Ficedula albicollis (collared flycatcher): 101809561
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Entry
101809561 CDS
T02815
Symbol
DDX19B
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101809561 (DDX19B)
03015 mRNA surveillance pathway
101809561 (DDX19B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101809561 (DDX19B)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101809561 (DDX19B)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101809561 (DDX19B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101809561
NCBI-ProteinID:
XP_005057814
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All DBs
Position
21:complement(1204282..1215923)
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AA seq
370 aa
AA seq
DB search
MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLS
PTYELALQTGKVIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLK
FIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVV
PDPNIIKLKREEETLDTIKQYYVLCSNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWL
AAELSREGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFD
LPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTD
DLDEIEKINN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaacagaccatctaagatccaagagaatgccctgcccatgatgcttgctgag
cccccgcagaacctcatcgcgcagtcgcagtccggtactggcaagacagctgccttcgtc
ctggccatgctcagcagggttgagcctggcaacaagtatccacagtgtttgtgcctttca
ccaacatacgagctggcacttcagacaggaaaagtgattgaacagatgggaaacttctac
ccagagctgaaacttgcatacgctgttcgaggcaacaaactggagagagggcagaagatc
tcggagcagatcgtcatcggcacacctggcaccgtgctggactggtgctccaaactgaag
ttcatcgatcccaagaagatcaaggtgtttgtgttggatgaggcagatgtgatgattgcc
acccagggccaccaggaccagagtatccgcattcagagaatgctccccagggactgccag
atgctcctgttttccgccactttcgaggattctgtgtggaagtttgctcaaaaagttgtt
cctgacccaaacatcatcaaactgaagcgtgaggaggagaccctggacaccatcaagcag
tattatgtgctgtgcagtaacagagatgagaagttccgggctctctgtaacatctacggc
gccatcaccatcgcccaggccatgatcttctgccatacgcggaagacggcggggtggctg
gcggctgagctgtcccgcgagggccatcaggtggcgctgctgagcggggagatgatggtg
gagcagagagctgccgtgatcgagcgcttccgagagggcaaggagaaggtgctggtgacc
acaaacgtctgtgccagagggatcgatgtagagcaggtctctgttgttatcaattttgac
ctgcccgtggataaggatggaaatcccgacaatgagacctacctgcaccggatcggccgc
accggccgcttcggcaagcgggggctggccatcaacatggtggacagcaagcacagcatg
aacattctcaacagaatccaggaacatttcaacaaaaagataaacaaattggatactgat
gacttggatgaaattgagaagataaataactga
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