KEGG   Ficedula albicollis (collared flycatcher): 101810814
Entry
101810814         CDS       T02815                                 
Symbol
COL4A3
Name
(RefSeq) collagen type IV alpha 3 chain
  KO
K06237  collagen type IV alpha
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab04382  Cornified envelope formation
fab04510  Focal adhesion
fab04512  ECM-receptor interaction
fab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:fab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101810814 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101810814 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101810814 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    101810814 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fab04147]
    101810814 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:fab00536]
    101810814 (COL4A3)
Exosome [BR:fab04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101810814 (COL4A3)
Glycosaminoglycan binding proteins [BR:fab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101810814 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101810814
NCBI-ProteinID: XP_016155928
LinkDB
Position
9:10252474..10310651
AA seq 1678 aa
MDYKSIGNTVCVKIPQAFCGWTLSITDTVSMLPLPNCVCKGKSPCFCDSTKGSKGEKGFP
GVPGPPGQRGFPGPEGPPGPQGPKGSPGFTGLVGPKGIRGLPGIPGFSGPPGLPGEPGAV
GPPGLPGVPGCNGTKGDQGFPGPPGRRGAPGLPGVVGIKGEKGCPAEGYSQEYGAKGDPG
LPGMPGLQGAQGAQGYPGELGPQGPPGALGMPGKPGPPGPKGLMGLKVIGAKGRKGDTGL
TGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSLSEKGDQGEPGA
QGKPGKEGAPGPPGLPGQKGEQGKPGLPGRQGAKGMKGNPGPPGACGRTEYYDYVAGEKG
DEGPPGPPGPKGQRGMPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGTKGERGQTGLHIV
GPPGLPGITGRPGSVGLPGPPGEPGRVTFGTGLPGFPGEPGCTGPPGPPGDTGMRGDDAG
VCTDCSYIPGMPGLPGSPGPRGQDGMPGREGTTGPKGSPGSPGASGFPGAQGPQGFRGEQ
GRKGSKGEPGYVHPEGPKGERGDPGAMGDKGRRGSSGFMGRPGSKGSKGSKGEEGLAGSK
GDRGLPGLPGRLGLPGEMGLPGLPGYGPQGVRGFKGSKGIRGPPGLPGEAGLKGETSRAT
PLPALPGPQGPHGLPGPPGMPGRVGARGQPGDPGHSGPTGDTGFPGLGFPGNPGPKGDKG
LAGGRGPPGCEGKTGDPGRTGNLGQPGQKGEPGMVIPGEPGRMGSPGGHGSPGSKGEDGL
PGLPGLPGHPGHDGDEGLRGDRGSPGLPGDPGFPGRPAECLIGLPGLPGGQGATGPPGGR
GLQGSKGNLGPPGLSIPGIYGRPGEPGLVGLQGNTGLPGPKGQSGRPGISGLPGARGDPG
AMGLLGIPGPPGMAGRPGSPGIRGSPGFPGIKGRKGFLGEKGETGDKGFPGPSETLVGIG
DKGERGLKGAQGRMGARGEKGDVGVQGPPGVDGSEGIPGLPGAKGFMGLPGTPGGQGFPG
ALGNQGDMGIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGD
PGPPGVFGSKGEKGSEGHPGLTGVPGPHGVRGETGGAGIPGKCGPPGDMGDKARQGRPGQ
PGVPGPPGAVGVPGKHGLVGERGTQGQDGMPGPPGVKGEPGPPGRGIPGVRGIPGRRGIK
GDMGLPGFPGPPGAKGQQGDQGPIGPPGLVGLPGFQGATGMAVTGQKGNRGIPGAHGRPG
APGFPGLPGLSTLSMKGSKGVRGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGHPGF
LGFPGVKGEKGNQGPPGPQGAEGPRGPKGQHGPPGVSGKTFSIPGSKGPPGLPGIPGTPG
DQGVQGIPGLQGPKGVKGLPGRFGHPGHPGLPGPKGDRGFPGQRGQPGLIGFPGLQGLPG
SPGTIVAGPTRKGFIFTRHSQTTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGS
CLQRFSTMPFLFCSPNDVCSFASRNDYSYWLSTTVVMPPDMAPISGRALEPQISRCVVCE
GAAMVIAVHSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAVP
FIECHGRGTCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGQLENIISRCQVCMRRPI
NT seq 5037 nt   +upstreamnt  +downstreamnt
atggattacaagagtatcggcaacacagtgtgcgtcaagattccacaggctttctgtgga
tggacgctgtcaattacggacacggtgagcatgctgcccttgccgaactgtgtatgcaaa
ggtaaaagtccctgcttttgtgatagcacaaaaggtagtaagggtgaaaaaggctttcct
ggtgttccaggtccacctggtcaaagaggctttcctggtccagaagggcctccagggcca
cagggaccaaagggttctccagggtttacaggcttagttggacccaaaggtatacgagga
ctcccaggaatacctggattttcaggtcctccaggccttcctggtgaaccaggagctgtt
ggtcctcctgggctcccgggtgttccaggatgcaacggcacaaagggtgaccaaggattt
ccaggtcctccaggccgaagaggtgctccaggccttccaggagttgttggtatcaaagga
gagaaggggtgccctgcagagggatatagccaagagtatggtgcaaaaggtgatcctgga
ttaccagggatgccaggtctccagggtgcccagggtgctcaaggatatcctggggaactt
ggaccacagggccctccaggagctttaggcatgcctgggaaaccaggacctcctggacct
aagggtcttatgggactgaaagtaataggagccaaaggaagaaagggtgacactgggtta
actggaccccctgggcccccaggaactgttattgtgacgttaagtggaccagacaacatg
acggacttgaaaggagaaaaaggagaaaaaggatcaagaggacccccagggccaatgggg
tttacagggccggttggtgactctctaagtgaaaagggtgaccaaggagaaccaggagca
cagggaaagcctggaaaagaaggtgccccaggtccacctggtttaccgggacagaagggt
gaacagggcaagccaggactgcctggaaggcaaggagctaaggggatgaaaggaaaccct
ggtccacctggagcttgtggtcgaactgagtattatgattatgtggctggtgaaaaaggg
gatgaaggaccccccggacctccaggaccaaaaggtcaacgtggcatgcctgggccacag
ggtcctccaggagctgctggtagaccaggtgtgtcaaggcctggtctgagaggtccccca
ggatttcctggaccaaaaggaacaaaaggagagagaggacaaactggcttgcatattgta
ggccctccaggactgcctggtattactggcaggcctggctctgttggattaccaggtcct
ccaggagaaccaggtagagtaacatttggaactggcctaccaggatttcctggagagcca
ggttgtacaggacctccaggacctccaggagatactggcatgagaggtgatgatgctggt
gtgtgtactgattgtagctacattccgggaatgcctggtcttcctggttctcctgggcct
cgtggtcaggatggcatgcctggtagggaaggaacaacaggtccaaaaggttctccaggt
tctccaggagcatcagggtttccaggggctcaaggacctcaaggttttagaggagagcaa
ggacgtaaaggatcaaaaggtgagccaggatatgtacatccagaagggccaaaaggtgag
cgaggagatccaggagccatgggagacaaaggaagaagaggctcaagtggatttatggga
agacctggctctaaagggtccaagggttctaaaggtgaagagggattggctggatcaaaa
ggagatagaggactacctggattgcctggtagacttgggcttcctggagaaatgggcctt
cctggactgccaggttatggaccacaaggagtaagaggttttaaaggctctaaaggaatc
cgtggaccacctggattacctggagaagctggtctgaaaggagagaccagtagggcaact
ccattacctgcattgcctggacctcagggaccacatggtttacctggacccccaggaatg
cctggtagggttggagcaagaggtcagccaggtgatccaggacattcaggaccaacaggt
gacacaggttttccagggcttgggtttcctggaaacccaggtccaaaaggagacaaagga
cttgcaggaggcagagggccaccaggttgtgaaggaaagactggagatccaggccgaact
ggaaacctaggacaaccaggacaaaagggtgagccaggcatggttattcctggagagcca
ggaagaatgggttcaccaggaggtcatggcagtcctggctcaaaaggtgaagatggactt
ccaggactcccaggcctaccagggcatcctgggcatgatggtgatgagggactaagagga
gatcgtggctcgcctggacttcctggagacccaggttttcctgggagacctgctgaatgt
cttattggcctgccaggtttgccaggtggccagggagctacaggcccaccaggaggaaga
ggtttacaaggttcaaaaggaaacctaggtcctcctggtctgagtatcccgggaatctac
ggaaggcctggggaacctggactagtaggtcttcagggaaatacgggattacctggtccc
aagggacagtctggaagaccagggatctctggtttgccaggagcaaggggagatccaggt
gcaatgggactgttaggaattcctggaccccctggcatggctggaagaccaggcagtccg
ggaatcagaggttctcctggcttcccaggaataaagggaagaaaagggtttcttggagaa
aaaggcgaaacaggtgataaaggttttcctggaccatctgagaccttggttggtattggg
gacaaaggagagcgaggtttaaaaggagctcaaggccgaatgggtgcaaggggagaaaaa
ggagatgttggtgtgcagggtcccccaggtgttgatgggtctgaaggaatacctggtcta
ccaggagccaagggatttatgggtcttccagggactcctggaggacaaggattcccaggt
gcactcggaaaccaaggggacatgggaattccaggtccaaaaggccagaaaggatctcca
ggctttccaggaccatcaggtgaccctggtccaccaggctatggtggctttccaggtgac
aaaggagatcctgggtacccatctgctgggcctccaggagaacctggtccaaagggagat
ccaggtcccccaggagtttttggcagcaaaggagaaaagggctccgagggccatccagga
cttacaggagtaccaggaccacatggagtcagaggggaaactggaggtgcaggaatccca
gggaagtgtggaccccctggagatatgggtgataaagcacgccagggccgcccaggacag
ccgggagtcccaggccctcctggtgctgttggagtcccaggaaaacatggacttgtgggg
gaaaggggtactcaaggtcaggatggtatgcctggtcccccaggagtaaagggagaacca
ggaccaccagggcgagggatccctggtgttcgaggtattcctggacgtagaggaatcaaa
ggagacatgggactgcctggttttcctgggcctccaggtgcgaaaggtcagcagggagat
caaggacccattggaccccctggcttagtggggttacctggatttcaaggtgccacaggc
atggcagtcactggccagaaggggaacagaggtattcctggtgcacatggaagaccaggt
gctcctggttttccaggccttcctggtctttccactctcagcatgaaaggaagcaaaggt
gtccgaggggcagatggaataccagggccaaggggcccagctggtgacattggccctcct
ggtcccaaaggcatagaaggtcgatcaggctatcctggtgctagagggcaccctggattt
cttggattcccaggtgtaaaaggagaaaagggtaatcaaggacccccaggaccacaaggt
gcagaagggccaaggggaccaaaaggccagcatggcccacctggagtatctggaaaaaca
ttctccatcccaggaagcaagggtcctccaggactgccaggaatcccaggaacaccaggt
gatcaaggagttcaagggattcctggactacaaggacctaaaggagtaaaaggtctacca
ggacgttttggtcatccaggtcatccaggattgcctggtccaaaaggagacaggggattt
ccaggacaaagaggacaacctggattgattggctttccaggtctgcaggggttacctgga
tcaccaggtactatcgttgctgggccaacaagaaaaggatttatctttactcggcatagt
cagacaacaaagattccttcatgcccacatgggacatcccagatctatgttggctattca
ctgctttttgtacaaggaaatgaacgagcacatggacaagatcttggaacagctggtagc
tgcttgcagaggttcagcaccatgccattcttgttctgtagcccaaatgatgtttgtagc
tttgcttctcgtaatgactactcctactggctgtccaccacagtggtgatgccaccagac
atggcacccatttctggcagggcactagagccccagataagcaggtgtgttgtctgtgaa
ggagctgcaatggtaatagcagttcacagccaaactactgtagttcctgcatgtccagat
ggctggatgtctctctggaagggtttttcttttgttatgtacacaagtgccggctcagaa
gcttctggccaagcattggcatctcctggatcttgtctggaagaatttcgggctgtcccg
tttatagagtgccatggcagggggacgtgcaactactacacaaattcctacagtttctgg
ttggcgtcattaaatccaagaagaatgttcaggagacctgtgccacagactttgaaagca
ggacaactagaaaatatcatcagtcgttgtcaggtctgcatgaggagaccaatctaa

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