Ficedula albicollis (collared flycatcher): 101809143
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Entry
101809143 CDS
T02815
Symbol
TRAIP
Name
(RefSeq) TRAF interacting protein
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101809143 (TRAIP)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101809143 (TRAIP)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101809143 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-C3HC4_4
EXOC6_Sec15_N
RINGv
zf-RING_16
zf-RING_Vps41
T3SSipB
zf_RING_Vps8
zf-RING_4
RING_XB3-XBAT31
Zn_ribbon_8
Prok-RING_1
WEMBL
zf-RING-like
HMMR_N
Prok-RING_4
ATG17_like
GAS
zf-Nse
Cast
HIP1_clath_bdg
DUF1664
Flagellin_C
DUF5305
Laminin_II
OVT1
Motif
Other DBs
NCBI-GeneID:
101809143
NCBI-ProteinID:
XP_005052933
UniProt:
U3K2X1
LinkDB
All DBs
Position
12:complement(4044889..4066012)
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AA seq
464 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAVPCGHTFHQACLFQWFDTAPSRTCPQCRNQVSKRHIIN
KLFFDVTLEEQAAPDAESLQNELDKVKAQLSLKEKEKRECQTVVDTLRDTLDVRNATIES
LQKMLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEAHRLRNKLRSMERIELLLQSQRPEV
EEMIREMGVGQAAVEQLAIYCVSLKKEYENLKEARKISGEMTEKLKKELFSVNNKLQKTT
SELEKTKEELKSTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPAPVE
LQHPKLHRPANSDEINLDAAYDVSTPEHQPCAAPFGTAKRQKLDKKPPPVVNLAKKVLKE
TVENGADDLEDDALKGLLPAFIRNSVLSKKSSSGGLLGSHKNMGSVRTGYDGMGGRTKFI
EPTNLAEIRPLSVRSKKKVSRPASATFPAFSSSSSQARMDTFLL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgcacactgcaccatctgctccgacttcttcgacaatgaacgggacgtg
gcggccgtgccgtgcgggcacaccttccaccaggcctgcctcttccagtggtttgacact
gcaccaagccggacgtgcccacagtgcaggaaccaggtcagcaaaagacacatcatcaat
aagctgttttttgatgttaccctggaggagcaagcagcaccggatgctgagagcctgcag
aatgaactggacaaggtgaaggcccagctctccttgaaagagaaagaaaagcgggaatgc
cagactgttgtggacacgctgagggacactctggatgtgcgcaatgccacaatagagtca
ctccagaagatgctgggagagacagagatgctgtgctcttctctcaagaagcagatgaaa
ttcctggagcagcagcaggaggataacagaagttcaaaggaggaggcccaccggctgcga
aacaagctgagatccatggagcggatcgagctgttgcttcagagccagcgcccggaagtg
gaggagatgatcagagagatgggagtcgggcaggcagcagtggagcagcttgcaatctac
tgtgtctccctcaaaaaggaatatgagaacttgaaggaggctcggaagatctctggtgag
atgacagagaagctgaagaaggagctgttttctgtcaataataagctacagaaaaccact
tcagagctggagaagacaaaggaggagttaaaaagcacacagaaagatctgaagaatgca
gacaaggagatcttgagtttgaagaagaagatagacatcctgcaggatactctgaaggtc
ccatctgtaaccagggaaacactcagtcggctagtctttgaaagccctgctcctgtggaa
ctgcagcatccaaagctccaccgcccggccaacagcgatgagatcaatctggatgctgct
tacgatgtgagcacccctgaacaccagccctgtgcagctcccttcggcactgcaaaaagg
caaaagctggataaaaagccgcctcctgtggtaaatctggcgaagaaagttctgaaggaa
acagtggagaacggggcagatgatctggaggatgatgctcttaaagggctcttgccagca
ttcatcaggaactctgtcctctccaagaagtcatcctcaggtggtttgctgggttcccac
aagaacatgggctctgtgaggacaggctacgatggcatgggaggcaggacaaagttcata
gagccaacaaacctggcagaaatccgtccattatcagttaggagcaagaagaaggtctcc
agaccagcgtctgcaacttttcctgcattttcctccagcagcagccaggccagaatggac
actttcctgctgtga
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