Ficedula albicollis (collared flycatcher): 101809796
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Entry
101809796 CDS
T02815
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101809796 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
101809796
NCBI-ProteinID:
XP_005048841
UniProt:
U3JHW6
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All DBs
Position
6:27102283..27138490
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVQSSKEREKEAKASGGFGKEGKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAIK
ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaggactgtaaagagaaggatccaaaagtccaatca
tcaaaagaaagggagaaggaggctaaggcctctggaggatttgggaaagagggcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatcctgccacaggt
actcgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaggag
aattctatgcgcttggacttgtccaagaggtctatacacttgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtgcctaccagca
gaggtgggctgtcttgtgaacctggtgacactggctctgagtgaaaactcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
ctgcgagaaatcccctcggtggtgtacaggctaagctccctcgccactctgtacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
acacagatcaccaaccttgacttgcagcacaatgagctcctggacctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccc
aagtctttagcaaaatgcagtgaactcgatgagctgaacttggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacattggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacgtctctccccttggacttcgggact
tggacaagcatggtagagctgaacttagcgactaaccagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccacatggaattggaaatctacggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaac
aatcagctgaccacccttcccagaggaatcggtcacctcaccaatctgacgcaccttggg
ctcggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccactcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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