Ficedula albicollis (collared flycatcher): 101809387
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Entry
101809387 CDS
T02815
Symbol
TRIM71
Name
(RefSeq) tripartite motif containing 71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101809387 (TRIM71)
04121 Ubiquitin system [BR:
fab04121
]
101809387 (TRIM71)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101809387 (TRIM71)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101809387 (TRIM71)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101809387 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
TEN_NHL
SGL
Vgb_lyase
DUF4094
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
101809387
NCBI-ProteinID:
XP_005040929
LinkDB
All DBs
Position
2:complement(43120104..43133804)
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AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQQVL
EEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSD
QQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVLVKSGRSYIGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACD
VSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNH
RVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagatgccctacaggactccagg
actctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactgagt
attgaacaggcccaggctgtggcagagcaagtggagatgaaagcaaaggtggtacagtct
gaagtcaaagtagtgaccactagacacaagaaagccttggaagagcgggagtgtgagctg
ctctggaaggtggaaaagattcgccaagtcaaggccaagtccctctacttgcaagttgag
aagttacgtcagaacctgaacaagctggataacaccattagtgctgttcagcaggtcctg
gaggagggccgcaccatggatatccttctggctcgggaccgcatgctggctcaggtgcag
gagctgaagaacgtcagaggccttctgcagccccaggaagacgacaggatcatgttcacc
ccccccgaccaggcattgtacatggccattaaatcaatgggctttgtcagcagcggggcc
tttgctcccttgaccaaagccacgggggaaggcctcaagcgcgcgctgcagggcaaggtg
gcctccttcaccgtgatcggctacgaccacgacggggagccccgcctgtctgggggcgac
atgatctcggcagtggtcatgggccccgatggaaacctgttcggggcagacgtcagcgac
cagcagaacggcacctacctggtcagctaccgtccccagctggagggagagcacctggtg
tccgtgatgatgtgcaaccagcacatcgagaacagccccttcaaggtgctggtgaagtcg
gggcgcagctacatcggcatcgggctgccggggctgtccttcggcagcgagggcgacagc
gacggcaagctgtgccggccctggggcgtcagcgtcgacaaagagggattcatcatcgtc
gccgaccgcagcaacaaccgcatccaggtgttcaagccgtgcggcaccttccatcacaag
ttcggcacactgggctcccggccaggccagttcgatcgccccgccggcgtggcctgcgac
gtctcgcgtaggatcgtcgtggccgacaaggacaatcatcgcatccagatcttcacgttc
gaggggcagttcatcctgaagtttggggagaaaggaaccaagaacgggcagttcaattac
ccctgggatgtggctgtcaacgcagagggcaagatcctggtctctgacacgaggaaccat
cgcgtgcagctgttcgggcccgacggcgtgttcctcaacaagtacggcttcgaaggggcg
ctctggaagcactttgattcccccagaggcgtgacgttcaatcacgagggccacctggta
gtgacggacttcaacaaccatcgcctcctggtcatccaccccgactgccagtcggcgcgc
ttcctgggctccgagggcaccggcaacgggcagttcctgcgcccgcagggggtggcggtg
gatcaggaggggcgcatcatcgtggccgactccaggaaccaccgcgtgcagatattcgag
tccaacggtagctttttatgcaagttcggcactcagggaagcggcttcggtcagatggac
cgtccttcaggtattgctgtcacccctgatggcatgattgtcgtggtcgacttcggaaac
aatcgaattctcgtcttctaa
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integrated database retrieval system
