Ficedula albicollis (collared flycatcher): 101810814
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Entry
101810814 CDS
T02815
Symbol
COL4A3
Name
(RefSeq) collagen type IV alpha 3 chain
KO
K06237
collagen type IV alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04510
Focal adhesion
fab04512
ECM-receptor interaction
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101810814 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101810814 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101810814 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fab04147
]
101810814 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
fab00536
]
101810814 (COL4A3)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101810814 (COL4A3)
Glycosaminoglycan binding proteins [BR:
fab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101810814 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101810814
NCBI-ProteinID:
XP_016155928
LinkDB
All DBs
Position
9:10252474..10310651
Genome browser
AA seq
1678 aa
AA seq
DB search
MDYKSIGNTVCVKIPQAFCGWTLSITDTVSMLPLPNCVCKGKSPCFCDSTKGSKGEKGFP
GVPGPPGQRGFPGPEGPPGPQGPKGSPGFTGLVGPKGIRGLPGIPGFSGPPGLPGEPGAV
GPPGLPGVPGCNGTKGDQGFPGPPGRRGAPGLPGVVGIKGEKGCPAEGYSQEYGAKGDPG
LPGMPGLQGAQGAQGYPGELGPQGPPGALGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGL
TGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSLSEKGDQGEPGA
QGKPGKEGAPGPPGLPGQKGEQGKPGLPGRQGAKGMKGNPGPPGACGRTEYYDYVAGEKG
DEGPPGPPGPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGTKGERGQTGLHIV
GPPGLPGITGRPGSVGLPGPPGEPGRVTFGTGLPGFPGEPGCTGPPGPPGDTGMRGDDAG
VCTDCSYIPGMPGLPGSPGPRGQDGMPGREGTTGPKGSPGSPGASGFPGAQGPQGFRGEQ
GRKGSKGEPGYVHPEGPKGERGDPGAMGDKGRRGSSGFMGRPGSKGSKGSKGEEGLAGSK
GDRGLPGLPGRLGLPGEMGLPGLPGYGPQGVRGFKGSKGIRGPPGLPGEAGLKGETSRAT
PLPALPGPQGPHGLPGPPGMPGRVGARGQPGDPGHSGPTGDTGFPGLGFPGNPGPKGDKG
LAGGRGPPGCEGKTGDPGRTGNLGQPGQKGEPGMVIPGEPGRMGSPGGHGSPGSKGEDGL
PGLPGLPGHPGHDGDEGLRGDRGSPGLPGDPGFPGRPAECLIGLPGLPGGQGATGPPGGR
GLQGSKGNLGPPGLSIPGIYGRPGEPGLVGLQGNTGLPGPKGQSGRPGISGLPGARGDPG
AMGLLGIPGPPGMAGRPGSPGIRGSPGFPGIKGRKGFLGEKGETGDKGFPGPSETLVGIG
DKGERGLKGAQGRMGARGEKGDVGVQGPPGVDGSEGIPGLPGAKGFMGLPGTPGGQGFPG
ALGNQGDMGIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGD
PGPPGVFGSKGEKGSEGHPGLTGVPGPHGVRGETGGAGIPGKCGPPGDMGDKARQGRPGQ
PGVPGPPGAVGVPGKHGLVGERGTQGQDGMPGPPGVKGEPGPPGRGIPGVRGIPGRRGIK
GDMGLPGFPGPPGAKGQQGDQGPIGPPGLVGLPGFQGATGMAVTGQKGNRGIPGAHGRPG
APGFPGLPGLSTLSMKGSKGVRGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGHPGF
LGFPGVKGEKGNQGPPGPQGAEGPRGPKGQHGPPGVSGKTFSIPGSKGPPGLPGIPGTPG
DQGVQGIPGLQGPKGVKGLPGRFGHPGHPGLPGPKGDRGFPGQRGQPGLIGFPGLQGLPG
SPGTIVAGPTRKGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGS
CLQRFSTMPFLFCSPNDVCSFASRNDYSYWLSTTVVMPPDMAPISGRALEPQISRCVVCE
GAAMVIAVHSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAVP
FIECHGRGTCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGQLENIISRCQVCMRRPI
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagagtatcggcaacacagtgtgcgtcaagattccacaggctttctgtgga
tggacgctgtcaattacggacacggtgagcatgctgcccttgccgaactgtgtatgcaaa
ggtaaaagtccctgcttttgtgatagcacaaaaggtagtaagggtgaaaaaggctttcct
ggtgttccaggtccacctggtcaaagaggctttcctggtccagaagggcctccagggcca
cagggaccaaagggttctccagggtttacaggcttagttggacccaaaggtatacgagga
ctcccaggaatacctggattttcaggtcctccaggccttcctggtgaaccaggagctgtt
ggtcctcctgggctcccgggtgttccaggatgcaacggcacaaagggtgaccaaggattt
ccaggtcctccaggccgaagaggtgctccaggccttccaggagttgttggtatcaaagga
gagaaggggtgccctgcagagggatatagccaagagtatggtgcaaaaggtgatcctgga
ttaccagggatgccaggtctccagggtgcccagggtgctcaaggatatcctggggaactt
ggaccacagggccctccaggagctttaggcatgcctgggaaaccaggacctcctggacct
aagggtcttatgggactgaaagtaataggagccaaaggaagaaagggtgacactgggtta
actggaccccctgggcccccaggaactgttattgtgacgttaagtggaccagacaacatg
acggacttgaaaggagaaaaaggagaaaaaggatcaagaggacccccagggccaatgggg
tttacagggccggttggtgactctctaagtgaaaagggtgaccaaggagaaccaggagca
cagggaaagcctggaaaagaaggtgccccaggtccacctggtttaccgggacagaagggt
gaacagggcaagccaggactgcctggaaggcaaggagctaaggggatgaaaggaaaccct
ggtccacctggagcttgtggtcgaactgagtattatgattatgtggctggtgaaaaaggg
gatgaaggaccccccggacctccaggaccaaaaggtcaacgtggcatgcctgggccacag
ggtcctccaggagctgctggtagaccaggtgtgtcaaggcctggtctgagaggtccccca
ggatttcctggaccaaaaggaacaaaaggagagagaggacaaactggcttgcatattgta
ggccctccaggactgcctggtattactggcaggcctggctctgttggattaccaggtcct
ccaggagaaccaggtagagtaacatttggaactggcctaccaggatttcctggagagcca
ggttgtacaggacctccaggacctccaggagatactggcatgagaggtgatgatgctggt
gtgtgtactgattgtagctacattccgggaatgcctggtcttcctggttctcctgggcct
cgtggtcaggatggcatgcctggtagggaaggaacaacaggtccaaaaggttctccaggt
tctccaggagcatcagggtttccaggggctcaaggacctcaaggttttagaggagagcaa
ggacgtaaaggatcaaaaggtgagccaggatatgtacatccagaagggccaaaaggtgag
cgaggagatccaggagccatgggagacaaaggaagaagaggctcaagtggatttatggga
agacctggctctaaagggtccaagggttctaaaggtgaagagggattggctggatcaaaa
ggagatagaggactacctggattgcctggtagacttgggcttcctggagaaatgggcctt
cctggactgccaggttatggaccacaaggagtaagaggttttaaaggctctaaaggaatc
cgtggaccacctggattacctggagaagctggtctgaaaggagagaccagtagggcaact
ccattacctgcattgcctggacctcagggaccacatggtttacctggacccccaggaatg
cctggtagggttggagcaagaggtcagccaggtgatccaggacattcaggaccaacaggt
gacacaggttttccagggcttgggtttcctggaaacccaggtccaaaaggagacaaagga
cttgcaggaggcagagggccaccaggttgtgaaggaaagactggagatccaggccgaact
ggaaacctaggacaaccaggacaaaagggtgagccaggcatggttattcctggagagcca
ggaagaatgggttcaccaggaggtcatggcagtcctggctcaaaaggtgaagatggactt
ccaggactcccaggcctaccagggcatcctgggcatgatggtgatgagggactaagagga
gatcgtggctcgcctggacttcctggagacccaggttttcctgggagacctgctgaatgt
cttattggcctgccaggtttgccaggtggccagggagctacaggcccaccaggaggaaga
ggtttacaaggttcaaaaggaaacctaggtcctcctggtctgagtatcccgggaatctac
ggaaggcctggggaacctggactagtaggtcttcagggaaatacgggattacctggtccc
aagggacagtctggaagaccagggatctctggtttgccaggagcaaggggagatccaggt
gcaatgggactgttaggaattcctggaccccctggcatggctggaagaccaggcagtccg
ggaatcagaggttctcctggcttcccaggaataaagggaagaaaagggtttcttggagaa
aaaggcgaaacaggtgataaaggttttcctggaccatctgagaccttggttggtattggg
gacaaaggagagcgaggtttaaaaggagctcaaggccgaatgggtgcaaggggagaaaaa
ggagatgttggtgtgcagggtcccccaggtgttgatgggtctgaaggaatacctggtcta
ccaggagccaagggatttatgggtcttccagggactcctggaggacaaggattcccaggt
gcactcggaaaccaaggggacatgggaattccaggtccaaaaggccagaaaggatctcca
ggctttccaggaccatcaggtgaccctggtccaccaggctatggtggctttccaggtgac
aaaggagatcctgggtacccatctgctgggcctccaggagaacctggtccaaagggagat
ccaggtcccccaggagtttttggcagcaaaggagaaaagggctccgagggccatccagga
cttacaggagtaccaggaccacatggagtcagaggggaaactggaggtgcaggaatccca
gggaagtgtggaccccctggagatatgggtgataaagcacgccagggccgcccaggacag
ccgggagtcccaggccctcctggtgctgttggagtcccaggaaaacatggacttgtgggg
gaaaggggtactcaaggtcaggatggtatgcctggtcccccaggagtaaagggagaacca
ggaccaccagggcgagggatccctggtgttcgaggtattcctggacgtagaggaatcaaa
ggagacatgggactgcctggttttcctgggcctccaggtgcgaaaggtcagcagggagat
caaggacccattggaccccctggcttagtggggttacctggatttcaaggtgccacaggc
atggcagtcactggccagaaggggaacagaggtattcctggtgcacatggaagaccaggt
gctcctggttttccaggccttcctggtctttccactctcagcatgaaaggaagcaaaggt
gtccgaggggcagatggaataccagggccaaggggcccagctggtgacattggccctcct
ggtcccaaaggcatagaaggtcgatcaggctatcctggtgctagagggcaccctggattt
cttggattcccaggtgtaaaaggagaaaagggtaatcaaggacccccaggaccacaaggt
gcagaagggccaaggggaccaaaaggccagcatggcccacctggagtatctggaaaaaca
ttctccatcccaggaagcaagggtcctccaggactgccaggaatcccaggaacaccaggt
gatcaaggagttcaagggattcctggactacaaggacctaaaggagtaaaaggtctacca
ggacgttttggtcatccaggtcatccaggattgcctggtccaaaaggagacaggggattt
ccaggacaaagaggacaacctggattgattggctttccaggtctgcaggggttacctgga
tcaccaggtactatcgttgctgggccaacaagaaaaggatttatctttactcggcatagt
cagacaacaaagattccttcatgcccacatgggacatcccagatctatgttggctattca
ctgctttttgtacaaggaaatgaacgagcacatggacaagatcttggaacagctggtagc
tgcttgcagaggttcagcaccatgccattcttgttctgtagcccaaatgatgtttgtagc
tttgcttctcgtaatgactactcctactggctgtccaccacagtggtgatgccaccagac
atggcacccatttctggcagggcactagagccccagataagcaggtgtgttgtctgtgaa
ggagctgcaatggtaatagcagttcacagccaaactactgtagttcctgcatgtccagat
ggctggatgtctctctggaagggtttttcttttgttatgtacacaagtgccggctcagaa
gcttctggccaagcattggcatctcctggatcttgtctggaagaatttcgggctgtcccg
tttatagagtgccatggcagggggacgtgcaactactacacaaattcctacagtttctgg
ttggcgtcattaaatccaagaagaatgttcaggagacctgtgccacagactttgaaagca
ggacaactagaaaatatcatcagtcgttgtcaggtctgcatgaggagaccaatctaa
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