Ficedula albicollis (collared flycatcher): 101809407
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Entry
101809407 CDS
T02815
Symbol
RXRG
Name
(RefSeq) retinoid X receptor gamma
KO
K08526
retinoid X receptor gamma
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03320
PPAR signaling pathway
fab04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101809407 (RXRG)
03320 PPAR signaling pathway
101809407 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101809407 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
fab03310
]
101809407 (RXRG)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101809407 (RXRG)
Nuclear receptors [BR:
fab03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101809407 (RXRG)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
101809407
NCBI-ProteinID:
XP_005049857
UniProt:
U3JZQ7
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Position
8:complement(2828773..2852637)
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AA seq
457 aa
AA seq
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MYGNYPHFIKFPAGFGNSPVHASSSSVSLSSGLSSGNPVEGPHGYLEPPMSALSSPVSAL
GSPYRVIASSLGSHPVALSSAPGVNFVTHASPQLNVLNNVSSSEDVKPLPGLPGMGNVNY
PSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKR
QRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSDNEAESTSSGSEDMPVERILEAELAV
EPKTEAYSDMGTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGW
NELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKS
ELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPAL
RSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQVT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaattatcctcacttcattaagtttcctgcgggctttggcaactcccccgtg
cacgccagctcctcgtcggtgagcctgtcctcgggcctgtcctcggggaatcccgtggag
ggaccccacgggtacctcgagccccccatgagcgccctgagctccccggtgagcgccctg
ggctcgccctacagggtcatcgcctcctccctgggctcccaccccgtcgctctgtcctcc
gctcccggcgtcaatttcgtgacccacgccagcccacagctcaatgtcctgaacaacgtc
agcagctcggaggatgtcaagcccttgccgggtctcccggggatggggaacgtgaattat
ccatccacaagtccaggatccctagccaaacacatctgtgccatctgtggggacaggtcc
tcagggaagcactatggggtgtacagctgtgagggctgcaaaggcttcttcaagaggacg
atcaggaaggacctgatctacacctgccgggataacaaggactgcctcatcgacaagcgc
caacgcaaccgctgccagtactgccgctatcagaagtgcctggccatgggcatgaagagg
gaagctgtgcaggaggagaggcagaggagcagggagcgcagcgacaacgaggccgagtcc
accagcagtggcagtgaggacatgcccgtggagaggatcctggaagctgagctggcagtg
gagcccaaaacggaggcgtacagtgatatgggcacagagagctcgacaaacgaccctgtc
accaacatctgccacgctgctgacaagcagctcttcacgctcgtggagtgggccaagcgc
atcccccacttctctgacctgactctggaagaccaagtcatcctcctccgggcaggctgg
aatgagctgctcattgcctctttctcccatcgctccgtgtcagtccaggacgggatcctg
ctggccacgggcttgcacgtgcaccgcagcagcgcccacagcgctggcgtgggctccatc
ttcgacagggttttgacagagctggtgtccaaaatgaaagacatgcagatggataagtcg
gagctggggtgcctgcgagccattgtcctgtttaacccagatgccaagggtttgtccagc
ccctcggaagtggagtcgctgcgggagaaggtctatgccacgctggaagcctacaccaag
cagaaataccccgagcagcccgggcggtttgccaaactcctcctgcgcctgccggcgctg
cggtccatcgggctgaagtgcctggagcacctcttcttcttcaagctgattggagacacc
cccatcgacaccttcctcatggagatgctggagacacccctgcaggtcacctga
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