Ficedula albicollis (collared flycatcher): 101810407
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Entry
101810407 CDS
T02815
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101810407 (TRAPPC8)
Membrane trafficking [BR:
fab04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101810407 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
101810407
NCBI-ProteinID:
XP_016152221
LinkDB
All DBs
Position
2:complement(112125227..112181573)
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AA seq
1426 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRRNNLSFAELVRPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIRKLLHDVVSVSQPAEGLVANVITAGDYDLNISATT
PWFESYRECFLQSMPASDHEFLNHYVACMLVVSSSEPDPVEQFLKLSQEQHRIQHSNEYS
YPKWFIPNTLKYYVLLHDVSTGEEQRADSIYEEMKQRYGTQGCYLLKINSRVSNRGADEQ
IPDPWSQYLQKNTIQNQDSYEDYTVSNKNTDHLISDGTDTEIKDGLSNNFKTHPLQLDHP
SGSLDSTDYMKASTSLQDSKKSNSGTPHGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTI
RQLNDQLISRKGLSRSLFFATKKWFSGSKVPEKSINELKNTSGLLYPPEAPELQIRKMAD
LCFLVQHYELAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMETA
IQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSALLLEQAAHC
FINMKSPMVRKFAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIG
RQSFTLRQLDNAVSAFRHILINDSKQPPAQQGAFLREYLYVYKNATQLSPDGPLPQLPLP
YINSSATRVFFGHDRRPAEGEKQAATHVSLDQEYDSESSQQWKELEEQIVAVINKGTVPS
NFQPTQFCLNRYSDNSKFPLAVIEEPITVEVSFRNPLKVPLLLTDLSLLWKFQPKDFSAK
HDGETKEQGTCDEDMVGTEAIAEFLINSEETKVARLKLFPHQTGELHILGVVYNLGSVQG
AVSLDGIDPSIGLQTGKFVSNGLSVRGRQDLEIQGPRLNNTKEEKTSIKYGPDRRLDPII
TEEMPLLEVFFINFPTGLLCGEIRKAYVEFVNVSKCPLTALKVVSKHPEFFTFGGNTAAL
TPLSPSASENCSAYKTVVTDPTSVRTALLSSASSADFGVGMGGSPEVIQVPLPDAVLLPG
ASVQLPMWLRGPDEEGVHEINFLFYYESIKKHSKMCHRVLRHTAVICTSRSLHVRATVCR
SNALGDEEGRGDNMLLFVDVENINTSETGVKEFHIVQVSSNSKHWKLQKSINISGDKDTK
LASRERAKLCFKAVRCKNSEENYTFADIVFGNEQIISSASPCADFFFQSLSSEFKRTQVQ
SHAHASQRAMKQSFDETVRLIQRCSEVDLNIVVLWKAYVVEDSKQLILEGQHHVALNTVG
KEAFSFPQKQELPETVLLKFFRPENTPVPARPTPEQLSNLIKTSLHYPESFNHSFHQKSL
CLVPVTLLLSNCSQAVVDVMIDLRHKPTSSEALEIHGSFTWLGQTQYKLQLKGQEVYSLQ
LKACFVHTGVYNLGTPRVFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcggctcacccgcaggaacaacctcagcttcgcc
gagctggtcaggcccttctgccgcctcacctcggaagttcacatgagagatcctaataat
cagcttcacatcattaaaaatttgaagattgctgtcaacaacatcattactcacccacct
cagcccggtgccattcggaaacttttgcatgatgttgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaacatcagtgctactact
ccttggtttgagtcttacagagagtgctttcttcagtccatgcctgcctctgatcatgaa
ttcttaaaccactatgttgcatgtatgctggtagtttcttctagtgaacctgaccctgtt
gagcagttcctgaagctgtcccaagaacaacaccggattcagcacagcaatgaatactca
tatcccaagtggtttatcccaaacacactcaaatattatgtgttactgcatgatgtaagc
acaggagaggaacaaagagctgactccatttatgaagagatgaaacagagatatggaact
cagggttgctatttgctgaaaataaattctcgggtgtctaatagaggagcagacgagcag
ataccagatccttggagtcagtaccttcagaaaaacactatccaaaaccaggattcctat
gaagattatactgtttcaaacaagaatactgatcacttgatatcagatggcacagacact
gaaattaaagatggcttgtcaaataactttaagactcacccccttcaactggatcatccc
agtggcagtttggatagcactgattacatgaaggcttctacatcactgcaagactcaaag
aagtcaaattctgggacacctcatggtgcttgtttaactctcacagatcacgatcgaatt
aggcagttcatacaggaattcacatttcggggacttttgccacacatagagaaaacaatt
cgacaactcaatgatcagttaatatccaggaagggcttgagccgatcgctgttttttgct
actaaaaaatggtttagtggcagcaaggttccagagaaaagtataaatgaactcaagaat
acttctggtttgctgtatccaccggaagcaccagagcttcaaatccggaaaatggcagat
ttgtgctttttggtgcaacactatgaacttgcatatagctgttaccatacagcaaagaaa
gacttcttaaatgatcaggcaatgctttatgcagctggagcactggaaatggcagcagta
tcagcttttcttcagcctggagctcctaggccatatcctgctcattatatggagacagca
attcagacctatcgagatatctgcaagaacatggttctggctgaacgctgtgtactgctt
agtgctgaaatcttaaaaagtcaaagcaaatattcagaggcagctgctcttctgattcgt
ttaaccagtgaggattcagatcttcgcagtgcactgctgttggagcaggcagcccattgt
tttataaacatgaaaagtcccatggttagaaagtttgcatttcatatgatattggctggc
cacagatttagtaaagcaggccagaagaaacatgccttacgttgctactgtcaagccatg
caggtttacaaagggaaaggctggtcacttgcagaagaccacattaacttcaccatcggt
cgtcagtcctttacgcttcgccagctggacaatgctgtgtctgccttcaggcatattttg
atcaatgacagtaaacaacctccagctcagcaaggggcttttttaagagaatatctttat
gtctataagaatgcaacccagctgtcacctgatggtcccttaccgcagcttcctttacca
tatattaacagctcagcaactcgtgttttctttggccatgatcgaagaccagcagaaggt
gaaaagcaggcagctacacacgtaagcctggatcaggagtatgactcagaatcatcacaa
cagtggaaggagctcgaggagcagattgtggctgtgataaataaaggaacagtaccttca
aactttcaaccaacacagttctgtttaaatcgctactcagataactccaaatttccactt
gctgtgatagaagaaccaataactgtagaagtgtccttccgaaaccctctgaaagttcca
cttcttttgactgacctttcattgctgtggaagtttcagcccaaagacttcagtgcaaag
catgatggagaaacaaaagagcagggtacgtgcgatgaagatatggtaggaactgaagca
atagcagaatttttaattaatagtgaggagaccaaagtggcaagactaaagctctttccc
catcaaacaggggagctacatattctgggagtcgtttataatcttggcagtgttcaaggt
gctgtgtcattagatgggatagatccttctattggattacagacaggcaagtttgtttcc
aatgggttatctgtacgaggacgacaagatttagaaatccaaggacctcgacttaataac
acaaaagaggaaaaaacatcaattaaatatggacctgatcgacgtttagatcccattatt
acagaagaaatgcctttgttggaggtgttctttataaattttcctacagggcttctctgt
ggagaaatcagaaaagcatatgtagaatttgtgaacgtaagcaagtgtcctcttactgca
ctgaaggtcgtgtccaagcatccagaatttttcacttttggtggaaatactgctgctcta
acaccactaagtccttcagcctctgagaactgtagtgcttacaagactgttgtgacagat
cctacctctgtgcgaacagcactgctgtcttcagcttcttctgcagactttggggttggc
atgggaggttcacctgaagtaatacaggttccacttcctgatgctgttcttctccctggg
gcttcagtgcagctgccaatgtggttacggggaccagatgaagaaggtgttcatgaaatt
aacttcttgttttactatgaaagtattaaaaagcactcaaaaatgtgtcatagagtatta
aggcacactgcagttatttgtaccagccggtctctgcacgttcgggctactgtctgcaga
agtaatgcacttggggatgaagaaggcagaggagacaacatgttgctctttgtggatgta
gaaaatatcaatactagtgagacgggtgttaaggaatttcatatagtgcaagtttcaagc
aatagcaagcactggaagcttcaaaaatctattaacatctctggagacaaagatactaaa
ctagctagcagagagagagcgaagttgtgttttaaagcagtgagatgcaaaaactcggaa
gaaaattacacttttgcagatattgtctttggaaatgagcagataataagttcagccagt
ccttgtgcagacttttttttccaaagcttatcctctgaatttaaaagaactcaagtgcaa
tctcatgctcatgcatctcaaagggcaatgaaacaatcatttgatgaaacagtcagattg
atacaaaggtgcagtgaagttgatttgaacattgtggtactgtggaaggcatatgttgtg
gaagacagcaagcagcttatcttggagggccagcatcatgttgcccttaacacagttggg
aaggaggccttttcatttcctcagaagcaggaactaccagaaacggttctcttaaagttt
tttcgaccagaaaacacaccggtgcctgcaagaccaacaccagagcagctttctaatctt
attaagacaagtcttcattatccagagtctttcaatcattcttttcatcaaaaaagcctc
tgtctggtacctgtcactctcctactttccaattgttcccaggctgttgtagatgtgatg
attgatttgaggcataaaccaacaagctccgaagcactagaaatacatggatcttttaca
tggcttgggcaaacacagtacaagcttcagcttaaaggccaggaggtctatagcttgcag
ctcaaggcttgcttcgtccatacaggtgtctataaccttggaacccccagagtatttgcc
aagctcgtggaccaagttactttgtttgaaacaagtcagcagaactctatgcctgcactg
attattatcaataatatctga
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