Ficedula albicollis (collared flycatcher): 101809243
Help
Entry
101809243 CDS
T02815
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha 1
KO
K05637
laminin, alpha 1/2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04510
Focal adhesion
fab04512
ECM-receptor interaction
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101809243 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101809243 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101809243 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
101809243
NCBI-ProteinID:
XP_016151582
LinkDB
All DBs
Position
2:104969227..105050629
Genome browser
AA seq
3079 aa
AA seq
DB search
MPYHVADKHNFFQGLFPAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPLRNAQCR
VCDRHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTITLDLRQVFQVAYVIIKAA
NAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIGPPTYKRDDEVICTSYYS
RLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLRLQRIRTLNADLMTLSHNDPK
ELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQCQCEHNTCGESCNKCCPG
YHQKPWRPGTLSAGNKCEKCNCHNKAEDCYYNQSIADQKRSMDIHGQYLGGGVCLNCTQH
TTGINCEMCADGYFRPHKVSPYEDHPCYPCDCDPFGSLSSVCVKDEHHSDSQRGTWPGQC
QCREGYAGEKCDRCAFGYQGYPNCLRCNCSLVGSINEDPCTEPCLCKENVEGENCDLCKP
GFYNLQERNPQGCTECFCFGVSDVCDSLTWPVSQISDMTGWLVTDLYKARSVQPQRSQYD
GPHQISINNTEAVKVLKNTYYWSAPEAYLGNKLTAFSGELKYTVSYDIPMESVDSDIVSS
VDVIIQGNGQILSTRAAGLSLQPYEEYSNSVRFVSENFIEFNTKKAIDREMLMTVLANVT
HLLIRANYNIAKKAVYRLDSVTLDTANANVIDLSSAPDVEFCECPQGYTGISCESCLPGY
YRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGPFCDQCLPGFYGNPSQGTSED
CQPCACPLSSAANNFSPTCQLNEEGGIVCDKCLPGYTGSQCERCANGYYGNPLMPGQSCA
PCECNGNVNPQEEGHCDPFTGQCLKCLGNTAGHHCEKCADGYYGDAVTDKNCRACACHVN
GSLSSTCQHETGVCSCKSNVIGERCDKCLNGYYGLLTGLGCVPCNCSQFGSVSEECNHQG
QCHCVPGVAGEKCDRCAHGFYAFQDGGCTPCDCAHTQNNCNADSGQCICPPHTQGQKCEL
CEENYWGLSPKLGCKACNCSSTGSASLQCDVLTGQCQCKTEFGGRECSRCALGYRDYPDC
VACDCDLSGTRAETCNDTEGVCGCEEETGICACKENVFGLQCSECKPGTFGLSANNALGC
TPCFCFGMSTSCSELEDHVRIPITLTPDQAILHVVAQSNLTGTVEGVFSQFSDVLLDAAI
VRKFLNTETFYWKLPEQFQGDQLMAYGGKLRYTVAFYALDGFGTSNFEPQILMKGGHTSK
LVIYVDIPSPENGVRTEKEVEMKEDSWKYFNSVSDEPVLRSDFMSVLSNVEYILIKAAYG
QGLQQSRIANISMELAVKFEEMHVGRPLAHLVEQCRCPAGYTGLSCQSCAPGYYRRKHTE
LSVREPHTLIAPCVPCQCNNHSETCDPDTGKCLNCRDNTVGDYCSACAPGYYGRVTGSAN
DCSLCACPRANSVSFSPTCVLKGVQDYLCDACLPGYEGQYCERCSPGYYGAPQLPGGSCR
PCQCNPGGSVDGNCDGATGQCLCKPGVTGQLCEECEPRHLLLEDECVSCDDNCTGVLLNS
LDNLQEAMLSVNLTGIDRVPYGILSELENATQHLKRSVVPREDTTYSLDTAEENLLNLSG
GIDYLHEETTRFLKQAQQLDTMTQKTRNKSQELTGFIDTVHTTIKVLAEVALSLNETLGL
DLPLSNAASQRLQDDISALLDALRKKDFVRQHHNATTVLKAAEKLLTQVQKEYFKPQQEL
AELKTDASQFLSKQNGRLQDVQDLVNEALADISETHRLFPLITSNLAELNDKKLKIKEGE
EVSTMLIKEGKVLLNAAAALAQDVKNSTFNAEVHQDGLVLWSTKLRHHVDELVMQMSVRG
VLDLVYRAEEHATQFQRLADALESDLSRVRNLTLNATAAIDTHSSVKSVIERTESLADDA
SRVMNGPLDLPDESFSLLGKETLLLSSKFQNEAKNLKKKNDGLLFGLNELKKKVEKTQES
TNKIGNQLNDSLLTLRALPNNTRKYMLEVKELALSANTSAVVDLSHFGEFSQKLMNTSAT
LSQVNDSLRKTSELITDSSKAASTAEKQVKEVEAQASLLLDRLKPLKMLEENLNRNLSEI
KELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLNVKTAEPDNLLFYLGSNG
KTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDNNKWHRIHATRFGKTGTLSIEEMNS
NQKPSPKSGTSPGTASILDVNKSTLMFIGGLGGQIKKSPAVKVTHFKGCLGEASLNGKSV
GLWNYVEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVTQIIIFFSTFSPNGLL
LYLASNGTRDFLSLELVDGKVRATVDLGSGPLALTTENRYNNGTWYKISFNRNKKQGILA
VMDAYNLNYKETKQGESPGVASDLNRSDKDPVFIGGLPRSRALRKGLNSRMYVGCIKNLE
ISRSTFDLLRNSYGVRKGCVLEPIHSVSIMNNGYIELVPKSLSPESELMATFATKNSSGI
ILAGLSRGLEKRRRRQAHLPFFSIMLIDGHLAVHVNAGDRASSRKVVLQSANGTYSDGQE
HSVILIRNKRIITVQVDESKPAELRLGSAAENSPINISNFYAGGIPAGEGILGLKLAGSF
HGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPKPSDIVIQPELQALPVPLRPLTDT
KKVVCAKDELPDHVQGAHQFGLAKGSHLTLLFNQSAVRKKLSIQLTLRTFASSGLIYYMA
HQNQVDYAALQLYGGQLHFSFDLGKGKAVALHHAVVSDGKWHTVKTEYVKRKGTIIVDGQ
ELVEVSALGDGSTLDVEGKLYVGGLPLDYIPKNLGNVTHSIPACIGSMTINGKQLDNESP
VSIFAVNKCYETVQEGTFFDGSGFAALVREGYKVRSDVNITLEFRTTAVHGVLLGVSSAK
VDAIGLEIVHGKVLFHVNNGAGRITVTYEPRGTNSLCDGKWHKLQANKSKHRISLIIDGN
LVHTDNPYVQSTSADTNNPIYVGGYPADVKQNCLTSKSSFRGCLRNLVLTKGQHTELFDF
SRAFDLRGVFPHSCPGAEH
NT seq
9240 nt
NT seq
+upstream
nt +downstream
nt
atgccttaccacgtggctgataaacataatttctttcaaggcctgtttcctgccattttg
aacctggccagcaatgctcacatctccaccaatgccacctgtggggagaagggaccggag
atgttctgcaagctggtggagcacgttcctggacggcccctgcgcaacgcccagtgccgc
gtctgtgaccgccacagtgccaatcccaaagagcagcacccaatttccagtgcaatcgat
ggtaccaataactggtggcagagtcccagcattcagaatggaaggcaataccactgggtc
accatcaccttggatttaaggcaggtctttcaagttgcatatgtcatcatcaaagctgct
aatgctccacgacctggaaactggattttggaacgctccatagatggcactgagttcaga
ccgtggcagtactatgcaattagtgataccgaatgtttaactcgttacaatattacacca
agaattgggccgccaacttacaagagagatgatgaagtgatctgcacctcctattattcc
agactagttcccctggaacatggagagattcacacatcactgatcaatggtaggcctagt
gctgatgatccctcacagaagctgttggaatttacctctgcacgatacattcgcctgcga
ctgcagcgtattagaactctgaatgctgacctcatgactctcagccataatgatcctaag
gaactagaccccattgttaccagaaggtactactattcaataaaggacatctctgttggt
ggcatgtgtatttgttatggccatgctcgaagctgccctttggatgaaatcacaaagaaa
ttgcagtgccaatgtgaacacaacacatgtggagagagctgtaacaagtgctgtccaggc
taccaccagaaaccatggagaccaggaaccctttctgctgggaacaaatgtgagaaatgt
aactgtcataacaaagcagaagattgttattacaaccagagtattgcagatcagaaaagg
agcatggatattcacggccagtatctaggaggtggtgtgtgtttaaactgtactcaacat
actactgggatcaactgtgaaatgtgtgctgatggatattttagaccacacaaagtttct
ccctatgaggatcacccctgctatccctgcgactgcgacccgttcggctctctgagctct
gtctgtgttaaagatgagcaccattctgactctcagcgtgggacttggccaggccagtgt
cagtgcagggaaggttatgcaggggaaaaatgtgatcgttgtgcatttgggtatcagggc
tacccaaactgcctgcgttgtaactgcagcctggttggcagcatcaatgaagacccatgc
acggagccttgtctttgcaaagaaaatgtagaaggtgaaaactgtgatctctgtaaacca
ggattctacaatttgcaagaaagaaatcctcagggctgcacagagtgtttttgctttggc
gtttctgatgtctgtgacagtcttacatggcctgtcagtcagatttcagacatgactggg
tggctcgttaccgatctgtacaaagcaaggagcgtgcagcctcagcgaagccaatatgat
gggccccatcaaataagtattaacaacactgaggctgtgaaagtactgaaaaatacttat
tactggtcagcacctgaggcatacctaggaaataaactcacagcttttagtggagagttg
aagtatacggtatcttatgacattccaatggagagtgtggacagtgatatagtgtctagt
gtggacgtcatcattcagggtaatggacagatcctgagtacaagagcagcgggcttgtca
ttacagccatatgaggagtattctaattcagtgagatttgtatcagagaatttcatagag
ttcaatacaaaaaaggcaatagaccgggaaatgttgatgactgttctggcaaacgtgacc
catcttctgatcagggccaactacaacattgccaaaaaggctgtgtacaggctggactct
gtgaccctggatactgcaaatgcaaatgttatagatctttcttcagcaccggatgtggaa
ttctgtgaatgtcctcagggttacacaggaatatcctgtgagtcctgtctccctgggtac
taccgtgtggatggaatactctttggaggtatttgtcaaccctgcaagtgcaatgggcat
gcaactgagtgtgacatccacggtgtttgctttgcttgtcaacacaacacgacaggacct
ttctgtgatcagtgcttgcctggcttctatggaaatccatcccaaggaacatctgaggac
tgccagccttgtgcatgtcctctgagttctgctgcaaacaatttcagtcccacttgccag
ctgaatgaagaaggtggaattgtctgtgacaaatgtcttccaggctatactggttctcaa
tgtgaaaggtgtgccaatggttactatgggaatcctcttatgcctggacagtcgtgtgct
ccttgtgaatgcaatggcaatgtaaaccctcaagaagagggccactgtgatcccttcaca
ggacagtgcctgaagtgtctggggaacacagcaggtcaccactgtgaaaagtgtgctgat
gggtattatggggatgcagtgactgacaaaaactgccgtgcctgtgcctgccacgtgaat
ggttccctttcaagtacttgtcagcatgagacaggtgtctgttcctgcaaatcaaatgta
attggagaaagatgtgataaatgcttgaacggttattatgggctgcttactgggcttggc
tgcgttccctgcaactgcagtcagtttggctcggtgtctgaggagtgcaatcatcagggg
cagtgtcactgtgtgccaggagtggctggagagaagtgtgatcgttgtgctcatggcttt
tacgcattccaggatggtggctgcacaccctgtgactgtgcccatactcagaacaactgc
aatgctgattctggccaatgcatttgtccccctcacactcagggacaaaagtgtgaactc
tgtgaagaaaattactggggactctctcctaaacttggttgcaaggcttgcaactgcagc
agcactggttcagccagtctccagtgcgatgtgttgacaggtcaatgccagtgcaaaact
gaatttggaggacgagaatgttccaggtgtgccttaggctacagggactacccagactgt
gttgcctgtgactgtgatttgagtggaaccagagcagagacgtgcaatgacactgaagga
gtttgtggttgtgaagaagaaactggcatctgtgcctgcaaggaaaatgtttttggtcta
caatgcagtgagtgtaaacctggaacttttggtctgtctgctaacaatgcactaggatgt
actccatgcttctgtttcgggatgtccacatcttgttcagagctagaagaccatgtgaga
attcctataacattaactccagatcaggctattctgcatgtagtagctcaaagtaacctg
actggaacagtggaaggagtattttcacaattttctgatgttttattggatgctgccata
gtcaggaagttcttaaatacagaaacattttactggaagttgccagagcagtttcaggga
gaccagctcatggcctatggagggaagctgagatacactgttgccttttatgctttggat
ggctttggaacctcaaattttgagccacagattctaatgaaaggaggtcacactagcaag
ttggtcatctatgtagatatcccttctccagaaaatggagtaagaactgaaaaggaagta
gaaatgaaggaggattcttggaagtattttaactctgtgtctgatgagcctgtcttacgt
tctgacttcatgtctgtgctcagcaatgttgaatacatccttatcaaggcagcttatggc
caaggattgcagcaaagcagaattgcaaatatctcaatggaacttgcagtcaagtttgaa
gaaatgcatgtaggcagacctctagctcatcttgtagagcaatgtaggtgtcctgctggt
tacactggattgtcctgccagagctgtgctccaggatactacaggagaaagcatacggag
ctcagtgtaagagagcctcacactctgatagcaccttgtgtgccatgtcagtgcaacaac
cacagtgaaacctgtgatcctgacactggaaagtgcttgaactgcagagataacacagtt
ggtgattactgcagtgcttgtgccccaggctactacgggagagtaactggatctgccaat
gactgctctctttgtgcctgtcccagagccaactctgtcagttttagtcccacttgtgtc
ctgaaaggtgttcaggattacctctgtgatgcttgtctcccaggatatgaaggacagtac
tgtgaaaggtgctcccctggctattacggtgccccccagctccctggtggcagctgccgt
ccgtgccagtgcaatccaggtggttctgttgatgggaattgtgatggtgccactgggcag
tgcctctgtaagccaggggtaacaggacagctctgtgaggagtgtgagccaaggcatctt
ctgctggaggacgagtgtgtgtcttgtgatgacaactgcacaggagttttgttaaacagt
ttggataatctccaggaggccatgctttcagtgaacctcactggtattgaccgtgtgccc
tatgggatattgtcagagttggagaatgcaacacaacatttgaagaggtctgtagttcct
agagaagatacaacttactcgttagatacagcagaagaaaatcttctgaatttatcagga
ggcattgattacttgcatgaagagacaactagatttttgaaacaagctcagcagcttgac
acaatgactcagaaaaccaggaataaaagtcaagaactgactggctttattgacacggta
catacaaccatcaaagtacttgctgaggttgctttgtcactaaatgaaacactgggcctg
gatctgccattgtcaaatgctgcgtctcagagactgcaggatgatatttctgcccttttg
gatgcactgcgcaagaaggattttgttcgacagcaccataatgctaccacagtcctaaaa
gctgccgaaaagttgttgacccaggttcagaaagagtatttcaaaccccagcaggaactt
gctgagctaaaaacagatgcaagccaattcttatcaaagcagaacggcagactgcaggat
gtccaggacctggtgaacgaggcgctcgctgacatcagtgagacccatcgcttgtttcct
ctcatcaccagcaacctggcagagttaaatgacaaaaagctaaaaataaaggaaggtgaa
gaagtctcaaccatgctcattaaagaagggaaggtgctactgaatgctgctgctgctctt
gcccaagatgtaaagaactctacatttaatgcagaagtccaccaggatgggttggtcctg
tggagcaccaaactgcgacatcacgtggatgagctggtgatgcagatgtctgtgagagga
gtgcttgacttggtgtacagagctgaggaacatgccacccagttccaaagacttgcagat
gcactagagagtgacctttctagggtaagaaacctgactctgaatgcaactgctgctatc
gacactcactccagcgttaaaagcgtgattgaaagaacagagagtttggcagatgatgca
tctagagttatgaatggccccttggatttaccagatgagtctttcagccttctgggaaaa
gaaactctactgcttagctccaaatttcagaatgaagctaaaaatctgaagaaaaaaaat
gatgggcttctatttggactgaatgagttgaaaaaaaaggtagaaaagactcaggaaagt
actaataaaattggcaaccaacttaatgattctctgttgacactcagagcattgcctaac
aataccaggaaatacatgcttgaagtgaaagagctggctctgtctgcaaacaccagtgct
gtggtggatttaagtcactttggggagttcagtcaaaagctgatgaatacatctgctaca
ttgtcccaagttaatgactctttgaggaaaacaagtgaactcataactgattcatcaaaa
gctgcatccacagctgaaaaacaagttaaagaagttgaagcacaagcaagtcttttattg
gacagactcaaacctttgaaaatgctagaggagaacctgaacagaaacctgtctgaaatt
aaagaacttatcagccaggcccgcaagcaggcagcatctattaaagttgcagtatcagca
gacagagattgcattcgtgcctatcaaccccagatttcatctacaaattacaacacctta
acactcaatgtgaaaactgctgaaccagataacctccttttctacttgggtagcaatgga
aagacagacttcctggcagtggagatgcgacgtggtaaggtagctcttctttgggatttg
ggctctggatcaacaagagtggaataccctgattttcaaattgacaacaacaaatggcac
agaatacatgccaccaggtttggaaaaacaggtacactcagcatagaggaaatgaattcc
aatcagaagccttcacctaaatctggaacctctccggggacagccagcatattggatgtt
aacaagtcaaccctaatgtttattggaggacttggagggcaaatcaagaaatcacctgct
gttaaggtgacccattttaaagggtgcctaggagaggcatccctgaatggcaaatctgtt
ggtctttggaactacgtagaaagagagggcaagtgcaatggctgttttggaagcccacag
gatgaggacacttcattccattttgatggcagtggatactcagtggtggagaaggcactc
cgctcaacagtgacccagataataatatttttcagtaccttttcaccaaatgggcttctt
ctgtatcttgcttcaaatggcacaagagacttcttgtccctggagcttgttgatggcaaa
gtgagggcgactgttgatcttggttcaggaccccttgctcttacaacagaaaatcgttac
aacaatgggacgtggtacaaaatctcattcaatcggaataagaagcaaggaattttggca
gtcatggatgcatacaaccttaattataaagaaaccaagcaaggagaatctcctggggtt
gcctcggacctgaaccgctctgataaggacccagtcttcattggtgggctgccaagatca
agggctctgaggaaaggtcttaatagtagaatgtatgtgggatgcatcaagaatcttgaa
atatctcgttccacctttgacttgcttagaaattcatatggagtaagaaaaggctgtgta
ttggagcctattcacagtgtgagcatcatgaacaatggatatattgagttggtacctaag
tccttaagcccagagtcagaattgatggcaacttttgctacaaagaacagcagtggcatc
atccttgctggactcagcaggggactggaaaagcgacgacgaagacaagcacatttgccc
ttcttttccatcatgctgattgatggtcatctggcagtgcatgttaatgctggagacaga
gcaagtagtaggaaagtagttctccagtctgctaatggaacatacagtgatgggcaagaa
cactctgtcatcctaattcggaataagaggatcataactgtacaggtggatgaaagtaaa
cctgcagaattgaggcttggttcagcagcagaaaatagcccaattaatatctccaacttc
tacgctggtggcattccagcaggagagggcatcttaggactaaaattggctggctccttt
catggctgtatcagcaaccttatttttaacaaggagcttttatatttcaccacttccatg
aagtatgaacatgtggatatggacagctgctttctgtcagagaagcctaaaccatcagac
attgtgattcaacctgaacttcaggctctaccagttcccctgagacctctcacagataca
aaaaaagtagtttgtgcaaaagatgagctgcctgatcatgttcaaggtgcccatcagttt
ggacttgccaaaggcagccacttgaccctgctcttcaatcagtctgctgtcaggaagaaa
ctttccatccagctgactctcagaacctttgcctccagtggcctgatttactacatggct
caccaaaaccaggttgactatgcagccctacagctttatgggggacagctccatttctca
tttgatttaggcaaaggaaaagcagtagctcttcaccatgctgttgtcagtgatggaaaa
tggcatacggttaagacggaatacgttaaaagaaaaggcacaatcattgtggatggacag
gaattggtagaagtcagtgctctgggagatggtagcaccctggatgtggaagggaagctc
tatgttggaggactccccttagactacataccaaagaatcttgggaatgttactcacagt
attcccgcctgcattggtagcatgacaattaatggcaaacaactggacaacgagagtcct
gtctctatctttgctgtgaataaatgctatgaaacagtgcaggaaggtactttctttgat
ggaagtggctttgctgctcttgtcagagaaggctacaaagtgcggtctgatgtgaacatc
accctggagttccgtacaacagcagtgcacggggttcttcttggggtcagcagtgccaag
gttgatgccattggactggaaattgtacatggcaaggttttattccatgtcaacaatgga
gctggcagaataacggttacatacgaaccaagaggcacaaacagcttgtgtgatgggaaa
tggcacaagcttcaagcaaacaaaagcaaacatcgcatttcgctgataattgatgggaat
ttggttcacactgataatccctacgtccagtcaacatctgcagatacaaacaatcccatt
tatgttggaggttatcctgctgatgtcaagcaaaactgcctcacaagcaagagctcattc
cgtggctgtttgaggaaccttgttttgaccaagggccaacatacggaattgtttgacttc
agcagagcttttgacctgcgtggagtgtttcctcattcctgccctggggctgagcactga
DBGET
integrated database retrieval system
