Ficedula albicollis (collared flycatcher): 101810226
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Entry
101810226 CDS
T02815
Symbol
CHD7
Name
(RefSeq) chromodomain helicase DNA binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101810226 (CHD7)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101810226 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
101810226
NCBI-ProteinID:
XP_005042210
LinkDB
All DBs
Position
2:119145178..119286537
Genome browser
AA seq
3012 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPALQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHSSAAG
GQMGVYPGMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQPQPTQPPQAPSGP
PGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLS
HVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSN
SGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPG
SAGMPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMR
PNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHH
QPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQP
QQKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEDKKKKKKPKAKKEPK
DPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASSKKQDSEAGAGKKKVNKG
KEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAA
GRDSPSNTSQSEQQESADAEGPIVEKIMSSRLVKKKMENGEEVEVEEFYVKYKNFSYLHC
QWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDNG
EPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSES
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFH
AIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPTTKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKV
LLRVRMLYYLRQEVIGDQADKILEGADSSEVDIWIPEPFHAEVPADWWDKEADKSLLIGV
FKHGYEKYNSMRADSTLCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYK
PTRTPFKDEIDEFANSPPEDKEESIELHTNKHSESNAELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVS
TFGVIFDPVKHQFEWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDL
STLIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKD
LLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGSVNTVSSVNPLGAGCSQTPPI
VPSTPVQEEKTTEQTESKVEGSENPAAKEKSEIKEETDTTDKDTKPDCDAEAEPGSVKCE
LKDIEMSTDVDPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSQGKNFDEESIASMS
TARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDLTASPQLSKEDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSN
FSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRK
NVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDG
TRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPE
SMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLN
NPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAA
TAATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALA
GLQNAVGSNEEKATDKTEGAAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLD
GGEEIENNENDE
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtcttggagaatgtggatatcctgaaaatacagtgaatcctatgggtcagcaa
atgcccatggatcaaggatttcccgctttacagtcatctcttcatcatcctcctgcaaat
caaaaccaagccaagttgacccattttgatcactataaccaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatagcgtct
cctcattcgcagtatcacaaccctccggttcctcaggttcctcacagcagcgctgctggt
ggtcagatgggagtctatcccggcatgcagaacgagagacacgggcaacccttcgtagac
agtggctccatgtggggaccacgggcagttcaagtgccagaccagataagagcaccgtac
cagcagcaacagcagcagcagccacaaccgacacagccgccacaggcaccctccggaccc
cctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgat
ttttcaatgcagcagcacggccagccgcagcagcagaggatgaaccagttttctcaaggc
caagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtct
catgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaattt
caccaccatccccctactgctctccatggggaatcagtagcccacagtcccagattctcc
cctaatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcggagc
cagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagt
aaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaat
aacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatcaaac
agtggtcaaggactaatgcaccagcagcccatccaccctagtggctcacttaaccaaatg
aacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatg
tcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacctggt
agtgctggaatgccaatggaagttggcagttacccaaatataccccatcctcagccgtca
caccagccccctggtgccatgggaattggacaaaggaatatgggccccagaaacatgcag
cagaatcgtccatttatgggtatgtcttcaacaccacgggagatgggtgggcacatgaga
ccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagaacgactaata
tctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcct
cccatgcagcctcatccagggatacatcatcagtcttcaccacccccacatcctcatcat
cagccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtcctt
cagcattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggttagt
ggaccgaatacccagctagtgaaaagcgatgattatctgccgtcaattgagccgcagcca
cagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaggt
tttggtaaggaagactttcctgggggacttgacagccagaatctaagtagaaactcagtg
gattgctcccaagaagacaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaag
gatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacccct
aaagagccaaaggaaaagaaagcaaaaaatacaacgccaaaacccaagaccagcaaaaag
gctagcagcaagaagcaagattcagaagctggtgctgggaagaaaaaggttaacaaggga
aaggaaggttctgaaaactcagatttggaaaaaactccaccaccatcacctcatcctgaa
gatgaagatgatccaggagttcagaaacgacgctccagcaggcaggtgaagaggaagcgt
tatactgaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgctgct
ggaagagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgctgaa
ggtcccattgtggagaaaatcatgagtagccgtttagtcaagaaaaagatggagaatgga
gaggaagtagaagtagaggaattctatgtaaagtacaaaaacttttcttaccttcactgt
cagtgggcatcagtggaagagctggacaaagacaagagaattcagcagaagattaagcgg
tttaaggcaaaacagggccagaataaattcctttctgaaattgatgatgagctttttaat
ccagattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgacaatgga
gagcctgtaacgcattatctggtgaagtggtgttcgcttccttatgaagacagcacttgg
gagctcaagcaagacatcgaccaagccaagatcgaagaatttgagaaactgatgtctagg
gagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagt
tccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactgg
cttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttggga
aagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcct
ttcttggttattgcaccattgtccacaattcccaactgggaaagggagttccgcacctgg
acagagttgaatgtggttgtgtatcatgggagtcaagcgagtcggcggaccattcagttg
tatgaaatgtatttcaaagatccacagggtcgtgtgatcaaggggtcctacaagttccat
gccattatcacgacatttgaaatgatcttgactgactgcccagagctgcgtaacattcca
tggcgttgcgtggtcattgatgaggcccacaggctgaaaaacaggaactgcaagcttttg
gaaggactcaagatgatggatctggagcataaagtgctgcttactggaacccctttgcaa
aatacagtggaagagctgtttagcttgcttcacttcttggaaccaggtcgttttccatca
gaaaccacattcatgcaagaatttggggatcttaaaactgaagagcaggtgcaaaaattg
caagctattttgaagccgatgatgctgagacgtctcaaggaggatgtggaaaagaacctg
gcccccaaagaggaaaccatcattgaagttgagctgacaaacattcagaagaaatattat
cgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaatgta
cctaatcttttaaacactatgatggaactaaggaaatgctgcaatcatccataccttatt
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctcca
gattttcagctccaggcaatgatccaggctgctggcaagctcgtactgattgacaagctg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactggaagactacctcattcaaagacggtacccatatgaacgaattgatggt
cgagtgagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgat
aggtttgttttcctgctgtgcacaagggcaggaggtttgggcattaatcttactgctgct
gatacctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagca
cgatgtcacagaatagggcagagcaaatcagtgaaaatatacaggttgataacaagaaat
tcttatgaaagggaaatgtttgacaaagctagcttgaagctgggccttgataaggctgtg
ctacaatctatgagtggaagagaaaatgccacaaatggggtgcaacagctgtctaaaaaa
gaaatagaagatctgctccgaaagggggcatatggtgctctgatggatgaggaagatgaa
gggtctaaattttgtgaagaggacatcgatcagattctcttaaggcgaacacacacaatt
actattgaatctgaaggaaaaggctcaacatttgccaaggctagttttgttgcatctggg
aacaggacagacatttctttggatgaccctaatttctggcagaagtgggcaaagaaagct
gagctggatattgatgctctaaatggaaggaacaacctagttattgatacaccaagagta
aggaagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttcagac
ctggaaagcgattctgaagaaaagcctaccacaaagccccgtaggcctcaggacaaatca
caaggttatgcaagaagtgaatgtttcagggtggagaagaacttgttagtttatggctgg
ggccggtggactgacatcctctcacatgggcgctataaacgtcagctaacagagcaagat
gtggaaaccatctgccggactatcctggtgtattgtcttaatcattacaaaggggatgaa
aatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagct
ttggttaatcattccggtctgtctgcaccagtgcccagagggagaaaagggaagaaagta
aaagcccagagttcacagccaatgctgcaagatgctgattggctcacaacctgtaatcca
gatgtattatttcaagaagacagctataggaaacatctcaaacatcactgtaataaggtc
ctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagac
aagatcttagagggtgctgactcaagtgaagtagatatatggatacctgagccattccat
gctgaagttcctgcagactggtgggataaggaggcagataaatcccttttaattggagta
tttaaacacggttatgagaagtacaattctatgagagctgattcaacactgtgctttcta
gaacgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagacatg
ttagcagatggcggtgatgggggtgaatttgacagagaggatgaagatccagaatataag
ccaaccagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagac
aaagaagagtccatagaattacacacaaacaagcacagtgaaagcaacgccgagttaggg
caactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgc
aggagacgtcggcctcgagaagaagtgagagcactggaggcagaaagggaagctataata
actgagaaacgacaaaaatggacaagaagagaagaagccgatttttatcgtgtggtgtct
acttttggagttatttttgatcctgtaaaacatcagtttgaatggaaccaattcagagca
tttgccaggcttgacaaaaagtccgatgaaagcttggaaaagtattttaatggctttgtg
aatatgtgtagacgagtgtgccgaatgccagtcaaaccagatgatgaacctccggatctc
tccacgctgattgagcccatcacagaggagcgcgcttctagaacgttatatcgcatcgag
ctgctgcgcaagatccgggaacaggttctccatcacccgcagctgggggagaggttaaag
ctttgccagccaagtctggacctgccagagtggtgggagtgtggtaaacatgataaagac
ttgctgattggtgctgctaaacatggagtcagtaggacagattatcacattctcaatgat
cctgaactctcttttcttgaggctcacaaaaactttgcccaaaacagagggacaggtagc
gtaaatactgtctcctctgtaaaccctctgggtgctggctgcagtcaaacacccccaatt
gtcccttccacaccagtacaagaagaaaagactacagaacaaacagagtctaaagttgaa
gggtctgaaaatccagcagccaaagaaaagtctgaaatcaaagaagagacagatactaca
gataaggacactaaaccagactgtgatgctgaggctgagcctggctctgttaaatgtgaa
ttgaaagacatagaaatgagtacagatgtagatccaaaatctatttctgagaaaggttca
gaagaagatgaagaggagaaactggaagatgatgataaatcagaagaatcctcccaacct
gaagcaggagcagtttctcagggtaagaattttgatgaagaaagcattgcctctatgagt
actgcaagggatgaaacacgtgatggattttacatggaagacggggatccctctgtggtt
cagctgcttcatgagagaacatttgccttctcattctggcctaaggaccgagtaatgatc
aaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgc
cagatgtttgatttccaggggctcatacctgggtacactccaacagctgtggacagccct
ctacagaaaaggagctttgcagagctctccatggttggtcaagccagcgtcagtggcagt
gaagatctcactgcttctcctcagttatcaaaggaagatgcactcaatttatcagttcca
cgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaagagg
agaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatgga
caagaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaat
ttttcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgcc
tttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatcta
ctaaatggctctttaatagatggagaaccacccatgaagaggaggagaggaagaaggaaa
aatgtagaagggcttgatctgttatttatgagcaacaaacggacatcgttgactgtagag
gatgctgaagtgaccaaagcttttgaagaagatatggaagccctaccagcaaggaacatt
ccatctcctggtcaattagacccagacactcgcatccctgtaatcaatctagaggatggg
accaggctggtgggagaggatgccccgaaaaacaaggatctagttgaatggcttaagttg
catcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttt
tccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggat
ataaacaccttgacaggagaagaaagggtacctgttgtaaataaacgaaatggaaagaag
atgggtggagctatggcccctccaatgaaggatttgccaagatggctggaagaaaatcct
gagtttgctgttgctccagattggactgacattgttaagcagtctggtttcgtaccagag
tccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaaga
ggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatca
acttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcacaagc
ctccagaacctacagaacctgcagtctctccagctcgcaggcctcatgggctttccacca
gggctagcaacagctgccgctgctgggggggacgctaaaaatccggctgccatgttgcct
ctgatgttgccagggatggcaggactgcccaatatgtttggactaagcggattgttgaat
aacccgataacggctactactggaaatgccactactgcttccggtcagggagagactgag
gatggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagactct
gagaaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgct
actgcggcgactaccgccactgccaccactaccaccaccaccaacactggattgcccaca
aaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctatcca
tctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcactagca
ggacttcagaatgcagtgggctccaatgaagagaaggctactgacaaaactgaaggagct
gcctttaaagatgaagaaaatctcgaaggcagcgatgcagaggagagccttgataaaact
gcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcacttgat
gggggggaagaaatagaaaacaatgaaaacgatgaataa
DBGET
integrated database retrieval system
