KEGG   Ficedula albicollis (collared flycatcher): 101809727
Entry
101809727         CDS       T02815                                 
Symbol
HELQ
Name
(RefSeq) helicase, POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fab03400]
    101809727 (HELQ)
Enzymes [BR:fab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     101809727 (HELQ)
DNA repair and recombination proteins [BR:fab03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    101809727 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 Helicase_C DEAD HHH_5 DUF4332 DNA_pol_lambd_f ResIII DGKD_4H DUF3135 Cdd1
Other DBs
NCBI-GeneID: 101809727
NCBI-ProteinID: XP_016153332
LinkDB
Position
4:complement(11193830..11205992)
AA seq 708 aa
MILPYVAIVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRVKKSLYIATIEKGHALV
NSLIETERIDDLGLVVVDELHMLGEGSRGAILEITLAKILYTSKTTQIIGMSATLNNVGD
LQKFLQAEYYTNNFRPVDLKEYIKIRDTIYAVDSKSENGFAFSRLLNFKYSSNLERADPD
HIIALVTEVIPKYSCLIFCPTKKSCENVASLVCKYLKKEFRAHKEREKEDLIKNLKSIGN
GTVCPVLKQTVPFGIAYHHSGLTNDERKSIEEAYSSGVLCLLACTATLAAGVNLPARRVI
LRSPYIGNDFLKKNQYKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPLENCYSN
LLLELTKGMQSLLLSLVGLKIAVTYEEVDNFMCCTLLGVQQQLLPKEKSLSEVIKDGLEN
LIEKGLLKGTISEKDHNSKSALTITPLGKATYKSSIDLAYCNLLYRELRKGLEGLVLESN
LHLLYLSTPYDMTFTCSPDWMIYFRQFNQLSAAERKVADIVGVPESFITKKASGQAIRKN
VDNAVVNRLYLTFVLYSLLKETNIWSVSEKFNMSRGYVQNLLSSAASFASCLLHFCEELE
EFWVYKALLTELTKQLTYCVKAELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETL
VRMIEHLSRRQAKQIVSSAKMLLSEKAEALQEEVEELLKVPTDIPGTH
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgatcctgccatatgttgccattgtccaagaaaaggttaggggtttatcaagttttggg
atagaactgggtttcctggttgaagaatatgcaggaagtaaaggaagatttccaccaatc
aaaaggagagtaaaaaaatctctttatattgctactatagaaaaaggacatgctctggtg
aactccttaattgaaacagaacgaattgatgaccttggcctggttgtggtagatgagctg
catatgctcggggagggaagtcgtggagcaatactggaaattactctggccaaaattctt
tacaccagtaagacgacacagatcattggcatgagtgcaacgttaaataatgttggagac
ctgcagaagttcctgcaagcagagtactacactaataattttagaccggtagatttgaag
gaatacataaagatacgagacaccatttatgcagttgacagcaaatctgaaaatggcttt
gctttttcacgtctccttaatttcaagtattctagtaatctggagagagcagatcctgac
catatcattgcactggttactgaagttattcctaaatattcctgccttatcttttgtccc
actaaaaagagttgtgaaaatgtggcttcattggtgtgcaagtacctcaagaaagaattt
agagctcacaaggagagggaaaaagaagatctcatcaagaacctaaagagcattggaaat
ggaactgtctgtcctgttttgaagcaaacagtcccttttggtattgcctatcaccacagt
ggccttacaaatgatgaaagaaaaagcatagaggaagcttattcttcaggtgtcctgtgt
ctacttgcttgcacagccactctagctgctggagtcaacctgccagctagaagggtgatt
ctcagatctccttatattggcaatgacttcctgaagaagaaccagtataaacagatgatt
ggcagagctggtcgagctggtattgacagtgctggagaaagtattctcatagtgcaagaa
aaagacaaacacttggttcaggatttagttcacagtcctttggagaattgctacagcaat
cttctgctggagttgaccaagggaatgcagagcctgttgttatctttagttggactgaag
atagcagttacctatgaggaagtggacaattttatgtgctgtacattgctgggtgttcag
caacagctgctgcctaaagagaagagcctctcagaggtaattaaagatgggctggaaaat
ctaatagaaaaaggactcctaaaaggaacaatatctgagaaggaccacaattccaaatct
gcactgacaatcacacccttgggtaaagctacatataagagctcaatagacttggcatac
tgcaatcttctgtacagggagctgaggaagggtttggaggggctggttctcgagagcaat
cttcatctcctgtatctgtcaactccctatgatatgacttttacctgtagcccagattgg
atgatatactttagacagttcaaccagctaagtgcagcagagcgaaaagtagcagacatt
gtgggagtacctgaaagctttattacaaaaaaggcttctggtcaagccatcagaaagaat
gtggacaatgctgtggtgaacaggctctacctgacatttgtcctttattccctactgaaa
gagaccaacatatggagtgtttcagagaaatttaacatgtctcggggatatgtgcaaaat
ctcctcagttctgctgcctcctttgcatcctgccttctacatttctgtgaggaattggaa
gaattctgggtttataaagccttgctgacagaacttaccaagcagttgacatactgtgtt
aaggcagaactcatccctctgatggaggtagcaggagttctagaggcacgagccaaacag
ctttacaatgcagggtacaaaactttagcacacttggctaatgcaaatccagaaactctg
gtgaggatgattgagcacttgtcacgacgtcaagccaaacaaatcgtttcatctgcaaag
atgctgctgagtgaaaaagctgaggctttgcaggaagaagttgaagaactcttaaaagtg
ccaacagatatcccagggacccactga

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