Ficedula albicollis (collared flycatcher): 101809816
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Entry
101809816 CDS
T02815
Symbol
TMC6
Name
(RefSeq) transmembrane channel like 6
KO
K21988
transmembrane channel-like protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101809816 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fab02000
]
101809816 (TMC6)
03037 Cilium and associated proteins [BR:
fab03037
]
101809816 (TMC6)
Transporters [BR:
fab02000
]
Other transporters
Pores ion channels [TC:
1
]
101809816 (TMC6)
Cilium and associated proteins [BR:
fab03037
]
Other cilia and associated proteins
Stereociliary proteins
101809816 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
101809816
NCBI-ProteinID:
XP_016158202
LinkDB
All DBs
Position
18:12802794..12810218
Genome browser
AA seq
799 aa
AA seq
DB search
MSQPPSITLHVPEGTESDGQELSPDNERALHTSFHQLILEQSSLIEAGLELELQERSRES
PACLAARDACAVAWPEPRQGEEHPSYSSASLQILASMPSRTIGRSLGAVISQYCNRTARL
RRRSSRPPLQQLCRAARPSLRQYGLDTDPAGATLQEKRRLLVKELLSLSPSQCSHMLLTM
PLSLAEKRILRRQLSGQRGPLGQRAQHWAPCSPCGWPKVCVVLGCRGLWYRLLSLLRTAQ
PWHYALKQIGGRFGSSVLSYFLFLKTLLMLNFFSFFILLAFVVVVQAVYPSAPVSPQPFT
GLELLTGAGSFTHSLLYYGYYSNVTLNDPCSSSPKGSECPLTAPPLPYNLPLAYLFSVGV
SFLVTCILLVYSVSHSFRESVGSSTGVLAIKVFCAWDFKVMQKRSVKLQCQNICTQLKEL
LVEQRCRSRSQSRLQCLGHCLVVLLAWLLALGSASGCVLALHRFSEHMHTVQQELQAQGS
DRWQQEAVLLVLPLVVSLLNALMPHLYNLLAMWEKQDSPVTQVSVAIVRNLILKMMVLSL
LCYQWLSRSVICSTEECWETCVGQDLYRFTVMDFIFTLLDTLFGELIWRLILEKRLKTKQ
RPEFDIARNVLELMYGQTLTWLGILFAPLLPAVQMLKLLLLFYIKKTSLMRNCQSPSKPW
QASRMSTVFITLLCFPSFLGAAAFLSYTIWSVQPSETCGPFRGLETIYKSGKRWVLVLEK
SNPNITWFAWVYQHLLENAGLQFFMSVGLIAVIYFNIQVVRGRQKVICLLQEQIANEGQD
KVFLIQKLHSVYEQRQRRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgccctccatcaccctgcacgtccccgagggcaccgagagcgatggccag
gagctcagcccggacaacgagagagccctgcacacctcattccaccagctcatcctggag
cagagcagcttgatcgaggcaggtctggagctggagttgcaggagaggagcagagagtcc
ccagcctgcttggctgctcgagatgcctgtgcagtggcctggccagagcccaggcaaggt
gaggagcaccccagctactcctctgcctccctgcagatcttggccagcatgcccagccgc
accatcggccgcagcctcggggccgtcatctcccagtactgcaaccgcacggcgcggctg
cggcgccgcagcagccgccctcccctgcagcagctgtgccgcgcggcacggcccagcctg
cgccagtacggcctggacaccgaccctgccggcgccacgctgcaagagaagcggcgcctg
ctggtgaaggagctgctgagcctctcgcccagccagtgcagccacatgctgctcaccatg
cccctcagcctggcggagaaacgcatcctgcggcggcagctgagcgggcagaggggcccc
ctggggcagcgtgcccagcactgggccccctgctcaccctgtggctggcccaaggtctgc
gttgtcctcggctgccgaggtctctggtacaggctcctgtccctgctccgcactgcccag
ccctggcactatgccctgaagcagattggtggccgcttcggctccagtgtcctctcctac
ttcctcttcctcaagacgctccttatgttgaacttcttttccttcttcatcctcctggcc
ttcgtggtggtcgtgcaggctgtgtacccctctgcaccagtcagcccccagcccttcact
ggcctggagctgctcacaggagcgggctccttcacgcactcgctgctgtactacggctac
tacagcaacgtgaccctaaacgacccctgcagctccagccctaagggcagcgagtgcccc
ctcacagcccctccgctcccctacaacttgccactggcctacctcttcagtgttggggtc
tccttccttgtcacctgcatcctgctggtgtacagtgtgtcccactcttttcgggagagc
gtgggaagctccacgggggtcttggccatcaaagtcttctgtgcctgggacttcaaggtg
atgcagaagcgctcagtgaagctgcagtgccagaacatctgcacccagctgaaggagctg
ctggtggagcagcgctgccgctcccgctcccagagccgcctccagtgcctgggccactgc
ctggtggtgctgctggcctggctgctggctctgggctcggcctcgggctgcgtgctggct
ctgcaccgcttctcggagcacatgcacacggttcagcaggagctacaggcacagggcagt
gacagatggcagcaagaagccgttctgctggtcctgccccttgtggtgtccctcctcaat
gccttgatgccccacctgtacaacctgctggccatgtgggagaagcaggactccccagtg
acacaggtctccgtggcaatcgtcaggaacctcatcctgaagatgatggttctcagcctg
ctgtgctaccagtggctcagccggagcgttatctgctcaacagaggagtgctgggagaca
tgtgtgggacaggacctttatcgcttcacggtgatggatttcatattcaccttgctggat
acactctttggggagctgatctggaggctaatcctggagaagaggctgaagacaaagcag
aggccagagtttgatatcgcccgaaacgtgctggagctgatgtatgggcagaccctgacc
tggctgggcattctcttcgcgccacttctgccagctgtgcagatgctgaagctgctgctg
ctcttctatatcaaaaagaccagcctgatgcggaactgccagtcccccagcaagccctgg
caagcatcacgcatgagcaccgtgttcatcaccctgctgtgcttcccctccttcctgggt
gcagctgccttcctctcctacaccatctggtcggtgcagccatcagaaacctgcggtccc
ttccgggggctggaaaccatctacaagtcagggaagaggtgggtgctggtgctggagaag
tccaaccccaacatcacctggtttgcctgggtctaccagcatctcttggagaacgccggc
ctccagttcttcatgtctgtgggcctgatagctgtgatctacttcaacatccaggtggta
agaggccgccagaaggtcatctgcctgctgcaggagcagattgccaacgaagggcaagat
aaggtatttctcatccagaagcttcactctgtttacgagcagagacagagacgttcctga
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