Ficedula albicollis (collared flycatcher): 101810954
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Entry
101810954 CDS
T02815
Symbol
RBBP6
Name
(RefSeq) RB binding protein 6, ubiquitin ligase
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101810954 (RBBP6)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101810954 (RBBP6)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
U-box type E3
101810954 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101810954
NCBI-ProteinID:
XP_005054082
UniProt:
U3JMA7
LinkDB
All DBs
Position
14:complement(8009714..8038841)
Genome browser
AA seq
1786 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKSLETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQQLP
PPPPPPPPPLMRQTITRTLQPLMRPALARQQDPLMIPLASLASRSALSSLGPGPSMAAGL
PVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPLMAAAELSKSSPLSISSLLEEK
GYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPS
LPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAP
ANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKE
LMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYS
RSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPSKRAVPQG
EAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQ
PRPPVNRENFSPERFGPPGTRRENSPYARGRREEYAAGQSHRNRNVAGNYPEKPGREGHG
IKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNVELLEGARKPREPVPAEDA
KTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIEKTKRKVEVAAAP
KKDNVAKPAKAPQEKADPDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKAVGTPRK
AHPKVTKDHPETRPAKEEKAKKEHPKEAKAEKPSSKEDKSKKPAEKSKLSDAKLEKRKRK
AEEKADKEHEATSAKAYKPEAAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKL
NRETGKKIVSAENVPPGKEAVEKPEPSSSKVKAEKAKGKARRKVTAADGASSTLVDYTST
SSTGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEE
DIKTTTQVPPTVGKPTSVIKPVSAKAPNPLKHTEKESEPLEKIQKSAKEASYESAQHDAK
SSKSSVLSEKGKTKDRDHSLSDKDSSEKRKSSAQPEKEHSERAAEQGNGKAISQSSKDGR
SSEKHDSGRGSAAKDFTPNRDKKSEHDGSREHSSSKRRDEKSESARRKDSPSRIRDSTAA
QKSKPREERAEPPKKGPAEAKRSSYSPPRERKPPEHKAGHDPKRPAEEHKPPDKNPAKEK
EKEKEKHVPEVKSNKEKEPGGNKAPVKQDSPEVKVEKESVAAQADKGAVKPKAPASSAAR
LSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVEKAKEEAAAPAPA
EQPEVGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHK
KHKKHKKHMGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacaccgatgat
agtgctctgattcccaagaactcatcggtgattgtgaggagaatccccattggaggagtt
aaagctaccagcaaaacttacgttatgactcctaaatcgcacaaaagcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcgtacacctgttttcgctgtggcaaacct
gggcactacataaagaactgtccaacgaatggggacaaaaatttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatacgcaattccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcctca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgaca
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctgctggagtctgaggagcacacatgccctacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaaaaatgaaactggt
tacacaaaaaggctccgtaagattcagcagcagcagcaacagcagcagcagcagctgccc
ccaccaccccctcctcctcctcccccgctgatgcggcagacgataacgcgcacgctgcag
ccgctgatgcggccggccctggcgcgccagcaggacccgctgatgatcccgctggcctcg
ctggcctcccgctccgccctctcctccctgggccccgggccgtccatggcagctgggctg
cccgtcaacccctcgtctgtggttgtgtctgacctccctccagcagtgtccctctctctc
cgtggggagaagcctgatgggccttttcgtgatgccgatgctgttctgcctcctctgatg
gctgctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagagaag
ggctatcaggttcctgtcctgagacaaccagcgataccaagtcttctgggccctcaagga
caatcaatacccacaactggtcatccaatgagagctggtgcacttcgcaggccaggctgg
gaactttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggccccatca
ctgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccacca
ccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagtttcca
cctgggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagctcct
gcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacaccatc
ccaacgacacaagcacctcctctctctagggaggagttttacagagagcaacggaggctt
aaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaa
ttgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtct
ccctatagtgcttcatcttactctagaagctcgtacacctactccaagtctcgctcaggt
tcgtcgcgctcccgctcctactcgcgctcctttagccgctcccattcccgctcctactcg
cgctcgccgccgtaccagagacgaggcaaaggcaagagccgcaactaccgctcccgctcg
cgctcgcacggctaccaccgctcccgctcccgctcgcccccgtaccggcgctaccactcc
cgctccaggtcccccgtgttccggggccagtcccccagcaagcgcgcggtcccgcagggc
gaggccgagcgcgagtacttcaaccgctaccgagaggtgcccccctacgacatgaaggct
tactacggccgctcggtggacttcagagaccccttcgagaaggagagatacagagagtgg
gagaggaactacagagagtggtacgagaagttttacaagggctacgccgtgggtgctcag
ccacggcctccggtgaacagagagaacttctctccagaaaggtttggcccgcctgggacc
agacgagagaattcaccctatgctcggggacggagggaggagtacgctgctgggcagagc
cacaggaatcgtaatgtagctggaaactaccctgaaaagcctgggagagagggccatggc
atcaaagatcctacaaaatcaaaagaaaaggaggtggaaaatccgctgggagatggcaaa
ggcaataaacataagaaacatcggaagagaagaaaaggggatgagaatgaaggatttcca
aatgttgagctgttagaaggggcaaggaaaccaagagagccagttccagcagaagatgct
aaaacagactctctattcatgctgccaagcagggatgatgccacccctgtaagggatgag
cccatggaagcagattccattgctttcaaaccagtgtctgaaaaggagaaaaaagagaag
gataagccaaaagcaaagattgagaaaacaaagcggaaagtggaagtggcggctgctccg
aaaaaagacaacgtagcaaaaccagctaaagctccccaggaaaaggctgaccccgatcgt
gaaaaatctcctcgaacggagcctcctgtgaaaaaagtcaaggaagagctgccaaagaca
gacagtgttaaaacctcttcctctcagaaggatgagaaggctgttggtacaccacggaag
gctcatcccaaagtgacaaaggatcacccagaaaccagaccagccaaggaggagaaggca
aagaaagagcatcctaaagaagccaaggcagagaaaccctccagcaaggaggataagtca
aaaaaacctgctgagaaaagcaaactttctgatgccaaacttgagaaaagaaaaagaaaa
gcagaggaaaaggctgataaagagcacgaagccacttctgcgaaggcctataaacctgaa
gccgcagaattgaaaacatcacccaagggcaaggctgagcctgagggggagaaaggagaa
cggacaccagaaaaggataaagctgcttttcttaacaacccgtccaaaaagattaaactg
aaccgagaaactggaaaaaagattgtgagcgcagaaaatgtgccacctggaaaagaggct
gtggagaaacctgagcccagcagcagcaaagttaaagcggaaaaggcaaagggaaaagca
aggaggaaagtcacggcagctgatggtgccagctcaactcttgtggattacaccagcacg
agctccactgggggaagccctgtcaggaaacctgaggagaagccagacaccaaacgaact
gtcattaagaccctggaggaatataacaatgacataacagcccctgctgaggatgtcatt
atcatgattcaggtccctcagtccaaatgggataaagatgactttgagtctgaagaggaa
gacatcaaaaccaccacccaggtgcccccaactgtaggaaaacccaccagtgttatcaaa
cctgtgagtgcaaaggcaccaaaccccctcaaacacactgaaaaggagtcagagcctctg
gagaaaatacagaaatctgcaaaagaggcgagttatgaaagcgcccaacacgatgccaag
agttcaaaaagttccgtgttgagtgaaaaaggtaaaaccaaagaccgggatcattctttg
tcagacaaggacagttctgagaagaggaagagcagtgctcagccagaaaaagagcactca
gaacgtgcagctgaacaaggaaatggaaaagctatctctcaatcttccaaagatggcaga
tcttcagagaagcatgatagtggccgtggctccgctgcgaaggacttcactcccaaccga
gacaagaagtctgagcacgatggcagcagggaacattcgagctccaagcgcagggacgag
aagagcgaatcagcgcggaggaaagactccccatcccggatcagagactccacagcagcg
cagaagagcaaacccagagaggagcgtgcggagccgcccaagaagggccctgcagaggcc
aagcgcagcagctacagccccccccgggagcgcaaaccccccgagcacaaagccgggcac
gaccccaagcgccccgcggaggaacacaaacctccggataaaaacccggccaaggagaag
gagaaagagaaggagaagcacgtaccagaagtaaagagcaataaggagaaagagccaggt
gggaataaagcaccagtgaagcaggactcaccagaagtgaaggtggagaaggagagcgtg
gcggctcaggccgataaaggcgcggtgaagcccaaggcgccggcgagcagcgccgcgcgc
ctctcgtccgacctcacccgcgagaccgacgaggccgcctttgtgcccgactacaacgag
agcgacagcgagagcaacgtgtccgccaaggacgaggaggccgcagggaaaacgcccaaa
gaagccaaggaaaaggctgtggagaaggcgaaggaggaggcggcggccccagctcccgcc
gagcagcccgaggtgggcaggagccagagccagagcagccccagcgtcagccgcagccgc
agccacagcccctccgagagccagacacggagccacagcagcagtgccagctcaggggag
agccaggacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcacaag
aaacacaagaagcataagaaacatatgggaaatgaaacagaattggaaaagagccaaaaa
cacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagacgaccaaaaa
gtgaaatctgtcacgacataa
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integrated database retrieval system
