Ficedula albicollis (collared flycatcher): 101810195
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Entry
101810195 CDS
T02815
Symbol
LHX5
Name
(RefSeq) LIM homeobox 5
KO
K18493
LIM homeobox protein 5
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101810195 (LHX5)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
101810195 (LHX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
ARM_UBR_1_2_3
Motif
Other DBs
NCBI-GeneID:
101810195
NCBI-ProteinID:
XP_005054938
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All DBs
Position
15:10491484..10499257
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AA seq
405 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKTLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR
MKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFP
HGPPSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYTDMISHPDTPSPEPGM
TGSLHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNPELSEAAVW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccgcttcctactgaacgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctgacc
gagaaatgcttctccagggaagggaaactctactgcaaaaatgactttttcaggaggttt
ggtaccaaatgcgccggctgctcccaagggatctctcccagcgacctcgtccgaaaagcc
cggaataaagtctttcacctgaactgtttcacctgcatggtctgcaacaagcagctctcc
acgggcgaggaactctatatcatcgacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggcagcctcaactcagtgtcctcatgtacagacaggagt
ttgtccccggatctccaggaccccatgcaggacgacaccaaggaaacggacaactcgacc
tcctcggacaaggagaccaccaacaacgagaacgaggagcagaactcgggcaccaagcgg
agggggccccgcaccaccattaaagccaagcagctggagaccctcaaaaccctcaaagcc
gccttcgccgccacccccaaacccactcgccacatccgggagcagctggcccaggagacc
ggcctcaacatgagagtcatccaggtgtggttccagaaccgtcggtcgaaggagcggcgg
atgaagcagctgagcgcgctgggcgcccggcggcacgcgttcttccgcagcccccgcagg
atgcggcccctcggcggccgcctcgacgagtccgagatgctcggctccacgccctacacc
tactacggagattaccaaggtgactactacgggccaggaggcaactatgactttttcccc
cacgggccgccctcccaagcccagtccccggccgactccagctaccttcagaactcagga
cccggctccacacccctgggacccttggagccccccctaagcggacaccactcctcagaa
aaccaaaggtacacggatatgatctcgcaccccgacacccccagccccgagccggggatg
acgggctctctgcaccccattccgggggaggtcttcagcggggggcccagcccgcccttc
tccatgtccagcaatagcggctacagcggcgctctgtcgcaccccaacccggagctcagc
gaggcggcggtctggtag
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