Ficedula albicollis (collared flycatcher): 101810174
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Entry
101810174 CDS
T02815
Symbol
RLIM
Name
(RefSeq) ring finger protein, LIM domain interacting
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101810174 (RLIM)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101810174 (RLIM)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101810174 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101810174
NCBI-ProteinID:
XP_005046028
LinkDB
All DBs
Position
4A:18872366..18885617
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AA seq
612 aa
AA seq
DB search
MLRQEQSKHSSTLLVTKMESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEED
YRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLN
SVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNANPETENEPSVEPS
NGEDLENSQSDSEIPRSESPSVRQPGSERSSAEELAAEEASPPRGQRRARSRSPEQRRTR
ARTDRSRSPINAVGEAPRRSQHSTSSQTPEHSSAGEAEGSSRTRQHVTLRQHAAGTEVPS
ENAVLFAPPETRPAPQAAGSSESSGAGEPAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIA
NRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSV
AIQTMLRQIMTGFGELSYFMYSDSDADPGAPAPSPNVEAAEPQGGAGGASGGEGADVSSG
EVYEGGHEAGSTSGARREGRNMRGSVTFEENSSLPFLSLAQFFLLNEDDDDQPRGLTKEQ
IDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR
AVLASGNRESVV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcaggagcagtctaaacattccagtactcttctagttaccaagatggaaagc
tcagattctagtgataaaggaagtattgatcaatcagaagcccaacgtcagagccagctg
gatcggttagatcgagaagaagctttctatcagtttgtgaacaacctgagtgaagaggac
tacaggcttatgagagataacaatttgctaggaacaccaggtgaaattactgaagaagag
ttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagtgatgagaat
agaggtgcagagtccgcagaagatgtttcaaatggagattctataatagactggcttaat
tcagtccgacagactggaaatacaacgcgaagcgggcagcgaggaaaccagtcctggaga
gcagtgagccggactaaccccaatagtggcgacttcagattcagtttggaaataaatgtc
aaccggaataatgggaacgcgaatccagaaactgagaacgagccatctgtagagccttcc
aatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtctgaatcaccg
tctgtgaggcagcctggatcagaaaggagcagtgcggaggagctggcggccgaggaggct
tcccctcctagagggcagaggagagccaggagcaggagtccagagcagcgacggacgcgg
gctaggactgatagaagtaggtcacccattaatgcagtgggcgaggcccctcgcaggtct
cagcacagcacatcatctcaaacacctgagcactcctcagcgggcgaggctgagggcagc
tctaggaccaggcagcacgtgacgttaaggcagcacgcggcggggactgaggtgccaagt
gagaatgcagttctgtttgccccccccgaaacgaggcctgctcctcaagcagcaggttct
tcagaaagcagcggcgccggcgagcccgcggctcccgggcagaggcctccaaccatagtg
ctggacctgcaggtgagaagagttcgcccgggcgagtaccggcagagggacagcatcgcc
aacaggacccgctcccgctcgcagacccccaacaacacggtcacctacgagagcgagcgc
ggcggcttccggcgcaccttctcccgctcggagcgcgccggcgtcaggacgtacgtcagc
accatcaggatccccatccgccgcatcctcaacacgggcctgagcgagaccacgtcggtc
gccatccagaccatgctgaggcagatcatgacgggcttcggggagctcagctacttcatg
tacagcgacagcgacgcggatcccggcgcgccggcgcccagccccaacgtggaggctgcc
gagccgcagggcggcgcagggggcgcctcgggcggcgagggtgcagatgttagctcaggg
gaggtgtacgagggtgggcacgaggctggctcgacatctggtgccaggagggaaggcagg
aatatgaggggatcggtcacttttgaagaaaacagttctctaccattccttagcctcgca
caatttttcctactcaacgaagacgacgacgaccaacccagaggactcaccaaagaacaa
attgacaacttagccatgaggaatttcggcgagagcgacgctctgaaaacctgcagcgtg
tgcatcacggagtacacggagggcaacaagctgcgcaagctgccctgctcgcacgagtac
cacgtgcactgcatcgaccgctggctgtcggagaactccacctgccccatctgccgcaga
gccgtcctcgcctctggcaacagggagagcgtggtgtga
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