
Motif
Other DBs
NCBI-GeneID:
101809119
NCBI-ProteinID:
XP_005044196
UniProt:
A0A803V052
LinkDB
All DBs
Position
3:complement(85460621..85483340)
Genome browser
AA seq
664 aa
AA seq
DB search
MSDWDASSDEELGASDWPRAAAAAEPLFWSPSTPSWGRASVEGGGRWGKGTGSPGGEEWE
PRGAEGSGGPRRAAQRRWPRAAAGEARDSAAPLCFHLDSALVGALIGRGGAKIKELENSS
GSRIKVTRGAYESEVKIFGSIDVQNKAKMLIDNLVSSSGQNHIRGGTEKGKTLDTIKPEN
NPKKPVINWASLRENRAKYESMKWAGLPPIEKNFYKESSRTASMSQEEVELWRKENNNIT
CDDLKEGEKRCIPNPVCKFEDVFEHYPDIMANIRKVGFQKPTPIQSQAWPIILQGIDLIG
IAQTGTGKTLAYLMPGFIHLTSQPISKDQRGGPGMLVLAPTRELALQVEAECSKYAYKGI
KSICVYGGGDRKGQIDKVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDM
GFEPQIMKILIDVRPDRQTVMTSATWPDGVRRLAKSYLKNPMIVYVGTLDLAAVNTVQQK
VIVIPEEEKRTFMHSFIKSMKPKDKVIIFVGKKLTADDLASDFGIQGIPVQSLHGNREQC
DREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRS
GEAVTLVTSNDWRFAAELIDILQRANQVVPDKLIAMAERYKQSQMRKEIEKDTQRPWRKP
SKSV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggacgcgagcagcgacgaggagctgggcgcgtccgactggccgcgggcc
gctgctgccgccgagccgctgttctggtcgcccagcaccccgtcatggggccgcgcctcc
gtggagggcggcgggcgatgggggaaaggcactgggagtcccggaggggaagagtgggag
ccgcgaggcgctgaaggctccggcggcccgaggcgggcggcgcagcggcggtggccccga
gctgcggccggcgaggctcgggactctgcggcgccgctctgcttccacctcgatagcgcc
ctggtcggggctctcataggtcgaggtggagctaaaattaaagaacttgagaattcttca
ggttccaggataaaggttacaagaggagcctatgaatctgaagtaaagatttttggcagc
attgatgtgcaaaacaaagccaagatgttgattgacaaccttgtttcaagttctggacaa
aaccatattagaggtgggacagagaaaggaaaaaccttggacactatcaagcctgaaaat
aatccaaagaaaccagtgattaactgggcctcccttcgagaaaacagggccaaatatgaa
tctatgaagtgggcaggcttgcctccaattgagaaaaacttctacaaagaatcatccagg
actgcgtccatgtcacaagaagaagtggaactgtggcggaaagaaaataataatataact
tgtgatgacttaaaagaaggtgaaaagcgctgcattcccaatcctgtttgtaaatttgaa
gatgtatttgagcattatcctgatattatggccaacataagaaaagttggttttcaaaag
cctacaccaattcagtcccaggcgtggccaattatactccaaggaattgatcttattggt
atagcacagactggtactgggaagacattagcatacttaatgcctggattcattcacttg
acttcacagccaatatctaaagatcagcgtggggggcctggaatgttagtccttgctccc
actagagaactggcacttcaagtagaggcagagtgttcaaagtatgcatacaaaggaatt
aaaagtatttgcgtctatggtggtggggatcgaaaaggacagatagacaaggttaccaaa
ggtgtggatattgttattgctactcctggcagactgaatgatcttcaaatgaacaacttc
ataaatttgaagagcataacgtatttggttttagatgaggctgacagaatgctggatatg
ggatttgaacctcagataatgaagatcttgatagatgtgcgtcctgacagacaaactgtt
atgacaagtgctacttggcctgatggtgtccgtcgcctagcaaaatcctacttgaaaaat
cccatgattgtgtatgttggcactcttgacttagcagcagtaaacacagtacaacaaaaa
gttattgttatccccgaggaggaaaagagaactttcatgcatagcttcattaagtctatg
aagccaaaagataaggtcatcatttttgtgggaaaaaagcttacagctgatgacttagca
agtgactttggtatccaaggaattccagtacagtctcttcatggcaacagggagcaatgt
gatcgagagcaggctttggatgacttcaagaaaggcaaggttcgaatattggtagctact
gacttggcatcccgtggccttgatgtgcacgacattactcatgtttttaactttgatttc
cctcgcaacattgaagaatatgttcacagagtaggtcgtactggaagagcagggcgctct
ggggaggcagtaacacttgtcacgagcaatgattggaggtttgcggctgagctgattgac
attctgcaaagagcaaaccaggtagttcctgacaagcttattgcaatggcagaaagatac
aaacagtcacaaatgagaaaagaaattgaaaaggatacacaaagaccttggagaaagccc
tcaaaatcagtgtaa
DBGET
integrated database retrieval system
