Ficedula albicollis (collared flycatcher): 101810627
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Entry
101810627 CDS
T02815
Symbol
THOC3
Name
(RefSeq) THO complex 3
KO
K12880
THO complex subunit 3
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101810627 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
101810627 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101810627 (THOC3)
03041 Spliceosome [BR:
fab03041
]
101810627 (THOC3)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101810627 (THOC3)
Spliceosome [BR:
fab03041
]
Complex C
Other components
EJC/TREX
101810627 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101810627 (THOC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
DSE1_N
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_HPS5
RMC1_N
Tricorn_2nd
NBCH_WD40
TRM82_WD
Beta-prop_ACSF4
B-prop_COPA_B_2nd
PAC11
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
WDR90_beta-prop_4th
PD40
ASA1
Beta-prop_SPT8
Beta-prop_WDR75_1st
Peptidase_S9_N
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_LRRK2
Beta-prop_WDR11_1st
TP_0598_N
YNCE
PROPPIN
Beta-prop_ELP1_1st
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
101810627
NCBI-ProteinID:
XP_005053620
LinkDB
All DBs
Position
13:3392362..3395779
Genome browser
AA seq
326 aa
AA seq
DB search
MAVSPYVQAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDQTASTASVFLLE
KDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENI
NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGC
INILSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRL
DWPVRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFA
CDDKDGKYDSSREAGTVKLFGLPNDS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcgccctacgtgcaggccatgcaggagctgttccgcgccaacacgcgcagc
cgcgagttccccgcgcacggcgccaaggtgcactcggtagcctggagctgctgcggccgc
cgcctcgcctccggttccttcgaccagaccgccagcaccgccagcgtcttcctgctcgag
aaggaccggctggtgaaggagaacaactaccggggccacggggacagcgtggatcagctc
tgctggcaccccagcaaccctgacctcttcgtcacagcgtcaggggacaaaaccatccgc
atctgggacgtccgcaccaccaagtgcattgccactgtcaacaccaaaggtgagaacatc
aacatctgctggagccctgatggacagaccatcgctgtggggaacaaggatgatgtggtc
accttcattgatgccaagactcatcgctccaaagctgaggaacagttcaagtttgaggtg
aacgagatctcctggaacaatgataacaacatgttcttcctcaccaatgggaatggctgc
atcaacatcctcagctacccagagctgaaacccatccagtccatcaacgcccatccttcc
aactgcatctgcatcaagtttgatcccatggggaaatactttgccacaggcagtgctgat
gccttggtcagcctctgggatgtggatgagctggtgtgtgtgaggtgcttctccaggctc
gactggcccgtgcggacactgagctttagccatgatgggaagatgctggcctcagcatca
gaagatcacttcattgacattgccgaggtggagacaggagagaagctctgggaggtgcag
tgtgagtcccccaccttcacagtggcctggcacccgaagaggccgctgctggccttcgcc
tgtgacgacaaagatggcaaatatgacagcagcagggaggctggcactgtcaagctgttt
gggctccccaacgactcctga
DBGET
integrated database retrieval system
