KEGG   Ficedula albicollis (collared flycatcher): 101810620
Entry
101810620         CDS       T02815                                 
Symbol
COL4A4
Name
(RefSeq) collagen type IV alpha 4 chain
  KO
K06237  collagen type IV alpha
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab04382  Cornified envelope formation
fab04510  Focal adhesion
fab04512  ECM-receptor interaction
fab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:fab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101810620 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101810620 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101810620 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    101810620 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fab04147]
    101810620 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:fab00536]
    101810620 (COL4A4)
Exosome [BR:fab04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101810620 (COL4A4)
Glycosaminoglycan binding proteins [BR:fab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101810620 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101810620
NCBI-ProteinID: XP_005051392
LinkDB
Position
9:complement(10191241..10249665)
AA seq 1681 aa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NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcaactcaaggaactgatgggggaggatatgcatatattgatcca
tgtgggggacaggattgttctgtttgtcggtgctttccagaaaaaggatccaggggtcag
cctggtgagctgggggctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctgccaggggagaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgacaagggcccaactggagtcccaggatttcctggtttagatggtgttcctggcctc
ccaggaagggaaggacccagaggcaagcatggtttggatggctgcaatggctcaagggga
gacccaggacttccaggagaaaacggttatatgggaccaagaggtccttatggaattcaa
gggcaaaaaggagaaaaaggaaattcagtgtatatttcacattttggaaaaggactacca
ggagagagaggtgatcctggtccccctggcatgcctggacctagagggccaagaggtaca
atgggcccatctggatacccaggccatccaggcttgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccagggattggagtagatggacaaaagggggagccgggc
gacatcggactgcctgggccgcctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggacaaaagggccaaaaaggattacctggggtaacaggatacagagggcca
cgtggacccaaaggcatacttgggagaggagaaaagggtgagaaaggccttcctggattc
cctggactgcggggtcatcctggttcttatggacctgcaggttttcctggaatgaagggt
gaaacaggatttgctggttttcctggacaacctggctatccaggcatacagggggatcca
ggagataaagggcccccaggtcctcctggagctgttggaactccactgccttctataaaa
ggtccacgaggagatcctggatttccaggtcctgtgggtgaaatggggtcagttggacca
attggtccttcaggccttctaggaagaccaggatatgatggaacaagtcttcctggcctg
ccaggagtaggtggggcaccaggacctcaaggttttcaaggggaccctggtttgcctgga
acaggtgaattaatcccaggaagaccaggacttcctggaccaccaggcccaccagggcag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgacagagggatccct
ggagaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgctaaaggagag
aagggaagtcaaggcttctgctcatgtagtgctggtcctcctggtccccgtggtgtgcaa
ggacctccaggtgctgaaggaaggaaaggacaaatgggataccctggaagacacggggaa
aagggcgacccaggctcatccggggcagtgggaccaccagggctccctgggactcctggt
tttgctggacagcatggggaaaaaggagagaagggagatcctggaagagttagaataaaa
ggattaaaaggtgaaagaggacctactgggcttcaaggatttccaggccaaagaggtctt
gatggcagagatggggaactaggattgccaggggaaaaaggagctgagggcgattctgga
gtagcagttccgggtgataaaggattccctgggctcccaggaactcctggggtaaaaggc
cagatgggattgcctggtttgggacttcctgggtctccaggagccagaggtagccccgga
gactttggtgatatgggtaatgttgggccacctggtccaaaaggccagaaaggtgaaact
gtctgcattacatcaccatatcctggaaatccaggtcccccggggtttaaaggtgttcaa
ggacagaagggtttaaaaggactccctgggcatcctggaccaactggctttgatgggcaa
aaaggctatcgaggaaggccaggagcaggaatccctggaccagaaggctttcgaggcaca
gctggtgatcctggtgatgaaggtgaaagaggatctacaattgatggcaaaaatggcctt
ccaggtccacctggcatagatggtcagaaaggtcttccaggtgacaccacttatggccct
ccaggaatcccaggcaacaggggactgccaggaccccccggtgcacagggagcaaggggt
aatccaggcattcctggacttcaaggacaacctggcaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgatgtaggagcaccaggctgtccaggcttccctggctca
ccatgtgtcccaggcttaccaggaccacctggactcagaggtgtcatgggcctgccagga
cctcaaggcttaccaggccttaaaggtcagaggggagacaggggcctggctgggccacct
ggaatcaaaggtctcaaaggctctttgggctcacgaggtctcccaggtcctccaggctca
cgaggtcccccaggacttccaggcaataaaggacccattggcttccctggagaaacagga
agcaaaggcattcaaggaccccggggattcccaggactcccaggaatacaaggcccaatg
ggaatctttggtgtaaaaggtgaagaaggaaaaatgggtctacctgggcctactggagaa
tgtggagatatgggaataaaaggtgaaagggggcctccaggagacagcggctgcgtcaac
ctccgtcttgagaaaggacaaatgggggacccagggtttcctggtgagcatggattgaga
ggtgaaagaggtgaaaaaggcaatactggtttcagaggcacacgaggatttccagggaag
aatggtgttccaggactgccaggtgaccaaggtgacactggagtgatggggtttccagga
tcacggggtttgcctggaccaaaaggccttcaaggaattacaggttttcaaggagaacca
ggtgaccagggtgatgttggcttaccaggaaaccctggatatccaggactgattggcccc
aaaggatgtaaaggcaagagaggtgacccaactcctctgcttggtgcacacggtcggaaa
gggcctccaggagatccaggattgccaggatttagtggatttccaggggagaagggttta
ccaggtatccaaggacagcctggaagaccaggatccaagggtgaccctggatatccaggg
ccgcctggattgccaggagctacaggtcctcaaggattgccaggagaacgtggagaagat
gggaaacctggaattttgggacctccaggattgcaagggttgcctggatcccaaggcaga
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaagggt
tctgcaggagctccaggtcagagtgagacagggcccccaggatactcaggagaaattgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaaggggattcccaggatttccaggtagaagaggacctgttggacccactggacctatg
ggaagatctcctgatagtgcttcccctggtcctccaggggatcaaggattacctggttta
gatggaatcagaggtgatcctgggaatcctggtccccctggagagactgtctttgtgcga
ggagatccaggtgatagtggcatgcaaggggcaccaggtaatcctgggccacgaggacaa
cagggagccaggggccctccagggagccaaggaagagaaggcccaaagggtcctatgggg
gtccatggcccacagggtccacctggtgctataggacaaccaggagaccaaggttttcca
ggaagacctggtcccagaggtcccacaggtttcataggtgaccctggtgaaccaggcaaa
gtagatgattcatgccctaaaatcccagggcctcctggggaagcaggacaaagaggagag
gatggctctgcaggattaccagggccaataggccaccctggaccccaaggcataaaaggt
gaagaaggatcatgtggcctgccaggtcaggatgggttacctggggcacctggaccacca
ggggaccaagggagccgaggagagcaaggatatgctgggccacaaggtccacctggccag
actggtgtcccaggacaaccaggcccccaaattagatctgcaagtggattcttgctcgtc
ctgcacagtcagtcagacagagaaccactctgcccacaggggatgccaaggttatggact
ggctatagtctgctgtacctggaaggacaagagaaagcccacaatcaagatcttggtctg
gcaggatcctgcctgcctgtgtttagcaccatgccatttgcctactgcaacatcaaccag
gtgtgttactacgccagccgcaatgacaagtcctactggctgtccagcgccgcgccgctg
cccacggcgccgctggccgaggaggaggtccagccctacatcagcaggtgtgctgtgtgc
gaggccccagcacaggcagtggcactgcacagccaggaccagtccattcctccctgccca
cccaactggaggagcctttggataggatactcttttctgatgcacactggatctggtgac
cagggaggtggacagtcccttatgtcacccggaagctgcctggaagacttcagatcagca
ccattcatcgagtgccagggccagcggggaacgtgtcagttctttgctaatgagtacagt
ttctggctgaccactgtgatgcctgagctgcagtttgcatcagcccccctgtcagggact
cttaaagaaggacaagagcagaggaaaaaaatcagtagatgccaggtatgcctgaagcat
ggctaa

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