Ficedula albicollis (collared flycatcher): 101810225
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Entry
101810225 CDS
T02815
Symbol
RB1CC1
Name
(RefSeq) RB1 inducible coiled-coil 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101810225 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fab01009
]
101810225 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101810225 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101810225 (RB1CC1)
Protein phosphatases and associated proteins [BR:
fab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101810225 (RB1CC1)
Membrane trafficking [BR:
fab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101810225 (RB1CC1)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101810225 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Lant_leader_dom
HI_1622_C
Motif
Other DBs
NCBI-GeneID:
101810225
NCBI-ProteinID:
XP_005042120
UniProt:
U3K6I0
LinkDB
All DBs
Position
2:complement(116039220..116094743)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGTESEGTEDGKSA
ELVLYPDVSKVNSKSMLASFCKSVEHSALEGTEPEKVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TPGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLSVRVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKALNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQSSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLNKENQHRLEQMQESHELVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQIDKETESLRKEIDELNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELSKVTLLHQKTAEAEKRLSEQITELRSKLELETSALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNHEQDRQLLIQKLSCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYLAAVSEACGACAADVPTDTDRLVADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaaccaagtataagattgccatt
cagcaccaagtactggttgtcaatggtggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaggattgt
acatactcttaccaaaagctgctttacaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagatacctctgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gaatcttcacctgaacatggaggaacagaaagtgaaggaactgaggatggaaaatctgct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttggcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagagcctgaaaaagtaaaagatgat
aaggaatctggtcaaaatgctactgttcaagacaatgagatgtcggtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaaatggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggactcgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcg
ttgagtgacttgcagtttttgcagtctttctgcccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagccaagcatcgccacaatctgctaccacaccaaggatggaaagt
actccaggaactgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcacacgttcgattttgaaactattgcccatccgaatttggagcaagctcttaag
caaggatcattagacttggattcattagcagagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagagaatccagtgtctcctaatgtaataagtgacccacag
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagt
gttcgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggcata
aaagaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacgattgaaaaggtaaaactttcactt
gaaaaagcactaaatgataaacatcaaaatgaattgcagtctttgaaaagtgagtatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggggatctcttaggccttgaggaagttcttcagaataaaaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaagttctgaaatcaaggaactgaggcagtcacgt
gaaatagtacttgaagacttgaaaaaacttcatgttgaaaataacgagaaactgcaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaactta
caagccaggcatttacaggagtttgagaaggtcttagctgagcacaaggactgtttggat
aaattaaataaagagaaccagcatagacttgaacaaatgcaggaatctcatgaattagtt
atgcaagaaaaacaacaacaagtagaagagttacaactcaaagtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcagattgacaag
gaaactgaaagcttaagaaaggagatagatgaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaatagatatgaagaagaatcaaatttgcttagaactgaatta
agtaaagtaactcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactgcgaagtaagttagagttggaaacgagtgccctagagaaggaaaaaaca
gaaaaattatctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttagtatctaaccacgaacaagacaggcagttgctcattcagaag
ctcagttgtgaaaaagaggatgcagtgcaaactgcttgtaaagagttggagttgcagagg
gaagctgctgaaaaagggcttttggaaaaaatactacaacttgagatgcaagtgaatcag
agtcctcctgctgaatcatctgctgaatcaaacttagttgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacgtcactcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagagaaagataaggatttgattgaaacactttctgaagatcga
gctcgcttacttgaagagaagaagaagcttgaagaagaagttaataagctgagaagtagt
aatttttctccatcaacctacttggcagcagtgtcagaagcttgtggagcctgtgcagct
gatgtgcccactgacacagacagattggttgctgactttggggctgaagggagaatggac
tccacgatggaaaccagtatgatggccgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgttagaaagaactttgcagttgaaagaggaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcatcagtatcctcaaggcattctgaaaaaata
gcaattagagattttcaggttggcgatttggttctcatcatcttggacgaaaggcatgac
aactacgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgct
gcattggatctcaaaccaggtgagtgtgcatcgggtgcatctaggagaccttgggtgcta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
