Ficedula albicollis (collared flycatcher): 101809860
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Entry
101809860 CDS
T02815
Symbol
TRPC1
Name
(RefSeq) transient receptor potential cation channel subfamily C member 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101809860 (TRPC1)
Ion channels [BR:
fab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101809860 (TRPC1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
101809860
NCBI-ProteinID:
XP_016156008
UniProt:
U3JX68
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Position
9:11527091..11545963
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AA seq
732 aa
AA seq
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MVKKLLEENSSGEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSE
VVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQ
DISLPKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELS
ADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLL
EERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFW
PVLSLCYLLAPKSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALE
RIDYLLIIWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFH
DYAERKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFL
GMFLLVLFSFTIGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSL
AHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWK
FARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGRVKRQNSLKEWR
NLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGF
RTSKYAMFYPRN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaaactcttagaggaaaacagctccggtgaaatgaacataaattgtgtggat
gtgcttggacgaaatgctgttaccataaccattgaaaatgaaaacttggacatactacag
ctgcttttggattatggttgccagtcctcagatgcacttttggtggctattgactcagaa
gtggtgggagctgttgacattcttcttaatcaccgaccaaaacgatcctccagaccaacc
attgtgaaattaatggaacgcattcagaacccagagtactcaacaaccatggatgtggca
ccagtaattttagctgctcatcgtaacaactatgaaattctcaccatgctgttgaagcaa
gacatatcattacccaaacctcatgctgtgggctgtgagtgcacactgtgcactgccaag
aacaaaaaagatagtctgcgacattccaggtttcgtcttgacatttatcggtgtttggcc
agtcctgccttaataatgttgacagaggaggatccaatcctaagagcttttgaacttagt
gcagacttgaaagaattaagccttgttgaggttgagttcagaaatgattatgaggagcta
gctcaacagtgcaaaacctttgctaaagatttacttgcacaagcacggaattcccgggag
ctggaagtgattctgaatcacacctccagtgatgaacatgtagacaagcgaggattgttg
gaagagaggatgaacttaagccgcttaaaacttgcaatcaagtataatcaaaaagagttt
gttgcccagtctaactgccagcagtttctgaacacggtgtggttcgggcagatggccggc
tatcggcgcaagcacacctgcaagaagatcctgactgttctgatggtcggcattttctgg
ccagttctgtccctgtgttacttgttagctcctaaatctcgagtaggtcgaataattcac
actccttttatgaagtttattattcatggagcttcatatttcacatttctgttattactt
aatttgtactcgcttgtctacaatgagaataagaagaatacaatgggaccagcccttgag
agaatagactatcttctgataatatggcttattggcatggtgtggtcagatgttaagagg
ctctggtatgatggtttggaagacttcttagaagaatcccgcaatcagctcagttttgtc
atgaattctctgtatttggcaacttttgccctcaaagttgttgcccataacaagtttcat
gattatgctgaaaggaaggactgggatgcatttcatcctaccctagtggccgaaggtctt
tttgcctttgccaatgttcttagttacctgcgtctcttcttcatgtacaccaccagctcc
attctggggccactccagatttcaatggggcagatgctacaagattttggaaaatttctg
ggcatgtttcttcttgtcttgttctcattcacaattggattgacccaactttatgacaaa
ggatttactgtaaatgaagaaaaggactgtgcgggcattttctgtgaacaacagagcaat
gacacgttccattcgtttattgggacgtgttttgctctcttctggtacatattctccctg
gcacatgtcgcaatctttgtgacacgttttagctacggtgaagaattgcagtcttttgtg
ggtgccgttattgttgggacctacaacgtggtggttgtgatagtattaactaaactcctc
gtggcaatgcttcacaaaagtttccagctgatagcaaatcatgaagataaggagtggaag
tttgctcgtgccaagctttggcttagctactttgatgataaatgcacactccctccacct
tttaatgttataccctctcccaagactatttgttaccttttcaacagtctcagtaaatgg
atctgctctcatacctcaagtggcagagtgaaacgtcagaacagcctcaaggaatggaga
aatctgaagcagaagagagatgagaattatcaaaaggtgatgtgttgcttagtccaccgt
tacttgacttccatgagacagaagatgcagagtacggatcaggccactgtggaaaacctc
aatgaactgcggcaggatttgtcaaagttccggaacgaaatgcgagacctgcttggcttt
cgaacttctaaatatgctatgttttatccaagaaactaa
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