Ficedula albicollis (collared flycatcher): 101809909
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Entry
101809909 CDS
T02815
Symbol
ATG13
Name
(RefSeq) autophagy related 13
KO
K08331
autophagy-related protein 13
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04136
Autophagy - other
fab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101809909 (ATG13)
04136 Autophagy - other
101809909 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101809909 (ATG13)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101809909 (ATG13)
Membrane trafficking [BR:
fab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101809909 (ATG13)
Atg1 complex
101809909 (ATG13)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101809909 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101809909
NCBI-ProteinID:
XP_005047133
LinkDB
All DBs
Position
5:complement(24340592..24367773)
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AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPSVPSQPAHGTQADQERM
CTPLDGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPVNQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPESPEMESPLQGSLHSEGSSGSSTGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccgc
tcatcatcctccccaacaggttctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctgcccgctgttggacggtctatg
tgcgtggagatttctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ttagaaatgaatgagaagtgtgacaaagaaatcaaagtttcatacactgtatacaacagg
ctgtctctactgctgaagtctttgcttgctataaccagagtaactccagcctacagactc
tcaaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtccag
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattataattgatcactttgtggaccgtccctat
cccagctcttcacccatgcatccctgcaattacagagctggtgaggacaatggtgcagtg
tacccctcagtagaagattcccaagaagtgtgcaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatgggactggccttttcacatcaactttccagctctcgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggcttgaatgctgcacaccctcaccagttgattggtccaggcaaagaaggg
ggagttccctcagttcctagccagccagcacatggcactcaagctgaccaagagaggatg
tgcaccccactggatggagtccattactcagcagctactccttctagcagcgaggacaca
gaaacagtatccaacagcagtgaaggaaagtgtggctccccacatgaccttttggagacc
atctttatccggaaggttggagcttttgtcaacaaacccgttaaccaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgaatccccagaaatggaatctcctctacaaggcagcttacac
tcggagggctccagtggcagcagcacagggaacacccatgatgactttgtcatgattgac
tttaaaccagcattttcaaaagatgacattcttccaatggacctggggacattttaccgt
gaatttcagaacccccctcaactcagcagcctctccattgacattggagcacagtccatg
gcagaggatttggactcgttaccagagaagctggcagtccacgagaaaaacgtcaaagaa
tttgatgcttttgtggaaaccttgcagtga
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