Ficedula albicollis (collared flycatcher): 101809690
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Entry
101809690 CDS
T02815
Symbol
RABGEF1
Name
(RefSeq) RAB guanine nucleotide exchange factor 1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101809690 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101809690 (RABGEF1)
Membrane trafficking [BR:
fab04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101809690 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
101809690 (RABGEF1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
101809690
NCBI-ProteinID:
XP_016158491
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All DBs
Position
19:6355680..6375828
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AA seq
499 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKALAGK
LKAEIQEAKAPSPAIHRQASIETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRD
LSIEEQSECAQDFYQNVADRLQTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDE
KKDLAVQKRIRALHWVTPQMLCVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACIT
KCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGED
GYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMCK
SLDLLSQLNERQERIVSEAKKLEKDLIDWTDGITKEVEDIVEKYPLEIKPKSQALAAIDS
ENVENDKLPPPLQPQVYAG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtcggagcgcagggggatccacgtggatcagtcggagctgctgtgcaag
aagggctgtggttactatggcaatcctgcctggcagggcttctgctccaagtgctggagg
gaggagtaccacaaggccaggcagaagcagattcaagaggactgggagctggcagagcgg
ctccagcgtgaggaggaagaagcctatgccagcagccagagcacccaaggggcacagtcc
ctgaccttttcaaagtttgaggagaagaaaaccaatgaaaaaacaagaaaggtcactact
gtgaagaagttcttcactgcttcctccagagcaggagctaagaaggcgttggctggcaag
ctgaaagcagagatccaggaggccaaagctcccagccctgccatccacaggcaggccagc
atcgagacagacagagtgtccaaggagttcatagaattcatcaggacttaccagaagcct
ggccaggatatctacaagcaatgcaaactctttttggacaccatgagtcataaaagggat
ttaagcattgaggaacaatctgagtgtgcccaggacttctaccaaaatgtagcagacagg
ctgcagactcggtggaaagtgccccctgaaaaagtggagaaggcaatggatgaggttgag
aaatacatcatgactcgacagtataaatatgttttttgccctgagacaactgatgatgag
aagaaagaccttgctgtccaaaaaaggatcagggctttgcactgggtgactccccagatg
ctgtgtgttcctgtcagtgaggaaatcccagaagtctctgacatggttgtaaaggcaatt
acagatatcattgagatggactccaagcgtgtccctcgggataaactggcctgcatcacc
aaatgcagcaagcacatcttcaatgccatcaaaatcaccaaaaatgagccagcctctgct
gatgacttcctgcccaccctgatttacatcgtgctcaaggggaaccccccacgcctgcag
tccaacatccagtacatcactcgcttctgcaaccccagcaggctgatgactggggaggat
ggatattatttcaccaacctgtgctgtgctgtggccttcattgaaaaactggatgctcag
tctttaaatctgagccaggaagattttgatcgtttcatgactggccagacctccccaaaa
aagcaggaatctgacagtttctcccctgatgtgtgcctgggggtgaagcaaatgtgcaaa
agcttagacctcctctctcagttgaatgagagacaggaaagaattgtcagtgaagccaag
aagttggagaaggacctgattgattggactgatggcatcaccaaggaggtggaagatatt
gtggagaaatatcccttagagatcaaaccaaaaagtcaagccttggcagccattgactct
gaaaatgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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