Ficedula albicollis (collared flycatcher): 101810040
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Entry
101810040 CDS
T02815
Symbol
NBN
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03440
Homologous recombination
fab04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101810040 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101810040 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fab03032
]
101810040 (NBN)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101810040 (NBN)
DNA replication proteins [BR:
fab03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101810040 (NBN)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101810040 (NBN)
BRCA1-C complex
101810040 (NBN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
PTCB-BRCT
C_LFY_FLO
Motif
Other DBs
NCBI-GeneID:
101810040
NCBI-ProteinID:
XP_016151603
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All DBs
Position
2:complement(131525333..131546671)
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AA seq
783 aa
AA seq
DB search
MIISAQFMFGKLFARVDNWNLSLLTHTHEEAFLIPVTSGEPYRLLSGVEYVVGRKNCTIL
IQDDQSISRSHAVLTVSQSETSPSQSLSVPVLTVRDTSKYGTFVNGSKLNGTSVSLQSGD
RINFGVFESKFRVEYEPLVVCSSCLDVAQKNALNQAIQQLGGRVVNEWTQECTHLVMISV
KVTVKTICALICARPIIKPEFFSELIRAIQSRQQLPNHESFYPPVDEPSIGTESLDLSEH
HERKKIFSGKTFVFLTAKQHKKLGPAVTLGGGKVKLVTEGRKEMPLLLSPGVCVVDVGLT
NSQLSGSDSVTNRTDSILTVLESKNLRAIPEAEIGLAVIFMSTEKYCNPQKQPASKAVPE
SSSAGAAGGRAISQSLAVDETVMPTAADSSTLCIADTEEQTCMEIENTSQVQRQKKMAFQ
GTTAVKKNSGTSGSVNAGTSAPRGSRTSEFSQRSQPVSPSKSSEAGKPCASASRHQPNSI
TNYFQVSRKRERAEEGETSVPKLAKLEERSSPLPKRTESTTSSICNSEAKQHQKENNILD
PNPNFAEDMSIKLMRENAKLTSGRRDTKTTSGESHAPKKRKELDDLSEDTEALEIVFGSG
DIDWGDQMADQDQEAQRNKRRKCLEAKGGRIQEVNVNQQEENKKEEELESLLTSETKNNI
KQESQVLNHSKLEDDCSNLPSRLLLTEFRSLVVSHPRQNSHLPGNTSYGGKKNFKMFKKV
AYPGAGQLPCIIGGSDLIAYNAKKNSELEDWLRQELEEQDRRTREESLADDLFRYDPNVK
RRR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatcatatctgcacagttcatgtttggaaagttatttgccagggttgataactggaat
ttgtctctacttactcatactcacgaagaagcatttttgattccggtgaccagtggagag
ccgtatcggcttttaagtggtgtagagtatgttgttggacgcaagaactgcacaatttta
attcaggatgatcagtctatcagccgaagccacgcagttctgactgtaagccagtctgaa
acaagccctagtcagtctctctcagtacctgtattaacagtaagagatacatccaagtat
ggtacctttgttaatggatcaaaactcaatggtacttcagtgtctttgcagtctggtgac
agaatcaactttggcgtctttgagagcaagtttagagtggaatatgagcctttggttgtc
tgttcctcatgtttagatgtagctcagaaaaatgctttaaatcaagccatccagcagctg
ggaggccgtgtagtgaatgaatggacacaagagtgtacccaccttgtaatgatatcagta
aaagttactgttaagactatatgtgctttgatttgtgctcgaccaattataaaaccagag
tttttttctgaattaattagagctattcagtccaggcaacagttgccaaatcatgaaagc
ttctatcctccagttgatgagccttccattggcactgaaagcctggatttatctgagcat
catgaaaggaaaaaaatattcagtggaaaaacttttgtatttctaactgccaagcagcac
aagaagctgggcccagcagttacacttggaggagggaaagtaaagttggtgacagaagga
agaaaagaaatgcctttactactttctcctggagtttgtgtagttgatgtgggtttgaca
aactctcagctctcaggatctgactctgtgacaaacaggactgattccattctgactgtc
ttggaaagcaagaatcttagggctattccagaggcagaaattggattggcagttatcttc
atgtctacagaaaaatactgcaaccctcaaaagcagcctgcttccaaagctgtacctgaa
agttcttctgccggagctgctggaggccgagccatttcccagagtctggctgtggatgaa
accgtaatgccaacagctgcagatagcagcaccttatgcatagctgatacagaagagcag
acatgtatggagatagagaatacttcccaggtgcaaagacaaaagaaaatggctttccag
ggtacaactgctgtgaagaaaaacagtggcacaagtggcagtgtaaatgcaggaacatca
gcacctagagggagcagaacatctgagttcagtcaaagaagtcagcctgtctcaccatct
aaaagctcagaagctggcaaaccttgtgcgagtgcttcacgtcaccaaccaaactcaatt
acaaattacttccaggtttctagaaaaagggaaagagctgaagaaggagaaacatctgta
cccaaactagcaaaattggaggaaaggtcatcaccccttcccaagcgcactgaatccaca
acttcctcaatctgcaacagtgaagcaaagcagcatcaaaaggaaaataacatcctggac
ccaaacccaaattttgcagaagacatgagtataaagcttatgagggaaaatgccaaacta
acaagtggtagaagagacactaaaaccacttctggtgaaagtcatgcaccaaaaaagaga
aaggaattagatgatttatctgaagataccgaagcactagaaatcgtgtttggaagcgga
gacatagactggggagatcaaatggcagatcaggaccaggaagctcaaagaaataaacga
agaaaatgtttggaagccaaaggaggcaggatccaagaagtaaatgtaaatcagcaagag
gagaataaaaaagaagaggaacttgaatcacttctaacgtcagaaacgaaaaataatatc
aagcaagagtcacaagtcttgaaccacagcaaactggaagatgactgcagcaatcttcct
agcaggcttttgttgacagagtttagatcactggttgtcagccatccaagacagaacagt
catcttcctggaaataccagctatgggggaaagaaaaatttcaaaatgttcaaaaaggta
gcttaccctggggcaggacaacttccatgcattattggaggatcagatttgattgcttac
aatgctaaaaagaattcagagctagaagactggttaaggcaagaattggaggaacaagac
agacgtacaagagaagaatcacttgctgatgatctctttagatatgatcctaatgtgaaa
agaagaagataa
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