Ficedula albicollis (collared flycatcher): 101809710
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Entry
101809710 CDS
T02815
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab02010
ABC transporters
fab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101809710 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101809710 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fab02000
]
101809710 (CFTR)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
101809710 (CFTR)
Transporters [BR:
fab02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
101809710 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
T2SSE
RsgA_GTPase
MeaB
AAA_23
NB-ARC
NTPase_1
Motif
Other DBs
NCBI-GeneID:
101809710
NCBI-ProteinID:
XP_005039377
LinkDB
All DBs
Position
1A:complement(24585293..24676630)
Genome browser
AA seq
1651 aa
AA seq
DB search
MIKCGQFPGVQPAPRFLLVLSLMKQNREGFEGGLRHKGIRCGDRPVCRCARPRVRAQAAG
GGSWPWVPPRANAAKAGPGSRGSRGLRAGALPDMIEGNDPKYNLFPKFYKHPALQHTCIG
ILVEAGWYQLDIQFLTAQQQHKQLLKIHLETNIAHQANSSYDYHSNLEHLAQRTDWPDLV
RAYRWTNPILKKGYRRRLELSDIYQIPSADSADNLSEKLEREWDRELATSEKKPKLINAL
RRCFFWKFMFYGIILYLGEVTKSVQPLLLGRIIASYDPDNSDERSIAYYLAIGLCLLFFV
RTLLIHPAVFGLHHIGMQMRIAMFSLIYKKILKLSSRVLDKISTGQLVSLLSNNLNKFDE
GLALAHFVWIAPLQVALLMGLLWDMLGASAFSGLALLIVMVLVQAWLGQMMMKYRNKRAG
KINERLVITSEVIENIQSVKAYCWEDAMEKMIENIRETELKLTRKAAYVRYFNSSAFFFS
GFFVVFLAVLPYAVTKGIILRKIFTTISFCIVLRMTVTRQFPGSVQTWYDSIGAINKIQD
FLLKKEYKALEYNLTTTGVELDKVTAFWDEGIGELFVKANQENNNSKAPSTDSNLFFSNF
PLHASPVLQDINFKIEKGQLLAVSGSTGAGKTSLLMLIMGELEPSQGKIKHSGRISFSPQ
VSWIMPGTIKENIIFGVSYDEYRYKSVIKACQLEEDISKFPDKDYTLLGEGGIILSGGQR
ARISLARAVYKDADLYLLDSPFGHLDIFTEKEIFESCVCKLMANKTRILVTSKLEHLKIA
DKILILHEGSCYFYGTFSELQGQRPDFSSELMGFNSFDQFSAERRNSILTETLRRFSIEG
EGTGSRNEIKKQSFKQKSEFNDKRKNSIIISPLNANRKFSVVPKNGVQVNGIDDGHSDPP
ERRLSLVPDLEQGDVALLRTGMLQADHLLQGRRRQSVLNLMTSTPASYGPNFSKKGSTTF
RKMSMVPQTALSSEIDIYTRRVSRDSVLDITDEINEEDLKECFSDDAEGMGTVATWNTYF
RYVTIHKNLIFVLILCLIVFLIEVAASLGGVWFLQKAAMKANSTQSENSTSDKPPVIVTD
TSSYYIIYIYVGVADTLLAMGVFRGLPLVHTLITVSKTLHQKMVHAVLHAPMSAFNSLKA
GGMLNRFSKDTAVLDDLLPLTVFDFIQLILIVIGAITVVSILQPYIFLASVPVIAAFILL
RAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANW
FLYLSTLRWFQMRIEIIFVVFFVAVAFISILTTGDGPGRAGIILTLAMNIMGTLQWAVNS
SIDVDSLMRSVGRIFKFIDMPTEETKSIKPQKNNQFSDALVIANRHVKEEKNWPSGGQMT
VKDLTAKYGEGGAAILENISFSISSGQRVGLLGRTGSGKSTLLFAFLRLLDTEGDIQIDG
VSWNTVSVQQWRKAFGVIPQKVFIFSGTFRMNLDPYGQWNDEEIWKVAEEVGLKSVIEQF
PGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTSQVIRKTLKHA
FANCTVILSEHRLEAMLECQRFLVIEDNKLRQYESIQKLLNEKSSFRQAISHAERLKLLP
AHHRNSSKRKPRPQITALQEETEEEVQETRL
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatgcggacagtttcctggagtccagcctgccccgcgtttcttactggttttg
tcattaatgaagcagaatcgggaaggattcgagggaggtctgagacacaaaggaatccgg
tgcggtgacaggcccgtgtgccgctgtgctcgcccgcgggtgcgcgcccaggcggcgggc
gggggctcctggccctgggtgccaccgagggcaaacgccgctaaagccggtcccggctcc
cgcggctctcgggggctgcgggcaggcgcccttccagatatgatagaggggaatgatccc
aaatataacttgttcccaaagttttacaaacatccagctttgcagcatacatgtataggt
atacttgtggaggcaggatggtaccaacttgacatccagttcttgacagcgcaacaacag
cacaagcagctgttgaaaatccaccttgagacaaacatcgcacatcaggccaactcctcc
tacgattaccactccaacctggagcacttggcacagcgcacagattggccagatctagtg
agggcatacagatggacgaatccaattttgaaaaagggttacagacgacggttggagctg
tcagatatttatcaaatcccttctgcagactctgctgataatctttctgaaaaactggaa
agagaatgggacagagagctggcaacttcagagaagaaacccaaactcattaatgctctt
cgaagatgctttttctggaaatttatgttctatggaataattttatacttaggggaagtc
accaaatctgtgcaaccccttctgctggggagaataattgcttcctatgatccagacaac
tctgatgaaagatccatagcctactacctggccattggcttgtgccttctcttttttgtg
agaacactgcttatacatcctgctgtattcggtcttcatcatattggaatgcaaatgagg
atagctatgtttagcttaatttataagaagatcctaaaactatcaagcagagttctggat
aaaataagtactggacaattggttagtcttctttccaacaatctgaacaaatttgatgag
ggtcttgctctggctcattttgtatggattgcaccattacaagtggcactactgatggga
ttgctctgggatatgttaggagcttctgcattttctggacttgctcttctaatagtcatg
gtcttagtccaagcctggctgggacaaatgatgatgaaatacaggaataagagagcagga
aagatcaatgagagacttgtcatcacctcagaagtaattgaaaatatacagtcagttaaa
gcctattgttgggaggatgcaatggaaaaaatgattgaaaacatccgtgaaactgaactg
aagcttacccgaaaagctgcttatgtgagatatttcaacagctcagccttcttcttctca
ggcttttttgtggtgttcttagctgtgcttccatatgctgtgacgaaaggaattattctc
cgaaaaatatttaccaccatttccttctgcattgttcttcgaatgacagtgaccaggcag
tttcccggctctgtacagacctggtatgactctattggagcaataaacaaaatacaggat
ttcttgctgaaaaaagaatataaagctctggaatataatctaacaactactggggttgag
ctggacaaagtaacagctttttgggatgagggaattggagagctgtttgtaaaagcaaac
caggaaaacaacaacagcaaagctcctagcactgacagcaatctcttcttcagtaatttt
ccccttcatgcctctcctgttcttcaggatataaatttcaagattgagaaggggcagtta
ttagctgtttctggatctactggagcaggcaagacttctcttctgatgttgataatggga
gaattggagccttcgcagggtaaaattaaacacagtggaaggatatccttttcacctcaa
gtctcctggatcatgcctggaacaataaaagaaaacataatttttggtgtatcctatgat
gaataccggtacaagagcgtcatcaaagcctgccaactggaagaggatatttccaagttc
cctgacaaagactatacgctgctgggtgaaggtggaatcattctgagtggaggtcaacgg
gcacgaatctcgctggcaagggcagtgtacaaagatgctgatttgtatctcctggattct
ccttttggtcacttagacatttttacagaaaaagagatatttgaaagctgtgtgtgcaaa
ctgatggcaaataaaactaggatcttagttacttcaaaactggaacacttaaagattgct
gacaaaatattaatcttacatgaggggagctgctatttctatggaacattttctgaactt
cagggtcaacggccggacttcagctcagagctgatgggattcaattcttttgatcagttc
agtgcagagagaagaaattcaatccttactgagactctccgacgattttccattgaaggt
gaaggcacagggtcgcgcaatgaaataaagaagcaatcttttaaacaaaaatcagaattt
aatgacaaaaggaagaactccataatcattagcccccttaatgcgaacaggaagttctca
gtggtgccgaagaacggggtgcaggtcaatgggatagacgatggccacagcgacccacca
gagcggaggctgtcgctggtgcctgacctggagcagggggacgtggctctgctgaggact
ggcatgctccaggctgaccacctgctgcaggggcggaggaggcagtcggtgctgaacctg
atgacgagcacccccgccagctacggcccaaacttctccaaaaagggaagcacgaccttt
cggaaaatgtccatggtgccccagactgccctctcctctgagatagatatctacacccgg
cgggtgtctcgagacagcgtcctggacataactgatgaaatcaacgaagaggatttgaag
gaatgcttcagtgatgatgctgaaggcatgggtactgttgctacatggaatacctatttc
agatacgttacaatccacaaaaacttgatttttgttctgattttgtgtttgattgtcttc
ttaattgaggtagctgcttctcttggtggagtatggtttcttcaaaaggcagctatgaag
gcaaattcaacacagtcagaaaacagcacctctgacaaacctcctgtgattgtcactgat
actagcagctactacatcatttacatctatgtgggtgtggcagatactctgcttgccatg
ggagtcttcagaggtttgccccttgtgcatacacttataacagtgtctaaaactcttcat
caaaagatggtgcatgcagttcttcatgcacctatgtcagccttcaactctctgaaagca
ggtggtatgcttaacaggttctcaaaagatacagcagtactggatgacttacttccactt
acagtatttgacttcattcagttaatactgattgtgattggcgctataacagtagtctca
atattacaaccctacatcttcctggcatcagtgcctgtgatagcagcctttattctgtta
agggcatacttcctccacacttctcagcagctgaaacaactggaatctgaagctcggagt
cccattttcacccaccttgtcacaagcttaaaggggctgtggacgctgagagcttttggg
cggcagccgtattttgagaccttatttcacaaagctctgaacctacacacggcaaactgg
ttcctctacctgtcaacactgcgctggttccagatgaggatagaaattatttttgttgtc
ttttttgttgctgtggcctttatctctatcctaactacaggagatggaccaggtagagct
ggaattattcttactttagctatgaacatcatgggaacattgcagtgggcagtaaactca
agcatagatgttgatagtttgatgcggtctgtcggacgaatatttaaattcattgacatg
ccaacagaagagacaaagagcattaagccacagaagaataatcagttttcagatgccctt
gtaattgcaaacaggcatgtgaaggaagagaagaattggccatctgggggccaaatgact
gtgaaagaccttacagccaaatacggagaaggaggagcggctatactagaaaacatttcc
ttttcgataagttcagggcagagggtgggccttttaggaagaacaggttcaggaaaaagc
actttactttttgcatttttaagactgctggatacagaaggggatatccagattgatggg
gtctcctggaacactgtcagcgtgcagcaatggagaaaagcatttggagtgattcctcag
aaagtgttcatattttctggaacttttcggatgaatttggatccttacgggcagtggaat
gatgaagaaatatggaaagttgcagaggaggttgggctgaagtctgtaatagagcaattt
ccaggcaagcttgattttgttcttgtggatggaggctgtgtcctcagtcatggccacaaa
cagctgatgtgcctcgctcgctcagtcctcagcaaagctaaaatcttgctgctcgatgaa
ccaagtgctcacctggaccctgtaacttcccaagtgatcaggaagaccctgaagcacgcg
tttgccaactgcacggtgatactctccgagcacaggctggaggccatgctggagtgccag
agatttttggtaatcgaggacaataaattgaggcagtacgaatccattcagaagctgctg
aatgagaagagctccttcaggcaggccatcagtcacgccgagcgcctcaagctgctccca
gcacaccacagaaactccagcaaacgtaaaccccgaccccaaatcactgccttgcaggag
gagacggaggaagaagtgcaggagacaagactgtga
DBGET
integrated database retrieval system
