Ficedula albicollis (collared flycatcher): 101809818
Help
Entry
101809818 CDS
T02815
Symbol
MED13
Name
(RefSeq) mediator complex subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101809818 (MED13)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101809818 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
101809818
NCBI-ProteinID:
XP_005056685
UniProt:
U3JSI7
LinkDB
All DBs
Position
19:9202216..9253771
Genome browser
AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSSVGAPH
CSTACLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCEEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGPQQPAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMSAPDSQVRFANMRAGEGAKPPALHGAELANSPQPPPLSPHP
CDSTDEGGPKAPSTPQSQHFYQMPTPDPLVPTKAMEDRLDGLSQPFPAAFPEVIEPTVYV
GTAVSLEEDEADTTWKYYKVPKKKDVEFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQYLTAVATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIE
REVGKKHKAEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRLAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGTDDKSNCKEAKTGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSTVGAQFRIEVDEGFCSPKPAEIKD
FSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPPGPAMP
FIKDGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSIEHGSGGLKEPEKLPDDLILLLQDQCTN
LFSPFGAADQDSMAKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNDAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPSGQAASALPPVTAP
AANPNTPASAPAAPTSSTITVTSSSAMSSAATTANSTLTTTAPSSSSASLASGIPTSKPS
SFPPFSNMSNTTPASLPAQAAPVPNGQTGGQQQQPTLQTAGMSGDTAAAPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALRSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPGGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPIHFVVLNQLYNFIMNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgctacgtgtggcagggcccgacatct
gcccccatcctgttcccggtcacggaggaggatcccatcctgagcagcttcagccgctgc
ctcaaggccgacgtgctcagcgtgtggcgccgcgaccagcggccggggcgcagggagctc
tggatattctggtggggggatgaccccaactttgctgacctgatccatcatgatctctca
gaagaggaagatggggtttgggagaacgggctgtcctacgagtgccgcactctgctgttc
aaagccgtgcacaacctgctggagaggtgcctgatgaacaggaacttcgtgcgcatcggg
aaatggttcgtcaagccttacgagaaggatgagaaacccatcaacaaaagtgagcacttg
tcctgctcgttcaccttcttcctgcacggggacagcaacgtgtgcaccagcgtggagatc
agccagcaccagcccgtgtacctgctcagtgaggagcacctcaccctggcccagcagtcc
aacagccccttccaagttatcctgagcccctttgggttgaatggcacactcacagggcag
tccttcaagctttctgattcatccacaaaaaagctgattggggagtggaagcaattctac
cctgtcacatccaacttgaaggagggatctgaggaaaaacaagaagaaatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgaggatggtgtacccggcg
tgcttcgtgctggtccctcagacagacatccctgctcccagctccgtgggggctccccac
tgctccactgcctgcctgggggtccaccaagtgcctgcttccaccagggaccctgccatg
tcctctgtcaccctgactccacccacgtccccggaggaagttcagacagttgatgctcag
tctgcccagaaatgggtgaagttttcctcggtttcagatggatttatctcagacagtacc
agccatcacggaggcaaaatccccagaaaactggccaaccaggtggtggacagagtctgg
caagaatgcaacatgaacagagcacagaacaagaggaagtattctgctacatcaaatggc
ttgtgtgaggaggagacagctgacaaggtggcatcctgggattttgttgaagccacacag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggccccacctgtgggcccccagcagccggcggctccgaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagtgatgatgttgccatggaggcagattcagccagtcagaggctggtgatgagt
gcaccagacagccaagtgaggtttgccaacatgcgagctggcgagggagccaagcccccg
gcgctgcacggggccgagctggccaactcgccgcagccgccgccgctcagcccccacccc
tgcgacagcaccgacgagggggggcccaaagctccctccaccccccagagtcagcatttc
taccagatgccaactccagaccccttggtccccactaaagcaatggaggacaggctggat
ggtttgtcccagccgttcccggccgccttccccgaggtcatcgagcccaccgtgtacgtc
ggcaccgccgtcagcctggaggaggatgaggctgacaccacttggaagtattataaagtt
ccaaagaaaaaggatgtggagttcttaccaccccagcttccaaatgataagttgagagat
gatccagtaatacctgctggacaggaaaatgtaacatcagttacagaattaatggtgcaa
tgtaggaaacctttgaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
tatttaacagctgtagcaacggaagctgaccaggaacctgaaatcgatccttatgccttt
gtggatggagatgtggaattcctatttcctgacagcaaaaaggacaggcagaacattgag
agggaagtggggaagaaacacaaggctgaggatgggacatccagtgttacagttttgtcc
catgaaggagaggatgcaatgtctctgtttagtccttctgtcaagcaagatgcccagcgc
ctggctgcccacgcccgcactgcctccaccagcctgttccacgagacagacctggtggtg
tcctacactgacctggacaatctcttcaattctgatgaagatgaactcacacctggatct
aaacgaacagtgaacggcaccgatgacaaatccaactgcaaagaggcaaaaacaggaaat
ctagacccactgtcatgcataagcaccgcagatctccataaaatgtatccaactccccct
tcactggaacaacatattatggggttttctccaatgaacatgaacaataaggagtatggc
agcatggacactacacttggaggaacagtgctggaagggaatagctctaccgtgggagct
cagttcagaatcgaagtagatgagggtttctgcagccccaaacctgctgaaatcaaggat
ttttcttatgtttataaacctgagaactgtcaagctttagtgggatgttccatgtttgca
ccactgaagactcttcccagccagtgtcttccccccatcaaactgcccgaggaatgcatt
taccgccagagctggactgtgggcaagctggatctgcttcctccaggccctgccatgcct
ttcatcaaagatggtgatgggagcaccatggaccaggagtacggccccgcctacaccccc
cagacccacactccgttcgggatgcccccgagcagcgcccctcccagcaacagcggcgct
gggatcctcccttctccctccacccctcgcttcccgactcccagaacacctcggactccc
cgcacgccccgcggggccggcgggcccgccagcgcccagggctcggtgaaatacgagaac
tcggatctgtactcgccggcctccaccccctccacgtgccggcccctgaactcggtggag
cctgcgaccgtgccttccatccccgaggcacacagcctgtacgtcaatctcatcctctcc
gagtccgtcatgaacctcttcaaagactgcaacttcgacagctgctgcatttgtgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcctgatccaacgcaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttcc
gggctgtttcttgaagatgagctggatattctggggcggaacacggagtgtggcaaagaa
gcagaaaaacgctttgaagctctcagagctacttccattgagcacggcagtggagggctg
aaagaacccgagaaactgcccgatgacttgatactgttgctgcaggatcaatgcaccaac
ctgttctcaccctttggagcagcagaccaagactccatggccaaagttggtgctgtcagc
aacctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgtggtggatgtcagcatgcagtgctcccag
gacatcctgcgcatgctgctctcgctccagcccgtgctgcaggacgccatccagaagaag
aggacggtgcgctcctggggcgtgcagggacccctcacctggcagcagttccacaaaatg
gctgggagaggctcctacggaactgatgagtccccagaaccactgccaatcccaacattt
ttgttgggatacgattacgatttcctggtgctctctccatttgcattgccctactgggag
aggctgatgctggagccgtacggatcccagcgagacgtcgcctacgtcgtggtgtgcccg
gagaacgaggctctgctcaacggagccaaaagcttctttagggatctgactgcaatatac
gagtcttgcaggcttggtcagcacagacctatctgtaagttactgcctgatgggatcatg
agggttggacctacagcctccaagaagctctcagagaagttggtcactgagtggttctcc
cagacagccaatgccaacaacgacgcgttctccaaactcaaactctacgctcaagtttgc
agatatgagctgggtccttatcttgcttctcagcctttggacaattctctactttcccaa
acaaacctggtccctccctccggccaggcagcctctgctctgcccccagtgacagcccct
gctgccaatcccaacactccagcatcagctcctgcagctcccaccagcagcaccatcacc
gtgacctccagcagtgccatgtcctctgcagccactacagccaactccaccctgaccacc
actgccccctcctcctcctctgccagcctggccagtggcattccaacgagcaagccttcc
tcattcccacctttcagcaatatgagcaacaccactcctgcctccctgcctgcccaggct
gcaccagtccccaatgggcaaactggggggcagcagcaacagccaacactgcaaacagca
gggatgtctggagacacggctgcagcacctgcacagccccatccagaggtttctgaaagc
actatggatcgtgataaagtcggagtccccacagatggagattcacatgctatcacctat
ccacctgcaattgtagtttacatcattgatcctttcacatatgaaaaaaaggatgagaac
agcagctcatccagtttgtggacacttggacttcttcgctgctttctggagatggttcag
gttcttcctcccaacatcaagaacatcatttctgtgcagattgtcccatgtcagtacctg
ctccagcctgtgaaacacgaggaccggcagatttacactcagcatttaaaatctttggca
ttttcagctttcactcagtgtcggagacctctcccaacttccaccaatgtgaaaacctta
actggctttggcccaggcttagccatggaaactgctcttaggagccctgatagacccgag
tgtattcgactctacacccctccttttatactggctccagtaaaggacaagcaaacagag
ctgggagaaacctttggagaagctggccagaagtacaatgtgctttttgtgggctattgt
ttgtctcatgatcagaggtggctgcttgcatcctgtacagacctctatggagagcagtta
gaaacttgcataattaatattgatgtaccgaacagagctcgcaggaaaaagggttctgct
cgcagactgggtctccagaaactctgggaatggtgcctgggactggtgcagatgagctct
ttgccatggagagttgtcatcggccgcttaggaagaataggacatggggaattaaaagac
tggagctgtttgctgagccgccggaacctgcagtcgctgagcaagaggctgaaggacatg
tgcaggatgtgtgggatctctgctgcagactcccccagcattctcagtgcttgcttggtg
gccatggaaccccagggatccttcattattatgccagattccgtgtccaccggctccgtg
ttcgggcgcagcaccaccctgaacatgcaaacctctcagctgaacacgccccaggacacc
tcctgcacccacatcctggtgttccccacctctgcatctgtgcaagtggcatcatccact
tacaccaccgagaacctggatctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatattctt
cctgcatctcctggtggatcccctgtgcattctccagggtcccactacccccatggaggt
gatatgggcaagggtcaaggcacagatcgattgctttccacagaatctcatgatgaagta
acaaatatactgcagcagccactggccctcggttattttgtgtcaactgccaaagcaggt
ccattgcctgactggttttggtcagcgtgtcctcaagcacaaaatcagtgtcccttgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgt
ctcccaattcattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
DBGET
integrated database retrieval system
