Ficedula albicollis (collared flycatcher): 101810495
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Entry
101810495 CDS
T02815
Symbol
NR6A1
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1
KO
K08561
germ cell nuclear factor
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101810495 (NR6A1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
fab03310
]
101810495 (NR6A1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
101810495 (NR6A1)
Nuclear receptors [BR:
fab03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
101810495 (NR6A1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7466
Motif
Other DBs
NCBI-GeneID:
101810495
NCBI-ProteinID:
XP_005055787
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Position
17:complement(11277957..11342655)
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AA seq
444 aa
AA seq
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MSSSSPVLPVNSMGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCS
RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIM
SGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYLG
TPVSTHYQYLPHLFGYSSAPSALLAPPRSLEPPSHGLVSQLLCAEDLQPLGTPMLIEDGY
KVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVY
SKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAIN
FLNQDIRGLSNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGKMVN
VPLEQLPLLFKAVLHSCKTSVSKE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctcctctcctgtcctccctgtgaactccatgggcaatgagcgggtggatcag
cgaacctgcctgatctgcggggacagagccacggggctgcactatggcatcatctcctgc
gagggctgcaagggcttcttcaagaggagcatctgcaacaagcgcgtgtaccgctgcagc
cgcgacaagaactgcgtcatgtcccgcaagcagcgcaaccgctgccagtactgccggctg
ctcaagtgcctgcagatgggcatgaaccgcaaagcaatcagggaggatggcatgccagga
ggcagaaacaaaagcatcggacctgtccagatatcagaggaagagattgaaagaattatg
tctgggcaagaatttgagggagaggcaaacatgtcatggagcaacaatggagacagtgac
cacagttcccctggaaatggagtttctgagagcaaccagccttcacctgtttctactcca
tcttcaagtaggtccgtggagctgaacgggttcgctgcactcagggatcagtacctgggc
acgccggtgtccacgcactaccagtacctgccgcacctttttggctactcctcggcgccg
tcggcgctgctggcgccgccgcgcagcctggagccgccgtcgcacgggctggtcagccag
ctgctgtgcgccgaggacctgcagcccctcggcacccccatgctcatcgaggacgggtat
aaagtgactcaggcagagctgtttgcgttgctgtgtcgtctggcggatgaattgcttttc
aggcagattgcttggatcaagaagctgccgttcttctgcgaactctccatcaaggactat
acctgcctgctcagctccacgtggcaggagctgatcctgctctcctcgctgactgtttac
agcaagcagatctttggtgaccttgcagatgtcacctccaagtactctccctctgacgac
gagctgcacaggttcagtgaagaggggatggaggtgatggagcggctgatctacctcttt
cgcaaattcaaccagctgaaggtcagcaacgaggagtacgcgtgcatgaaagccatcaac
ttcctaaaccaagatatcaggggtctgagcaacgcctcgcagctggagcagctgaacaag
cggtactggtacgtgtgccaggacttcacggagtacaaatacccccaccagccaaaccgc
ttcccagacctaatgatgtgtttgccagagattcgctatattgcaggaaaaatggtgaat
gtccccctggagcagctgcctctcctgtttaaggctgttctacattcctgcaagacgagt
gtgagcaaggagtga
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