Ficedula albicollis (collared flycatcher): 101809343
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Entry
101809343 CDS
T02815
Symbol
TP53BP1
Name
(RefSeq) tumor protein p53 binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101809343 (TP53BP1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
BRCT
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
101809343
NCBI-ProteinID:
XP_016156425
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All DBs
Position
10:21246399..21271052
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AA seq
1889 aa
AA seq
DB search
MERGGSSQLDPGFSQQSTPLLIVEDSQSPGAEADVERARLGVPTRRSPSPVLDIICGPAG
SRAPRERLAGKGGARGHGGSGXRGRADGAVLAEPMESAARPSASGPQGCAAEESPPPDGE
SSALGKAGQRSEGDAEDCASSPSVEDAGMSQLQFGVLELSQSQDFESDFVPNEGNARHQL
HSGPAVLSSRLVKNESKYETDSSTEAHTTLESQAEKSERTLQEAEEHTRKRTPVSDTSKP
EESLDSGHEESDILSTQEEMFPENHATAAAGSGCPITRMEEGSSLACTPARSLQVLQLSG
QAFLVQEGHSIVSSGLVIPPSVSCGPSALVPSSPTEQKQVEDEQMDISISAEERELMQKR
RGDMLEMALPCIPPRPLVQPQASTPVSQSTPTFFPGSLPIPSQPEFSHDIFVPTQSPERK
HEGEEKTAALTPLCLPGDLSGSTDALSKMSVDDSVSQPPESCKLMLSASACSQPTNTDVS
SGSLNTGPDSETMQVERISECKASDSRLCSVENDKVKLKVNAGDQAPCENCEQAKKENAE
TAGMPVGQFVSAGVAGDEPFVHQEIECISGSQAAANHSGLPETLSYAQETSKPEEVPETQ
CEEQEEKLQVKEKQIKEDRSLVNITFSHRFILEGEGQCYEDTAVNDSCKNSNNVAPELEK
IGLECQGKESLKGFTSVAGEAKNMDKLSFKAVAENMAKLNEGLAKPSVGELLEQHILLPK
LKGDVQSEVALCAKNHPDCSELGQVMIISNQPSLQERGVETRVAQEEDQVPKNMEHTVTT
RSLEQQEQMQPQKATSESPSPSSGTPFHFTLPKEGDVIQSLTSITPPLPGHLKMGPRRHS
TPIVDDTCPDSTIVTSDVTAEGTMGTNNDTVESAVVPADVSEMCGKGESGVVLESDAKLS
LRMNPATPVNDGSEESLPFSLEKPAASDRKDGSATEAAASSQKASSVFSRVCEVRREDEA
RGHGLSTSTFRGDLFIFPGTQEDAELHTNPSGWQYQQQNADGSSGQILTPPRMQQDCHQQ
SSDAGDGESVETDVVSTQAEEGRIMQRKQRKAENIKNKGIQTTADNLFTPTTVTTATQTS
EEICRQVEMGTSMSGQRPGQQDVNIQTDESGEKLVNTSGDDTDSLRSQGEEEFNLLHPPK
GGVQRRHLRTIREVRTVVTRVITDVYYINGAEVERKVVAETEEPVVECQECETDVSSSRT
AGGSSLTSGDLGDVSSFSSKASSLHRTSSGGSSGHSATHSSSSSSGRGTGPVKGKVCGTE
TGEFALPIGRGILGKLSPRKGAGQPASPLRVSQTGALPCEEEEDSMPGTRQAGRAPVTPR
GRGRRGRPPSRTTGTRDLAGLPGVEDLSTTASPEEKSFARSVCLPEGGEKSDTSGFCALR
RSDSPEIPLQVVTGPSGCADSSTGSSFVGLRVVAKWSSNGYFYSGTITRDVGAGKYKLLF
DDGYECDVLGKDILLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGELYYCIEKEGQRK
WYRRISVILSQEQGNKLREQFGLGPYEPVTPLTKAADISLDNLVEGKRKRRSNLGSPSTS
SSSTTPTRKGQESPRAPPASLSGKRKLLASEEERSPAKRGRKSAMTKPGAVRGGEFASTC
EGVDAADPPVLEGDHGPLPHNKTLFLGYAFLLTMATPSDKLVNHQKPSDGPTGSSEEEED
FLERTPYDKHYIAQQLRAGAGYILEDFNETQCNAAYKCLLIADQHCRTRKYLLCLARGIP
CVSHIWVHDSCHANQLQNYRNYLLPAGYSLQEQKLLEWHPRENPFHNLKVLLVSDQQENF
LDLWSEILMTGGAASVKQHYSNAHNKDIALGVYDVVVTDFSCPAGVLKCAEALRLPVVSQ
EWVIQSLIAGERVGYKQHPKYKHDYSLTE
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcggcgggagcagccagctggaccccggcttctcgcagcagagcactcccctg
ctcatcgtggaggactcgcagtcgccgggcgcggaggcggacgtggagcgggctaggctc
ggcgtgccgacccgccggagcccgagccccgtgctggacatcatctgcggtcctgccggc
agccgggcaccgcgggagcgactcgcaggtaagggcggggcgcggggtcacggcggctcc
ggcnaccgcggccgcgctgacggcgctgtgcttgcagagcccatggagagcgcggcccgc
ccgagcgcctccggaccgcagggctgcgcagcggaggagtctccgccgcccgacggggag
agcagcgcccttgggaaggccgggcagcgaagcgaaggggatgctgaggactgtgcttct
tcgccgtccgtagaagatgcaggcatgtcacagctgcagtttggagttctagagctgtcg
cagagccaggactttgagagtgactttgtgcccaatgagggaaatgcgaggcatcagctt
cactctggacctgctgtcctttcttccagacttgtgaagaatgaatctaaatatgaaact
gactccagcacagaagcacatactactttggaaagccaggcagagaagtctgaaagaact
ctgcaggaagcagaagagcataccagaaagagaacacctgtcagtgataccagtaaacct
gaagaatcccttgattctggtcatgaggagtcagatatcttgtcaactcaggaagagatg
tttcctgaaaatcatgcaacagccgctgcagggagtggctgtccgataaccaggatggaa
gagggaagttctctggcgtgcacccctgcccgcagtctgcaagtcctgcagctctctgga
caggcattccttgtacaggagggtcattccattgtctcttcaggcctagttattcctcct
tctgtttcctgtggacccagtgcccttgtccccagcagtcctactgaacagaagcaagta
gaagatgaacagatggatatatctatctctgcagaagaaagagagctgatgcaaaagcgg
agaggagatatgctggagatggccctcccttgtatccctccaagacctcttgttcagcca
caggcttcaactccagtgtcccagagtacccccaccttctttcctggatctttacctata
ccatcacagccagagttttctcatgatatctttgttccaactcagagtccagagaggaag
catgaaggagaagaaaaaactgctgctttaacccctttatgcttaccaggagatctctcc
ggatccacagatgctttgtcaaagatgtctgtggatgactctgtgtcacagcctcctgag
tcctgtaaactgatgctttctgcaagtgcgtgtagccagcccacaaatacagacgtcagt
tcaggctctctgaacacaggcccagacagtgagaccatgcaggtagagaggatttctgaa
tgcaaggcctcagactcaagactctgttctgtggagaatgataaagtaaaactgaaagtg
aatgcaggtgatcaagcaccatgtgaaaactgtgaacaagcaaagaaggagaatgcagag
actgcaggaatgcctgtaggacagtttgttagtgcaggtgttgcaggagatgagccgttt
gttcatcaagagatcgagtgtatttctggaagtcaggctgctgcaaatcactctggtctg
cctgaaactttgtcatatgctcaagagacttccaaacctgaggaagttcctgagactcag
tgtgaagaacaagaagaaaaactgcaagtaaaagagaagcaaataaaggaagataggtct
cttgttaatataacattttctcataggtttattcttgaaggggaaggacagtgttatgaa
gatacagcagtgaatgattcttgtaaaaatagcaataatgtagccccggaattagaaaag
attggactagaatgtcaaggaaaagaatctttgaaaggttttacttctgttgctggggag
gcaaagaacatggataaactgtcttttaaggctgttgcagaaaacatggcaaagctcaat
gaaggtttagctaagccttctgtaggggagttactggagcagcacattttgcttccaaag
ttaaagggtgatgtccaatcagaagtggcattgtgtgccaaaaaccatcccgattgttca
gaattgggacaggtaatgataataagcaatcagccatcccttcaagagagaggggttgaa
acacgagtagctcaggaggaggatcaggtgccaaagaatatggagcatacagttacaaca
aggagtctggagcaacaagagcaaatgcagccacagaaggcaacttctgaatcccccagt
ccgtccagtggaaccccatttcattttactttgccgaaggagggtgatgtcattcagtcc
ttaactagcataacaccacctcttcctggccatctcaaaatgggacccaggagacacagc
acaccaattgtggatgatacttgcccagacagcactatagtaaccagtgatgttacagca
gagggcacaatggggaccaacaatgacactgtggaaagtgcagtggtaccagcagatgtg
tcagaaatgtgtgggaaaggagagtctggtgtggttcttgagtcggatgcaaaactttct
ctgcgaatgaaccctgctacgcctgtgaatgacgggagtgaggagtccttgccattcagc
ttggaaaagcctgcagccagtgacaggaaagatggatctgctactgaggctgctgccagc
tcccagaaagcatcatctgtgtttagtcgtgtctgtgaagttcgtcgagaggatgaggcc
aggggtcatggtctttccacttctacatttaggggggatctgttcatttttcctggcaca
caagaagatgctgaattacatacaaatcccagtggttggcagtaccagcaacagaatgca
gatggcagtagtggacagatcctaactcctccgaggatgcagcaggactgccatcaacaa
tcttcggatgcaggggatggagagtctgtggagactgatgttgtaagcactcaggcagaa
gagggaagaataatgcagagaaaacaaagaaaggctgagaacatcaagaataaagggatc
caaactacagcagacaatctttttaccccaacaactgttacaacagcaacacaaacatca
gaagaaatctgtagacaggtggaaatgggaaccagtatgtctgggcaaagacctgggcag
caagatgtgaacattcaaactgatgagagtggggaaaagcttgtcaacacctctggagat
gacacggactctttgcgcagtcagggagaggaagaatttaaccttcttcaccccccgaag
ggcggagtccagcgccgccacctgcgaaccattcgggaggtgcgcactgtcgtgacgcgg
gtcataaccgacgtttactacatcaacggcgccgaggtggaacgaaaggtggttgcggaa
actgaggagcctgtagtggagtgccaggagtgtgagactgacgtgtcctcctctagaact
gcagggggctcgtccctgacctcgggggaccttggtgatgtcagctccttctcatctaag
gcctcaagtctgcaccgtacatccagtggaggaagcagtggtcattctgccacgcacagc
agcagcagcagctcagggcgaggaactggacctgtcaaagggaaagtgtgtgggacagaa
accggagaatttgctttgcccattggcagaggcatcttaggaaaactgagccctaggaaa
ggagctgggcagcctgcatcacccctcagagttagccagacaggagcactgccttgtgag
gaagaggaggactctatgcctggcactcgtcaggctggcagagcacctgtgacacctcgt
ggacgaggaagaagaggacgcccaccatctcgaacaacaggaacaagagatttagccgga
ctgccaggtgtggaggatctctcaactacagcatcacctgaggagaaatcatttgctcgt
tcagtttgcctgccagagggaggagagaaatctgacacttctggcttctgtgccttgcgt
cgaagtgactctccagaaatcccattacaagtggtgactggtccttcgggctgtgcagac
tcatccactgggagcagctttgtgggcctcagggttgtagccaagtggtcctcaaatggg
tacttttattctgggacgattacccgagatgttggagctggaaagtacaagctgctcttt
gatgatggatatgagtgtgatgtgctgggaaaagatattttgctctgtgatcctatccca
ctggagacagaggtgactgcactctctgaggatgagtacttcagtgcaggtgtggtgaag
ggacaccggaaggagtctggagagctgtactactgcattgaaaaggaaggccagaggaag
tggtacagacgaatatctgttatcctgtctcaggaacaaggaaataagctccgggagcag
tttgggctaggtccttatgaacctgtcactcccctgaccaaagcagctgacatcagtctt
gataatctggtggaggggaagaggaagcgacgtagtaaccttggttctcccagcacttcc
agcagcagcacaactcccacccgtaaagggcaggagagtccacgtgccccaccagcctca
ctgtctgggaaaaggaaacttcttgcttctgaagaggaacgatccccagctaaacgtggc
cgcaagtcagcaatgacaaagcctggggctgtgagaggtggagagtttgcaagcacctgt
gaaggtgtagatgctgcagatcccccagtactggagggcgaccatggacccttgccccac
aataagaccctctttttgggctatgcctttcttcttaccatggcaacaccaagtgacaaa
ttggtcaatcaccagaagccatcagatggtcctactgggagtagcgaggaggaagaagat
tttttagagaggactccgtacgataaacattacatagcacaacagctgcgagcaggagct
ggctatatcctggaagacttcaatgagacccagtgtaatgcagcatacaagtgtctttta
attgcggaccagcattgtcgaactcggaaatacttgctgtgccttgccagagggatccct
tgtgtgtctcatatctgggtccatgacagctgtcatgctaaccagcttcaaaattatcgg
aattaccttttgccagctggatatagcctccaggagcaaaaattgctagaatggcaccca
cgagaaaacccgttccataacttgaaggttcttctggtgtcagaccagcaagagaacttc
ctggatctgtggtctgaaatcctcatgacagggggagcagcatctgttaaacagcattac
tcaaatgctcacaacaaagatattgctttgggtgtttatgatgtggtggtgactgacttt
tcctgcccagctggtgtcttgaagtgtgcagaagctttacggctgcctgttgtctcgcaa
gagtgggtgatccagagccttattgctggggagagagtgggctacaagcagcatccaaaa
tataaacatgactattccctcactgaatga
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integrated database retrieval system
