Ficedula albicollis (collared flycatcher): 101809723
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Entry
101809723 CDS
T02815
Symbol
TBPL1
Name
(RefSeq) TATA-box binding protein like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101809723 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101809723 (TBPL1)
03021 Transcription machinery [BR:
fab03021
]
101809723 (TBPL1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
101809723 (TBPL1)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101809723 (TBPL1)
RNA polymerase III system
TFIIIB
101809723 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
101809723 (TBPL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
101809723
NCBI-ProteinID:
XP_005043648
UniProt:
U3KBI6
LinkDB
All DBs
Position
3:complement(58826366..58834428)
Genome browser
AA seq
183 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggacagtgatgttgcactggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgtcatttaaacttgaggaagattgcattagaaggagcaaatgtgatatac
aagcgtgatgttgggaaggttttaatgaagcttaggaaacctaggattacggccacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgactagctcgtagtctacagaaactaggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagatcagattgccagaattt
acaaagaataacagacctcatgcgagttatgaaccagaacttcatcctgccgtgtgttac
agaataaaatctctcagagctaccttacagattttttccacaggcagtatcacagttaca
gggccaaacgtaaaggctgttgccagtgctgtggaacagatttatccattcgtgtttgaa
agcaggaaataa
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